Contig Data
morexGenes
Links



Map Locations of contig_57478 (3496 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_57478

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70120 2 1373 bp MLOC_70120.1 Available Available LOC_Os02g48010.1, FRAME:+1, EVALUE:4e-173, 13102.m05420 protein nuclear matrix constituent protein 1-like, putative, expressed





CDS Structure of MLOC_70120






Contig Sequence (3496 bp)

>contig_57478 3496 assembly3_WGSMorex_rbca.fasta
CGCGCCCGGCCCCCCCCGGCCCCCCCGCGCCCCCGGGACGCCGCCCCCCGCCCCCCCGCG
CCGTGGCCGCCGGGCACCTCCCGGTGAGCGCTCTCCTCGCAGATCCGTTGGTTTTTTTTT
TCCGCGGCGCGCTTCTTCGGGCGGCTTCTCGGGATTTCGAGGGTTTGAAATTCCGGAGTT
TTCGGCGGGGGACGCCTCTGGGCGGCTTGCTAATGCGGGGCCTCCTCGCGGCTCCGGGGG
CGGATTCCTCCGCGTTTCTTGGCAATTAGGGTTTCCTTCGCCGGGTTTTCTTGGTGGTTA
GGGTTTTGCCGGAGGGAGCTTTGGTTGGTAACCTTTGTGCCTTTCTTGGCCTCCGGGACT
GCAGGTAGGGGGCGGCGCCTCGTCTCTTTGATGCGCCGTGAAGGAATTGGGAGCAAGAAG
CCGTGATGTTTACTCCGCAGGGGAAAGGATGGAACGGCTGGTCCACGCCGTCTCCAGGAA
ACCAGCGGGCCGGTGGTGGCGCTCCGCCCGCATCTGCGCCCCTTGGCAAGGCCAAAGGGA
CTTCACAGAGAGCTGCCGAGCTCGAGCAGGAGGTTTTTCCCAATCTTTGCCCTTTTTTTT
TCCCCAGTCCATGCAACTTTTGAATCTAATTTCGGGCCATGTCTCTTTACTCGCTTCGAC
TTTTGTCCCGAATTATTTAAATTATAAGATTCACAAGTAAGGCCAACTCTGCAGTACTAT
TGTCCTATATAGGAGTATTATCTATCTTTATCACATGTCGTCAGTTATTGAAAAGTGAAA
ATAACACCATTATTTAGTCAGTCATGCCTCAAACTTTTCAATTTAAAGGCCTTTCAGAAG
ATAGGGTTCTGACAGTTTTTGTTAGCACGACGAAACTCTACTCTTTGCTTGTTCTTAAAG
AATCATATTTTCATGTGTCCCACGGCAATCCATTTTTTCTGGCCGTTTTGTCCAGACAGC
CTGAAACAAAGCAGTGCAGAGTAGTAGATTGGTTCTGCTTATACCATTTAACACTTTTCT
CAGTAATGTTAGTTTTCTGCCTGTAAGAAGTAATAATAATGGACAGGTAAAAAGTTATGC
ACTGGTGAAAGTTTTTATGTGTATTTTTTCATTTTCCTTCTCAAGCACTTCGTGTAATTT
GAATTTTGCTTCAGAAAATTTCTTCTTCCTCATCACAGTACTTTCTCTGTGGGGATATTT
AACCTTCCGTTTTGTACCTTGTCATAACAGTTCAGTTATTGACATATGTGTTCTCATGTT
ATGGCTTGCAGTTACATGAATATCAGTACAATATGGGTCTGCTCTTGATTGAGAAAAAAG
AGTGGGCAGCTAAATTTGACGAAGTCACCCAAGTGCTGACACAAAAAGAGGAGATCTTAA
AGCGGGAACAAGCTGCACATTTGAATGCTATTTCAGAATATGAAAGGCGAGAAGAAAACA
TGAGGAAATCACTGGGTGTTGAGAAACAATGTGTAGCTGATGTATGTCGGTCTCCATCCC
