Contig Data
morexGenes
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Map Locations of contig_57441 (6641 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_57441

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70103 1 1355 bp AK358360 Available Available None
MLOC_70104 2 3295 bp MLOC_70104.1 Available Available LOC_Os06g44620.1, FRAME:-2, EVALUE:0.0, 13106.m04689 protein AMP-binding domain containing protein, expressed





CDS Structure of MLOC_70103






CDS Structure of MLOC_70104






Contig Sequence (6641 bp)

>contig_57441 6641 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCTTCATTTTTGTAAGACGTTTTAGACAAATTTCAGCTATCTAAAA
CGTCTTACAAAAGTGAACAGAGAGAGTAGTACTATTCATATATAGACTTGTCTTTTCCGC
GACAAAAACCTAGAATTGCCTTTTTTTTATTCTATTAATTTGATATTTTTTTTAATTTTA
TGGAGTTGTAGAAAAATCTCTTATTGACTCGCTCGATCGTTTCCAAAGATTCTCACTTTC
ATAACTTTTTAGGATGTTATGTGTATGGCTAGATTGCTTTCGGGGCTTTTTTTCTAAGAA
ACTGTGGCAGCTGTAGAAATCTCTTATTACACTCGATGGGACCCAAATGATAAATGAGGC
AGAGTGCGTGCACTCATATGGGTGGGTGCGCTAGTAGCTCACAAATTTAAGAGAGGTTTG
CTCATTTGGTTTCTGAGATATGGCATGCCACATTGACCATTTTTGGTACAAATTTAACAG
TCAGCTGTGATGGTTCCAGGATATATTTTTTCGGTGATTTAACTGCTTAATTAACTTGCT
ACTGCCTTTCAGAAGGGAAAGAAAAAACACCTTACTACCGCTGAGTTAACAGTGTCAATG
ACCTAACAGTGTCAAAATATAATGGCATTTATCAATATGAAAAACACGAAGGATTAACTG
TATGCGCGTGCCTGACGATCGTGCGCGGTGCAGGGTTGCGCGTACCTGACGTTCGCGGCG
ACGGTGGCGGCGGCGCAGGCGTGCCTGATCGCGCTGGACGGCGCGCAGGCGCTGCAGTGG
AACAAGCTCTGCAACATCTTCACCCGCTTCTGCCAGCAGGTCGCCGGGAGCCTCGTCTGC
GGCGGGCTCGCCGCCGTCGGCACCGCCGTCCTCTCTGCGCTCTCCGCCCGCAACCTCTTC
CGCCTCTACCCCTCCCTCTGCTCCCACCCTCACCGCTCCTCCTCCACCACAAAGTAGCCG
GCCCGGCCCGGCCCGGCCCATGAACCTCACCCAGTACCAGGGTGGTGGTGGGCTCCCGAT
GATCGATCACCAGCAGCTAGCCGCCTTTAGGAGACGCTCGGCCCGACTACGCCCAAGTGG
ACTCCTTGGGCTTTTCTTCCATTTCGTTGTGTCACTACTAGTGTGAGAAGGCATTAGACA
TGACTGTCTGTATGTGTGCTGCAGTAGTGTGTTCCTCCAGAAAAATATGTATCAGTGTGC
