Contig Data
morexGenes
Links



Map Locations of contig_57527 (4600 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57527

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70164 1 1264 bp None Available Available None
MLOC_70163 1 443 bp AK355665 Available Available None





CDS Structure of MLOC_70164






CDS Structure of MLOC_70163






Contig Sequence (4600 bp)

>contig_57527 4600 assembly3_WGSMorex_rbca.fasta
AGCTGCCGCCGCACGGCGACCGCGCCAGGGCCATCGCCGTGCGCCCCGCCCGCGTCGCGG
CGGCCGCAGAGCGCGCCCACGCGCACGGTGGCGCCGGCGCCGGAGGCCGCGGCGAGAAGA
TCGTGTGGAGAGTGGAAGTGTAATAGTAATAATAAGGAGCGGAGCGAAGGATTAGCCGCA
GTTGCTAGCTAGTCAGCCTGCCTGCTGGTAGAGATAAATTAAATTAAAGCAGTCCAATTT
GTTCATACTACTCCTAGAGATCGAGCTCGATTTTCCTCTGCCTGCCCAGTGAGTGATCAT
CAGACACTTCTACTCCAGTTCTAACTCGCTGCTTGCTTCGGGAGCTTCATCCATCCATCC
ATTTCCTCTGTAAATAGGAGCATAAATGTTGATTCTGAGGCCGCTCGTGTCATCTTTATC
CTCTGAATGCAGGAATTTTAGTGCAACCTTTTCTCTGCAACCCTACTGACTGACTCTTGT
AGGCCATCCGGAGCTGTACTGCTACTAATTGTGGGTTCGTTTTACCGTGGGCTGGCTGCC
ATTCCTTGGTAGTGCCACTTGACAGATGATGCTCGATACCTGGTACTGATGCTTGTTTTG
AGCTTGGTGCCTCTGCTTTTCTCTTCCGAAGTAAGAGCAGAGTGTTCGTTTTCAAGTAAA
AAAAACAACACGGCCAGATAGATCGGCGTGCATTAGCACATTCGACATGACACTCCATCT
GAAAGATGCAAGTTGCTACTGACTACTGGTACTGGAGTACTAGTATAGATCTTGCTTAGA
AGTTAACCAAATACTATAGCTGTTTGGCATCTCTCCCCTCTTGTGTTGTTTGGTAGGTCC
AGGAGAGGGACGACACGACGCACACGGGATGGCATCGGATGCTGAGATCAGCAGCACATC
ACACCGCCATTCAGCAGCAGCGCACTTGGTCGCCTACTCCGTTCCCGTTGGACCATCGCA
CGGCGGGGCCCCCCGGACTGACCGGTCAGAACGGCCCGCCTGCAGTGGCGCCACGGTGCT
GCAGGCTGGCGCGGTGGCATCGCATGGCATCTACTGCTGCACCGTGGTTTATTTTCTCAT
CTTTATTGACCAACGACCTGACGGCCTGAGCACAGGCCATACACATGCAAGGCAAGCCTG
CCAAAACTAATGGAGTGCGTATGTTTTCTTCTTCCTATAATATGCCCGTCGACTGCTGCT
TGTTCGAAGAGGCTTCCGTTTTTTTACCCCTTCCATGCGATGCGACCAGAGGAGGAGAGG
AGGAGGTGGAGGAGGAAGGCGCCGGGAAGGAGTGACACGACGGTGGTGGTGCAGTGCAGG
AAGTCAGCTGGTGATGGGGGGGTGCCCGTTTGCGCAGGCAAATTATTGTGGCCTTGGGAG
GCGAGCACGCTGTCCGATCGGTGACTAGTACTGGCATGATGGTGCTCGCCCTTGCTTGTC
CCACCAACGTTGCCTGGATCAGTCACTTCCTCTTGCGCTCGCTTTGCTTTTTTCCTTTTC
TTTTTTGCGTGCGCCACGTCCAGGTCGCGTGAACAATGAGTAGCTCCGGTACCAGTGGTA
ATCGAACCATACGCTGCGTACAATATACAGTACAACATACGAGGTGCACGGGCATCTCCA
AAGCCGACCCATACACATCGCGCGACAATCCGGATCACATGGTTGGAATGGTCCAGGGAA
GGGAGCCGCCATGGAATCGTAGCACCCTGCCTCTCGTGGAGCTCGCCGCCTCCAGCTACC
TCTCCATTGATCAGTCCGACGCCTCCGGTCAGATCTTCCTCGATCCGTCCGCCACGCGTC
GGATCCACGCCGGAGCAGCCGGATGCGCCGCCAGGGAACCGCATCACCGCATGGCCTTGG
AGCTCGCCACCTCGAGCTACCTCTCCATTGATCAGTCTGACGCCTCCGGCCACATCTCCG
TCGATCCGTCCGCCACGCGTCGGATCCACGCCGGAGCAGCCGGATGCGTTGCCAGGGAAC
CGCATCACCCCATGGCCTTGTAGCCCGCTGCTTCCAGCTACCTCTCCATCGATCCGTCTG
TCCCGCTGCCGGATTCGTTGACTGCTCAGCCCGCCATGGGTCTGTGCCTCGATCTGCCTG
