Map Locations of contig_57509 (3918 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_57509

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70152 1 3096 bp AK354295 Available Available None





CDS Structure of MLOC_70152






Contig Sequence (3918 bp)

>contig_57509 3918 assembly3_WGSMorex_rbca.fasta
CGATCCTGCCTTGTGTGGCCACATATCCATCTCAACATGCGCCGCCACACCTAACTGTTG
CACATGTCTCCTTTTGTTGCATAATTCAAATCATAGTTCAAAAAGGGCTTTGGCTCTAGG
CAATAGCAAAGCGCCTAGTGCTTAAAAGCGCTTGTTGTGCACATAATTTCACTTAAGCAT
GCGCTTTGGTCAGAAAAACGCAAGGTGGTGGCAAAACACACGTTAATGCCTAGCGCTGTT
TTTAACTTCGATACAAATACCAAATAATCACCTTCTTTGTAGTAAAACTGACAAGGACTA
AATTTTACTTTAAAAGTAACCACATGAATCTACAGAGTGGTGTCTTGTGTGTACCGAACC
AATGATAATGATACATAGGCGTACAGACATGTCAACGGATGTATCTAGCGTCAACTAATT
CCGGCCGTAGGGAATAGTTTTGTAACGTATGGGTCAATGGCTGTCTTCAACTCTGCAATT
GGCAATTGAACTATATGATGATAAAAATTTCTCTTAACTCTTAAGTGCCGAAAGTGCCAT
GGCATGAAGTGTCAATTTTAATAAATAAGTAAATAAACAGTATCACACTCTCAAGCAACT
CACTGGATTAGTGTAGCTCCAGCAACCAAGAATAAACAGTACATTTACTGACTTTGCAGT
GAAGACATTGCATCATGAAACATTTGATTTTAGGCTCTTACCTTGACTGGAAAAGTTCCT
GGGGGCAGTTTTGTGGTGAGTAGATCCCTTAAACGACGGATTGCCTTCACCTTGTTTGCA
AGAATATCAAGCAGTGGCAAGAGCTCCTCAGTCCTCAGAGGGAAATTAGGGGACAACCAA
AGAACAGGCCTTAGACCTTTCTTATACTCACTTTCTTTGGTACTTTCTTTGCGCCTATGT
CCATTCTCAGAAGTTGCAAGTTTACGACAATCCTTTTCCTTGCCATTTCTGTTCTCATCC
CTTCTCAATATATCCACTGAATGTCTTCCTGGTTTAGTTTGTACATTCGATGGAGATCCA
ACGCAGAGGTCGCTCACCTTCTCATCTACACAGACCGAACTTCTTGGAGGTGCCATCTTC
TTTGTCATCTCTAGCTTACTACTGCCAGTTTGACCCCTCTTTCCCCAATTACTAAACCAA
CCTTTCTTATCATGTTTACTCTCCCCATTTCCAGAGATGCTCAAATCCTCAATTGGTATT
TCCCTCTCCCTTGGCTCAAAGCAACTATGTCTAGGACCTACAAAGGTGTTGAACTGGCTT
TCACCACCAGCATCTGGAGAATCCATCTTAAGCGCAGATTCCAGCTGCCTCTTCTCCTCG
TCAGTCAGTACATCATCGAACCCCTCACTCTCAGTATCATTCTCATTGCAAGCTGAAAAG
AATTCCTCATCCGTCATCGCACCAGGAACCCTCCTTGACTTAACACTCACCATAACATGG
TGCATGTCATACACCTTAGCCTTCCACAAGCCAACAGCCTCTGTCCTCTCCTGCCGCCGC
CATGTGACCTGTGGAAGCAGTACTGCTTGAGTGACGTCTATCCCCGGACGGAAGATATTC
GTCTGTGACATTGCCGTGACCTCCTGCTGGACCTCTACCTCGGAGGCCGACGCACCAGCA
CCTTCAAGCGCGTTCATCACCTCCTTATCCTTGTGGTTAATCATGCACAATGACCCTGGT
GGCACCTTGCCGTCCTCCGAGCCCTCCCCAAGAAACAGAATAGTCTGGTCAGAGCGCTGG
ATCTTGAAGCCATCAAAGCCCGCAAGCGTCATGTCTGCACGAAGGTTGGCCCCGCGCTTC