TTGTGTAGTTGTATCTTATATGTATGTACTCTCTGTGTAATGTTCATGGACCATGCACCC
TCTTCTTTGCTGGTGCTACGAGCGGCGATATGAGCAAAGTGTCTTCAAAGACCGAAATAT
ATTGGTTTTCCTGAGAGAACATCATGTTCTAACCCTGCAAGAGAAATACGGACCCCGGAA
GTAAAGCCCTTCCACAATTCCATAAGACAGGGAGGAAAAATAACAAAGAACAATGAGCAC
ACGAATCACCGAAACAGCCAATCCACTGGAACAAATGAGTTTAATTCAACTTGCGGTATA
AATCACAAGCCGTATACATTATAATCAGCCTTTGTTGTCAAAAAGAGTCGGTATCTATAC
ATGACATGTTACACACCACCGGACGAACAAACAAACAAATTATGTGACTTAGCCAATTAA
AAGAATTGAACATGTGCCAGGCCTTCTATATGTAATAATATTGTTGCCATTTCATTGAGA
ACATTACATGATTTTGGACAGAGTTGTGTGTGTAAGATGGGACTCAGCTCTTAGACGCTG
TGCTTCCACTGCCTGGGATGCCTGCGGCGAGCTTTGCTCTCAGGTCCTTCCTGAGGATCT
TGCCGGCAGGACTCTTCGGAACCGAGTCCGCAAAGAAAACTTTGTGGATCCTTTTGTAGA
AAACAACCTGTAAGAATATGGTAAAATTTGTTAGGTTTGAACTCTCTGAGATCTGCACCG
AATTGCTGAACATACATGAACCAATGCAAACATTTGATGCTCTCTTCAGTCCTATAAAAT
AACATGCTGGATGGCCGTTATGCCTCACAGTTCACAAATTACATGTTGTAAATTATGCTC
TCTTCAGAATTTTGTAAAATGTACTGTTTGTGGCAACTTTGTCTGTTTCTCTATTTGTGC
GTCATACTTGAATATATGGAAAGTGGACGACTTGTTCTTACCTCTTTTGCAACAAACTGC
TTGATCTCGCTCTCGCTGATCTCAGAGCCTTCAATCCGCACAATGAATGCAACTGGTACT
TCACCAGTAAGTTCATCTTGCATCCTGCAAAAATTGAAGACCAGCTAAATTTAATCACCT
ACTTTTGACATGAACCAAATGGATCCTGAATCCCTTTGGACAGTTGATCGACTTACGATA
CAACAGCAGCATCTTTGATTTCAGCGTGTGTAATGAGAAGGGCTTCGAGTTCCGCAGGAG
GTACTTGGAATCCCTTGTATTTGATTATCTCTTTGAGCCTGTCGACGATGAAGATCTCGT
CATCATCATCGACATAACCGATGTCTCCAGTGTGCAACCAACCATCCTTGTCAATGGTGT
TCTTTGTGGCCTCCGGATCATTTAGGTAACCTGCAAATCATAGGCTTGGTCATTAACATG
AGTTGTTATCTTTGGGTATCATGATACATACTAAAAAAAATTGGTGCCTCACTAAAAAAA
ATCATATCAATGGCTAAGCATGTGCGGCAGGTGCAGTTAGTTGGAGAAATTACAGAAATA
GTCCAACTGATTATCAAGAATTTTCAGTAAAAACGCTACTGAATGGAGTAAATCTCAACT
TCAGGTCTGAAACTTGGTAGACATGCTAGTACCTAGTAATAGTTCTTATCCATTTAAGTT
GCAATCTAGAGTATGCAGTACACGTATTATTTGAGGGTAAATATATCGTTGTGAAAAATG
AAACATAGAATAATTCTTGAACGTCATAGTGAACACGCATCCAGCTGTCTGCGAAAGCGA
CATACTGATCATGTCCAAATTCTAGATGTATTCAGATAGTTTTCAAGTAGAAGGAAAATT