CCCCGTCGCTCGATGCACGCGGGAGCAGCTGGGCTGCGGGTTCGATCCGTCTGCCCCGTC
GCTGGATGCATGCGAGAGCAGCTGGGCTGCGGGTTGATTTATTAGAAACTGGGGAGAAGG
GGGTTTATGTAAAACTGAATTGTTTTTCCCACTTAAATTGGTAGTGCGGGTCGAATATGT
ACAATGTCAGGGGCTTTTCTACAAAACAGCCACGACGGACGGCAGAAACCGTATTTACTT
TATTATTAGGAAGAGATTGTATTTCTATACCGATTCGTTCAGTGTTTCATTTTTTTTTCT
GTAAACACGAAGCAAACGCAGGGAGGGTTGTTTGCACGCGGTCGGACCTACCGTAACGTC
CGCACATGTTGAATATTGAAAACCGTTAGAGCAACTCCAACCGACCGATACATTTTATCG
TCGCACACATAAAATAGAGCCTAACACGTTGATTGAAGCAGACGCGCGTTCATTTTTTTG
TCCCTGCACGATTTATTCCAGGCTTAAATTTGGGCTGGATTTGCGTCGACGAGGACATGG
GACGGATGCCCGCGTCGCCCGCCCTTTTCTTCTCCCTCACCCGTGAGTCCATGGCACGTA
CATCGTTTTCCTCTCCCCCTTCCCCTCCAACGCTCCCGCCCGCCCCATATCCCACTTTTG
CCGTCGTCGCCACCCAACTGCCCGTAGACTCACCCTCCCAACAGCCTCATTTCCCATCGT
CGTTGTCTCCCTGCTCCACTACTTTGTCTTGTTGGGGCATGAGGCTCCTCATTCACCGGA
TTCTTCGAGGACGCCTGCAAAGTGTTCGGCGCTTTGCCCGCAAGGTACAATTGTACTACG
ACGATGAGTTCTTTTCTACAAGGTTCTTTGTGATTCAGATGATTCTTCATCCAGCGATGA
GGACATCATGGCAGCTGCGTTGATCGTCCATGATCACACAATGTGGAGCGGCCGTAGTTT
AGGGGTTCCGTACCAGGGCATACGCCGACGCTGAATCTCAATCGGGAGAGTGACCATTTC
CTATTTTGGAAGAACTACTTCGAGATGCCAAACTCGCTCTTCAAACATCACATGTTTCGA
TATCGTTTTCGTATGGCTAGACATGTGTTCAACCTTATTCGGGAGGGGGTGGTCGAGTAT
GATAACTATTTTGAGTGTAGGAGGGATACCCTTGAAAAGATTAGCTTCTCCTCTTATGAG
AAATGCACTCCTGCCATTCGGTTGCTTGCATACGGAGTTTGAGATGATCTCATTGATGAG
TATGTTCGAATGAGTGAGTCCACATGCCTTGAGTCCATGTATAGGTTTTGCAAAACTGTC
ATAGTTGTGTTTGAACCGGAGTACTTAAGAGAGCCAACTGCTAATGGTACAACACGATTG
CCCGCAATGAATGCTAGTAGGAGGGTCCCACGGATGCTTGGCAACATAGATTGTATGCAC
TGGAAGTGGAAAAACTGCCCTTCTGCTTGGCAGGGCCATGTCCGAGCTTGCACCGTCCTA
TTTGAGGCCATGGCTTCCCAAGATCTCTGGATTTGGCACTCTTTCTTCAGCATGGCCGGA
TCTCACAATGATATCAATGTGCTCGTGTGATCTCGTGTGTTTGCTAGGATGGCAGAAGGC
AATTTGTTGTCGTTTTCTCACGGCAGATGCCATGGGGTGGCTTATCGAGTGTGGTTGGGG
CCGTAAGAACGTCGGCGGGCTCCGGAAACGGATCGGGGACAAGCGATAAGAGACACATGA
TGTACCCAGGTTCGGGGCCCTTCGTGGGAGGTAACACCCCTAATCCTGCTAGTTTGGTTG
ATGAACCAGATGAGCTTACAATGGTGCTCCTTGAGCTGTGTGATGAAGGAGGAAAAAAAG
TTGGTATCCTTCTGCCTCTTGTGTGTGGTGTATGCACGAGGGATTGGCCGACCCCGTGCA
TGGGGTGGTACCAGGGGTTTTATAGGCCAACCCCCCGCTTATAATAAGAATAAAGGGTAC
CTGGGGGGACCCGGCTGGCAGCCTCTCTAGCCGGCTACATGGGCCCACCGATGGAGTAGT
CTTGTTGCGTGTATGGGCGTGCTGGCTGCACAGTCCTGCCAGGAGCCGGGATCCGCCGGT
CAATCGCTGTCATTGGTGCGTGCTTGTTACGCAGCGGCGTGCGCCGCACTGTGTAGTGTC
GTCTTGCAGTAGCCGACCGCAGTCAGTGGTACGGCCGGCGACACTGTAGCCACGCAGGGG
CAGGTAAAGGAGTGGATGGCGGGCGTGCTGCCACTATGCCGCCTCGATTGGTCGCAATCG
GCAAGGGTCAGTGGTACGTCCGCCACCACTGTAGCCACGCTCGTCAGGTCAGCAGTACTT
GAGCCGCTGTAGCCATGCCTGTGATGATGTGCCCCCGACGCGTTTGTCACGGTGATGTGA
CTAGAGCTGACCCGCCGACAAGCGGGACACAGTCGAGCCGGACGGAGAGTGGCCTTGCCC
CGAGCCGGCTCGGTTGCGTGATAACCCACAAGTATAGGGG