Contig Data
morexGenes
Links



Map Locations of contig_57489 (6101 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57489

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70131 1 1016 bp MLOC_70131.1 Available Available LOC_Os10g29320.1, FRAME:-2, EVALUE:9e-96, 13110.m02507 protein speckle-type POZ protein, putative, expressed
MLOC_70130 3 1749 bp AK358031 Available Available None





CDS Structure of MLOC_70131






CDS Structure of MLOC_70130






Contig Sequence (6101 bp)

>contig_57489 6101 assembly3_WGSMorex_rbca.fasta
CCCCAGTCCAGCGCCGCCAGGGCAAGCGCCGGCGCGGGCGCGGCCGAAGAGGCGGCGGTG
GTGGTGGACGCGCGGGCCGCCGTGGCGGAGACGGACTCGGCGTTCGTGTGCGCGACATTG
GACTGGTGGCCGCCGGAGAAGTGCGACTACGGCACCTGCGCCTGGGGCCGCGCCGGCCTC
CTCAACCTGGTAACCTCGCCACCTCTCTGCCTCCGTCCTCTGTTTCAGTAACAACAGTTT
GTTCCTTGAGACGTTTTGAAAATCTCTGCAAAAAATTCGAAATCTTGCTGTTTGAACTTT
GAAACTCTGCACAGCATGGATTTCTTTACAACGCGGGCATCGTTTCCGAGGACGTATGTT
GGGTTGTTTTTCGTGTGTCGGCAGCGCCATGGGTCTTCTGGGAGTGGATAGGAATTTTGA
CGGCCTAGGGAGATTACACGGACCTATAATCAATTCTGTCGGACAATTTCCAATTCTGTC
CCTGCCAATCATGTGCTGATGCAAAAGCCTACTGCCCACCAACCTTCTTAACAAGAGAAC
TATTAGCACTCCAAACATATTAGATTTCAATCAGAAGAATGACAAAATTTCAGAACTCAT
ACCAGTTCTAGTAATTCAATTAGTTTTTTAGGTAACTAATTCAATCACTTTTGACGCCGT
CGCAAATTTTCCCGTTTCGGCGGGAAATGAAGCCTTCTGCATTAGTAGAAAGAAAAAAGA
CCCGAATATGATAACAAGCATGTGAAATATATGTGGAGCACGAGCAGTGTTTTGTTTAGG
TATTTTGGTTGATTGTTTTTAGTGTGTCGGCAACGGTACGGCTGTTTTGTTAGAGAGAGC
GGGTAAGAGATTACATGGATTGTAACTCTAGCGGACCATTTCCGTTTTTGTCCCTCCAAT
CATGTGCTGATGCAAAAGCCTAGTGCCTACTGGCCACTCCAAAACTGCTCCTACTAACCC
TCTGATGTCCTCCTTAAAAAAAATGGTTACATTCCAATCAATAGAACAACCCACAATTTT
ATATTTTCATTTGAAGAGAAACAACAACTAAAAATCTAGTACTCACTTATTTTGGGACGG
AGGGAGTATAATCTAAGAGTATACCCGTAGCGACTTAATTATGTTATTTTTGCGCGCGCC
ACTGTTTTTCCCGGGTTAATTTGTGTGAAATCCCCTTCAAATTTGTCATGAAATTCCTGC
ATTTCCCAAACATGACTATAGATTTGACCCCAGCCATGATTGTCTCCCTCCCTGCAGGAC
CTGTCCAGCAAGATCCTGCAGAACGCCGTGAAAGGTAAGGCACGCTCATCACCTTTCGCT
TTCATGAATGCTGCCATGCTGGTGCCGATCATGGCATCTCTCCATTGAGTGAGCTCCACG
GTACCGATCCCGGTGGTCTTCCTTTTGTTTCTTCGCAGCCTTCTCCCCTCTCCGGCTCCG
GCTCGGCGGCTCCCTGCAGGACCTGGTGGTCTATGGCACCGGAGACACCGGGGCGCCCTG
CTCTCCCTTCACCAAGAACACGTCGGCCATGTTCGGGTTCACGCAGGGCTGCCTGCCGAT
GCACCGGTGGGACGAGCTCAACGCCTTCTTCCAGGAATCCGGGTAAATTTTCACCGTAAT
CAGTAACCTCACGTCTGTATCTGTACAGAAGTAAAAGTTAACACATATACGTAAATCAAA