CAACACTCAAATAGAAGGGTTACATCAATATGGAAGGGAGCATGATGCAAAAAAATAGTT
TTATTCACATACAGTATATTAGTAAAGTGAGGAAATGCTTCTTCTGCCCTTATTAGTTTC
AGAACATGAAAGGGCATACATAGGAAATGGACAAATTCAGGAATCATCAACATTCCCATC
CAGTTGCCATCATGTGCAAGCTGTATTACGCGATCATGCATGGGTGACCGCAGAACAGCC
TGTTGGCACGATGTATCCAATCATACATGGTACAACTTATTCATACGCCAAGTCAGAAGG
AGCTAAACGTCTCCACGTCAGCGCACGTGGTGCATGATGTGCTAGGTCAAACAACTTAAT
ACTTGTAACTATTAAAAACGAGGAGAAAGGCAGGCTTTGTTATTTTTTATGTTAATGATA
GACCTAAGCTTGGCCATTTCCTCCCCATAAGATGAGCATATACTTTTAAGTAAAGATAAC
TAGTCATGCATATGGGAGTTTGTCATGTGAATTCTTCACGGCCAGCATGTATGGGACCAT
CTAGAAGATGATGCCAAGTTTGATTCTGTTGTTGCAGTACACAGGCTGGCTAGCACTGCT
GGAACCCCATGTAACATGTAGCACGGAATTGGTTTGTGACTAGTACAACTTAATTCGGAA
CCTTCGACGTTTTGAGTGGCGATCGTCTCGTGCGGCCATCTAGCTTGCTAAAACCAAAAT
GCTGGTCCGCTGAACGGTTCAGTCAGATTGTCGGCACCTCAGAAATATCCCCTCTCATCT
AAAAACACAAGAACTTATCCGTAATCAAAACCATTGGTGTCTCAGAAGGGAGTCGTCTCC
TACTACTACCGTGTGGTGGTTGCTTGTTAGGTTGGATGGAGCTGGCTCACCGGTCACCAG
CTACAGCTAGTAGCACCTAACTGGAGACCGACCGACCGACCGGTGAGCCGAGCATCTGGT
CATCAGAAGGTAGAAGAAGCTCTGATCCGTGCAGCCACTGATCACTCAGATTACTCTAGT
CGTCCGTCCGTCCTTTCGCTCGTTGGCTAGTGGCCAAACGTACCAGACGGAAACGCATCA
TGTTCGATAAGTATCCATCTGCCTGAAAGTGCTGTCAGAAATGGGTGGGTGGATGAGGTT
GGCCGATAATTTGAGCTCTGGAGCTGTGAGTCCGAACCGGTCACCAACCTACCAGTACAG
CAGCATCTACCCATGAGCTACCTCGGCTTAGCTAGTCGCAAACCACGCCCTCACCCGGTA
CCAATTAACTAGTCATGGGACAGTGGATCACGTCGTCGTTCTTCGTCGTGCCGTCGACGT
CGTTTGGTGCTTCCGAGCGGCGACTAAACTAAACATGGCGGTACTGTGCCCGTGCTGTGC
TGTTTTTGGTTGGACATGGCATTTCGTTCGAGAAATACCACTGTAGCTTTGACGAGTGTG
CGGTGCGTACGTACGTACCTTTCATGATCTGCTTGCCGCGGATGCAGATCTCCCCGGGCA
GGTTGCGGGCGAGGGAGGCGCCGGTGTCGGGGTCGACGATCTTGAGCTCCGCGTTCCGCA
CCACCGTGCCGCAGGACCCCGACTTGACGGCGAACGGCTCCTTGGCGAACGCCAGGCACA
TGGACAGCACCGGCCCGGCCTCCGTCATCCCGTACCCCTGCGCGTTGCATTGCAAAATAC
AGAGAGATCATCAGGCCTTGGTCACCACGCTCTTCTAACCACCAATGCTGTAACTTCAAC
CCAAGTGATACATGTTCAGTTTTAAGTAGTAAGAAATGTTCAGACAGCCGAGATGAATCC
ATGGTGAGAGTGACTTGTCGACCCGAAAGTCTGAGAGGATTGGCGGTTGGCGATCGGAAA