ATTGTTTCTTGTTCTTGTCGTTTATCAGCACCATTCTGGCCTGTTTACTCTGCCAGTAGC
AGAGAACTAATGAGCATACATATGTTCGAACCATATTTTACATAGATATTGGTTCTTGGA
AGTTGTTCAATACTTACAATTGTGTGTTTTATGTGATGTTACTTTTTTAGTATAACTTAT
AATAGCTAAAATGAGTTTGTAGGAATTTTAGACTGCACCCATCATAGTCATCAGTATTGT
TTTTACTGAAAGCACTACTCTCTGTTCTAAACTGATTATGCGCTCCAAATTTTCTTCTGG
TTTACCTTATGACTTTTATGTTTGTCTGAATATGCAGCTTGAAAAGGCACTACGTGAAAT
TCGATCAGAGATAGCTGAGGTTAAGTTCACGTCTCAGAAAAAGGTAGCTGATGCTCAATC
TCTCGAGGCTAATTTGGAGGAAAAATCTTTGGAGATCGAGGGGAAGCTTCATGCCGCAGA
TGCGAAGCTTGCGGAGGCAAACCGTAAGAAGTCACAAGCTGACAGAGATTTAGAGGAGGC
AGAAGCTCGGCAACGTAGGTTGGAGAAGGAGAAGCTATATTTTGAGACCGAGTATGCCAA
TTTTCTCTGTCTTCTTTGACCACTTTATACTGTGCTATGCAGGTGATAATATTGTGTATT
ATGTTTCGTTGTTTTGGTCACGTCCAGGAGGAAGGCCCGAGAGAAGCAACTCAAGGAGCA
GGAGGAATCTCTGCAGGACTGGGAGAAGAAGCTTAAAGAAAGTCAGAACAGACTCGTTGA
TTTGCAGAGATCTGTAAATGACAGAGAGGAGAGAGCAAATGAGAATGACAAACTTTGTAA
GATAAAACAGGAAGAATTGGAGGAGGCAAAAAAGACAGTGGAGTCAACTAAAATCATTTT
GAAAACAAAGGAGGAGGATATTGCCAAAAGGCTGAATGAATTACGCTCACAAGAAAAGGT
AACCCAGTGATGGGCCCTTCCTTCTTTTTTCCTCATTCTGGGTTATGACGAATTGATAGT
AAAATAAAAAATATATGTTGTTTATTTCCTATTCATTTGCAGGATGCTGACTCAAAGCAC
AAGACTTTGGAAAAAAGGGAGAAAAAGTTATCTGAGAGGGAAGAAAAAGCTAGTACAAGA
GAAAAAGTAAGCAATACACAATTATGTATAAATGGTACATGCGATGTGGCTGTTACATTT
ATTTGATCATTATGCAGTTCATGCATTTTACCCCTGGGGAAAACTGATGGCATATTAAAT
ATGTAAATATGTACTGTTGATATTTTATGTTCTCCTCTAGTTTTTTCTGTAGCCTTTTCC
TCTGTCCCTCTCCCTCTCTCTCTCTCTATACATATATTATATATTATACTCCCTCCGTCT
CAAAATTCTTGTCTTAGATTTGTTTAGATGTGAATGTATCTAGTCAAGTTTTAGTATTTA
GATACATCCATTTCTAGACAGAGCTAAGACAAGAATTTTGGGACGGAGGGAGTATTATGT
TATGTTATGCTGTAACTTTCTACAGGTTGGTATGCTTAGCTTATTATTTTACCGATTGTG
CTATTCCTTATGCTTGTCAGCTACAAATGTTCATGTTCCAAGCATCATCTTTGGAATATT
TTATACACAGCATATTATGTGTAACATGCACCTTTTTCAGTGAACTGATATTGTCAGAGA
ATCTGTTTCAGATGGGGCTTCAGAAGCTTATCAAGGATCACGAGGTGAAGCTTGAAGCAA
AAAGACGAGATTTTGAATTAGAGCTGGAGAGTGAGAGGAAATCCTTTGAGGAAAAGCTGA
AACATAGGGAAGCTGATTTGGTAAAGAAGGAAAAAGATCTCAGTTCTCGTGAGAACATAA
TATCTAAAAGGGAGCAAGCATTAAATGAAAGCATGAAAAGGCTGGAAGATTTGCAGATTG
ACCATGATACTAAGTCGAAAGCTCTGAAGAAGTGGGAGGAGTCACTGAAGACTGAGAAGG
ATAGCTTATCCGAAGA