AATGAAGATGATAATCTGACTTTGTTGGCTTATTGCACTTTTGATGATGATTGCAGTGCA
CAGATTGTCTTTGGGCTGAATGCGCTGAATGGCCGGGTCCCAATGCCTGATGGCTCCATG
GGAGGACCATGGGATTACACCAATGCTGCTTCTTTCATCCAATACACTGTCAGCAAGGGA
TATGATATCTATGGCTGGGAGCTTGGTATGTATGCTGATCAACAGTGATCTTCCTTTTCT
TTTGCTATAATATTGTTTTGAAGTTACTTTACGGATCAAGAGAGATCCTGATAGGTTTGA
ACAAAAGAAATCCCAGACAAGTATGTCGGCGTCGATTAGGTGATGCTGAGCCATCATCAC
TTGTAAAGAGCAAGGGGGAATATCATTAAATGATGCTCTCCTTTGCTTTTTCACGCGTTA
CTCAATGTACAAAAAGGGACACTTGTAGGAAATACCCTGAACTTGTCTTTCCAAAATGCT
GCTTAAAATACAAACTTTGTAAGCAGTAGTTTTTGTACAGGTGTTTAGGAATTTACCGTG
CTTCCATTGCAGGAAACGAACTCAGTGGCAGTGGAGTTGGTACTCGGGTCGGTGCAGATC
AGTATGCCGCGGATGTGATCAACCTGAACCAAGTCGTTGACAAAGCCTACCAAGGATCGA
AACCGCTGGTGATCGCGCCGGGAGGCTTCTTCGATGCGGGTTGGTTCACCGAGCTCGTAG
CCAAAACAAAGCCGAACCAGATGGATGTGATCACTCACCATATCTACAATTTAGGCCCCG
GTATGCTCGCCATGACTCACCGTCGATTCGGCACATGAACTGGAAACATGGAACCTGCAT
AAATGGATATAATTTTTTGGGTGTATCAGGTGTTGACACGCATCTGGTTGAGAAAATTCT
CAACCCGTCTTACCTTGATAATATGGTAAGCACGTTCAGCAACCTTCAGGGGATACTGAA
GTCCGCAGGGACAGCCACCACCGCGTGGGTCGGCGAAGCTGGAGGGGCTTACAACAGTGG
CCACCACCTTGTAACTGATGCATTTGTGTTCAGTTTCTGGTAAGACAAGAAAAATAATCA
GCAGTTGAAGTTACTATCTGAATTCTGAAGTGTAGTATTTATCAACCACGACATGTTGAT
GTTTCAGGTACCTGGATCAACTCGGGATGTCCGCAAAGTACGACACAAAGAGTTACTGCA
GGCAAACCTTGGTTGGAGGGAACTATGGCCTGCTCAACACAACAACGTTTGAACCAAATC
CTGATTACTACAGGTAAGCTGGCATGCCTGAATATCTTGAAAAGTTCCGTCACAGGAGAA
ACTATAATGTTTTTATTCCAAGGCATTGAACACCATAAATCATGATTACATACCATCCAG
CGCATGTCTAAAATCATTCCACTTATTAGAATGTGGCACCACATACTTAGTTTCCAAGCT
AAGGATTGGTTCCATACATCCTGTGCACTGAAACATGATGCCAAACTTGCCATCTTCATG
CAACTTATTCCTGCCTTCTTCTGCAGTGCTCTGCTGTGGCATCGCCTCATGGGAACCAAG
GTTCTCTCCACGACATTCAACGGCACAAACAAGATCCGTGCTTATACACACTGCACAAAA
GATTCGGTAACGAGCACGGCCGATCCATGTCCCCCTTCCATCTTGACACCGCAACTGTAT
TAACTAACTGGCCTGTACTTAATTTTCTCCCTCTCAATTTTCCAGGAAGGGATCACCCTA
CTCCTGATCAACCTCAGTGGCAACAACACAAACCACATCTATGTGACCAGCGAGGGCGCA
CAAGAGGGCGCGCATCCCCACGGCGCAAAGGAGCACACAAGGTCCATTCCGAAGCTCGGC
GAAACAGCTGGACTCACAAGGCAGGAGTACCACCTCACCGCCAAAGATGGGAACCTGCAG
AGCCAACACATGCTGCTCAATGGCAATGTGCTAGCCACTGGTGCCAATGGAGCCATCCCC
AAGCTGGAGCCGGTGCAGGTTGACGGAACACAGCCCATAACCCTGGGCCCTTACTCCATT
GTGTTTGCTCATATTCCAGACTTTAATGCTCCTGCCTGTAGGTAGATTGTTGATTGGTTT
TTGTGGGAAATTATCCCGTTATCGTAGGTTAGAGTAAGTGCCGGTGGGTGAGAAGCAAAG
CATGCTCACCTGCAAATGAAGTAAGCTGTAAGGCTGAAATATTTGTGATTTATCATTGTT