AACGCTGGCTGGCTTGCGGGGACGGCAACCCGCCGGCCGGGATCATGGGGGTGGCGTGCG
TCCGATTCAGACTTCAGTTCGGACGAAGCGTAAAGGTTGGGATGTCGCCGTAGCCCGCAC
CGGAAAGCACGACGCCGCCATGCCACCCACCAAAACTGCGACCTTGGCTGGCGCGCCGGG
CCACCGCCGGCCCAATCCGTCCCAATCGCCTCCCTGATGCCCCATCAACCATTGACGATT
CTTTTGAGGTTCACTCGCCCTCCCAAACACTCCATACAGTTATGCATGATGTATACTAGG
CTAGCACAGTGGCATGACAGCCGGTGCCGGATAACTACGCAAGAGCAAGCAGTCATTGGG
CAGAGATTTGAAGCGAGGGCCGACGGCGAACCTGTCCGAGCACGGCGTTGGGGATCTTGG
CCATGAAGGCGTCCTGGAGGTCCTTGCCCATGGGCGCGGCGCCGGACATGACCATGCGGA
TGGAGGCGAGGTCGGCGGCGGTCACCCGGTCGCTCTTGGCGATCTCGACGACGATGGGCG
GCACGAAGGGCGCCACGGTGACCCCGTGCGCGCGCACCAGGCGCACCAGCGCGCCGTGGT
CGAACTTGCGCATGATCACGATCGCGCACCCGGCCCGCAGCCCCGCCAGCAGCACCGAGT
TGAGCGAGTAGATGTGGAACAGCGGCAGCACGCACAGCACCACGTCCTCCTCCCCGAAGT
ACAAGTTCGGGTTCTCCCCGTCCACCTGCACACACACACACACAAATGTATTCAGAAACC
AAATGTTCAACAAATTTGAACCTTTTTTGCGTCCACGAAATTTGAAACTAAAATGTGATC
ATGCGTGGGCGCGAATCTTGGCGCTGATTGGCGGGCCCGACGGGCGTCACGTCGCCCCGT
CCAGTCCGATCCGATCTCCGGGTAATAAATGGGGCGGCGTTATTTTAAGCAGGGGAGTAA
ATTGGTGGCTGTTTCCGGCGCCGACGGAGAAGCGCGTGGTGGGGAAAAGGAACTTCCCGA
GCTGGAAAGCGTAAAGCGATACCACGGGAAACGGAAATGGGAAGCTCGCCTGGCCCCGAA
GGATCCGCGGCTTGGTCAATGGAAGTAACGGAGATGGGAGTGAGGCAGTGAGCTGAGGTG
AACTGACCTGCTGGGCGACGCTGGTGACGAGGCTGCGGTGGGTGAGCATGACGCCCTTGG
GGAGGCCCGTGGTGCCGGACGAGTAGGGGAGGGCCACCACGTCGTCGGGGTCGACCGCCT
CGTCGGCGGCGAGCGGCTCCTCGGGCAGCAGGGTCTCGTTGAACGCGAGGCAGCCGTCGG
ATTCGGAGGCCGGGCCGTCGACGGTGACCACGGGGATGCCGCGCTCGGCGGCGAAGGCGC
GCACCTTGTCGACGGCGCAGGCCTCGGTGACGATCAGCCGCGCCCCGGCGGCGCTCGCCT
GGCGGTGGATCTCGTGCGGCGTGCAGAACGGGTTGGCCGTGGTGGTGGCGGCACCGAGCC
GGGCCGCGCCGAGGAACACGAAGGCGAACTCCGGGCAGTTGCGGAGCAGGTTCATGACCA
CGTCGCCCTTCCCGATGCCGAGCTTGCGCAGGCCCGCCGCGCACCGGCGGGAGAGCTGCG
AGACGTCCGCGTAGGTGTGCACGGCGCCCGTCTGCCCGTCGATGAGGCAGGGCCGGGCGG
CCACCTCCGGCAGCCGCTCGAAGCAGTAGGCCTGCAGCGTGAGGGGCCGCGGGCGCTCGC
CGTCGTGGAGCCTGGACCGCAACGCCGCCACCGGCGCGTCC