CAGACCCTGTAGGTATCCGAGGGCGCGATGCGGGAGATGAAGGGAATGACGGAGCTCTCG
AAGTGGAATGTGATTTCCATGTAGAAGTCGCGCATCCGGCGCATGGCGGCGACAACGCGG
GGCAGGCGGCGGCACCATTTGGCCCAGGCGAGAGGCTGGTAATGGCGGACGATGACGCGT
GCGAGCGCCTCCTCACGCGCGCAGATAGCCTCCTGGAGCGCGCTCCAGCCATGCTCGTTC
TGCAGGCTCCAGTCGGCCCCCGCCGCCATGAGCATCTCAGCTGCCGTGGCGTCGCCGAAG
CGGACGGCGAGGTGGAGCGGGGTCTCGCGCCCAGGGACGTCACGCCGGTCGACGATGGCC
GAGACGGCCTCCGCTCGCGCCTCCTCGGCGATGGAGTCCGCCTCCGTCCGGATCTCCTCG
GGCTTCCGAGCCTGCGGGAGCGCATCCAGCACGCGGCGCAGGGCAGCGTGGTCCTGCATC
GCCACGGCGTGGTGCGCTGGGCTCTGCGCGTACCTCGCCGCGTCAACGCCAGCCATCGCG
CCGCGACCACCGACGCAACTCCTGCGAATCCGGGGACCGGGCCTCGCCTCTCTGTAGCCC
TATCGCCCTGATCTGTAACGCCAGGCAAAGAATTAAGTGCAACGGAAGGGGCGAAAAGCA
AGCAAGAATCGATGGAAGGATCCCTTGCTTGAGCACCAGTTGCCCTCCAATCCCAATCTT
GGGGTTCTCTTCTCCTTGCCTATCTATCGGGCTCTCTCTGCTCTCTTGTTTTTACTCCTC
CTCGTGTCTCCTCTCGGCTAGACTCGGCCTAGGAACGAGGGAAAGTATTGACATCTAGAG
AAAGGGGGTTGGGGGTGGGGCAGAGGTGTGAGATTGAAAGGTCAGGACGAGGGAGGGGGC
GAGAGCGACGAACATTGGGAAACTCTCCCTCGCTATCGTACATTTGATCGTAGCAATTCG
TCAGACCGGCCGCTTGCCGTCCGTTTATAGCCGATATCTTTTTTTTTGGAAAATTTATAG
CCGATATCTATACTCTATTCTATATCTACTAGCAAAAAAGTCCGTCGTTGTAACAGAAGA
AAAAGAAAATACGTTCTTAACCCAATAACCATGATTCAAGACCATGTCCACTAATTTAGG
TTGTATAAATTTGTATGTGAACGCTTGTGTATAAATGAAATATATTTGTGGGACATTTCA
GTCTGAATATCCCACGAGCAGCCAGCATAATTACATACGAAGAAATAACAGAGGTAGGAG
CTAGCGTGAACCAAGTGCTCAGAGTAGTGTTGTGCCCCGACCTCCTTCCTCGTGCTCTCC
GCTTATCTCTCCAAAGCTTGCTCTTTTTCTCTTCCTGTGTTGGCCCCTCGTCTGTCCCTC
TTCATCCTCCTTCCTAGTTTGCACGAGGTGCTCCCTGTGTTTCATCCGCCTCGCGCCCAA
AGCAGAGGAGGGGAGCTCCCTGCCCCGACGACAACAGTTGCCTCGGCCTCCTCGCCACCA
CCACTGCCGTGTTCCCCTTGCCAGAGCAGGTAGTCATGCAGCCCCCCGGCCTAAAGTATG
CACTGGATACCGACATGATTCGCCTCGCATCGACCTCCGTTGCTTCCCCGTTGTTCCCCG
CCTCTCGCGGCCCTGCAGTCATCGCCCTTCTCCTAATCAAGCGCCGCTCGATCCGTAGGC
CCGGAGCGCGGTGGCCCGGGCCTCGTCATTGACGAACCGCACACGAAGAACTCAGACGCC
GCGGGGAAAAAGGCGCGGCGAAGAGGAGGCAGGTCGGGGTGCATGGAGGACGGCGTGCCA
GAGGATGCGGGCCGACGGCGGGGAGGTGGCAGATCCAAATGGGGGTGGGAGGCGCGGTCG
CTCGACTCCGACGTGAGGAGAACAGGGGATGGGCGGCCGCTCCCGCGCAAGCGAGCGACA
GAGTGGTAGGCCCGGAGTGGCAGCTTTCCAGGGGCTTTTTTACAAAAAAAACAAAACGTT
TTCTTTCACTTACTATAGGACTGCGGATCGGTCTTAATAAAATACATGGGTTTTTGTGTA
AAGCTAAGACGAGGGACGACAGAAGCCATCGGTGCTTTATTATTAGGGAGAGATATCTAC
TGCAATCCAACTTCACCA