TTCATGAAATGAAATGTCAAGAAAGCTTGCGTGTGCACATGAAAGGGAATGAAAGGGGAA
AATAATTTATAACTTCTGCTCATTCCACTGTCAATCTGTTTTTGTTGACACCGAACACAT
GCTCCTTTTAGTTACTAAAATGCAGCATTTAAGCGCTTCCAGTATATGATAGGAAAAATT
ATAACTATGTAGTAGTAGCCAGATTCTCTCATGCATTTTCTGTTATGTAAAACCGAGTGC
AAATCAGGTTAAACCATTGCTATTGACAAAAATTAACCAGCTTCGCTGCTCCCTGAAGAT
CGGCTTGCAGTTTCACAGGCAGCCCTGGACCGCGTGCAGAACATGAAAAGCAAATGTTGG
ATGTTTTGGTTTTCTAAACTGATATAGAATCTCAAAATCCACATATAAATTCCTTGTATT
ACAGTCGCCTTAACCAACATAGAACCTCTACTGCCAAACAGAAGAAAAATGTTGTTCCTA
GAAGTACTTCACAGTTCACACATATTACTACTGAGAATGAGAGTCCTAGAAGCAAACTGA
TTTTTCAAGATTCCCCTGTTCTAGATCACCACATCCTCAAATGTATGGGTACTGATTGTT
ATAAGTTATATCATATCCCACAGTATTCATTGGTTTCAAGATATTTTATTTTTCTTCTTT
TCCAACTAGTGTAAACCCTGAGATTTCATACACAAGGAGAAGGCAAAGGGGAGAAAATAC
AGGATTATTGTAGATGCAATGATCAAGCTATCTGAAACTGAAAACAGAGTACTTGTTGAT
TAACATGCAGAGTAGATAAGAGACTATTTTGAAATATTGAAAAACAAAAAGCATTCTACA
TGTGCATGGGAAATAATAAAACCAGATAACTAACAGTTCCAAGTGGAGGTTCAATCAGCA
CAGCTACCTGAAAAATAGTCATCCATGATAAATTGTCGAGGGCGCCTATGGTTGAAACAG
CGTCATACTACTCTGCATTTCCTTAGAAAGTTAGGGTAGATGAAATCTTGTACTACAATA
ACTAAGTGATAATAATAAGACAAGCCAATAAGGTTCAGTCGTTCAGAAACAAAATGGAGC
ACCCAATGCTAAAGCAAGCGCAATATCCATTTGCCAAGAAACCAGAACATTCTATGCCCT
CTGATCACAATGCACTTCCTGGTTATTTGGCACAGTTGCAGAGCTGCAGCAAACTGACAG
AAAGGGGGCAAAATGGGGCATTTTTTCCGCTTCTCGATCATCAATTAGAGTCTAACAAGT
CAGCCAACTGATTACATACACATTTCCCTTACATTAGTCTCTAAACAACAATTTATTCAC
CAATGGCAGAACGCTTATGGGCATCCACCATGATCCATCACTCAGCTAATGCCCAAGGAC
ATGGTGATCACCTCGGCCATGAGAGAAGGGCAGCTCCTGCTCAGATGCTGGAAGCCTTCG
GTGGCCACGACGGCCCTCAGGTTCGCCGGAGCGGCGAGGAAATCGAAGCACGCCTTCTTC
AGCCCCTGGCAATGGTGCTGCTCGGCCAGCGCCAAGACGATCGCCGCCGAGCCCACGTTT
ATGCACTCGCAGAGCTTCTCCTCGCAGATCAGCTTCAGCCGCCTCATGCCGTACCTGTCT
GCGGCGACGAGCAGATGCTGGCAGGTGACGTCCTCGTCCTCCTTGCGCGTCTCCGGCAGC
TGGCCGGTGTACGCGAAGCGGAGCAGCGCCCTGAACACCTCCGCCTCCATGTCTTCCACG
CGCACGACGATGCCGGCGGCGGTGCTGCAACCCTCCTTCATCGGCCCGAAGAGCTCGGCG
GCGAAGACAGACGAGCGGGCCGCGAGCACGCACCGGTGGGCGGCGATGGTCTCGCCGCCG
ACGTCGAACACCACGTCGGCGCCTTTCTCGGTTTCGAGGAGCCCGGCGAGGTCCCGGCGC
AGGTCGCACGGCGGCACGGAGACGAATCCCACCGCCGCGTCCTCGGCGCGGTAGTCGCGG
ACGACGACGATGTCGCACCGGACGGTGAAGGAGTCGTTCCTGAGATGCTCGGAGCCCTCC
AGCTCCTCCCTGGCGACGAACGTCGTATACACGCAGCCCCTCCCGGGGGTGAACTCGTCC
ACCGAAGCCGCCGCCAGCGCGTCCTCCGCCGCCGCCCCCCCGGCGGGGCGGGGGGCGGAA
TGCGCCTTCAACGCGGGCGCCCCCGCCCGGGCGCCCCCGTC