morexGenes - Barley RNA-seq Database

Contig contig_57423

Source Contig contig_57423

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_57423 (2816 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_57423

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_70092	2	2257 bp	AK367003	Available	Available	None

CDS Structure of MLOC_70092

Contig Sequence (2816 bp)

>contig_57423 2816 assembly3_WGSMorex_rbca.fasta
CTCGAGAATAATCAATAAAATGGCCGCATGCATCTCCCAGATGCAGAGGCCGGGGGTCAT
CCTCCTTTTCTAAAAAAAGAAAAACAGTATTTCGAAGTACATTTTTCTGAACAGGGTGCC
CTTGTCGGCATATAAGTTTCATAAATTACAGGCAGTGCTCAACATTAAACACTACACTAT
CCTCATGCATAACTAAGGGCTGGATCTGATTAATGGGAGATGTGTCATTCGGCCTCCCAT
GATTATCATCCACACATAAAAAACAAGAAATGTGGCTGCAGAGCTCAGTCTATAATGAAG
GATCTTAAGTGCACATTTTACCAGATATGTTCCTTAAGACGAATTGCTAGATGGGAGTCA
TGACAAGTTCTTGGAACATTACTTATCAGTGATACTTTCCTGAAATGATGCAACTAGTAT
AGTTGCGATGGTAATGTGATACTCCTATATCACACAGACTTCTAACATACTGTAGAGTAC
GTGTGTATATTTCATCAGCGTGAAATAAGAAACGCATGCCTCTCACAATAGCTATAGCAG
GAATTCTATTAGCTTGCTGCAGCTCAAATGCAAATTCAGACACACATTAGACGCGTGTTC
AAGCAAAAAAAAATCTGGGCATAAGCAGAGCAATAAAAATGGAATTACTGACGTAATAAA
CAATGTGCCTCCGTTCCACCATAAAAATTTATTACCAAATCAACACAAACAGATGAGCAC
TCAGCATCCAGAATTTAGTTGTGTACTCTAGTCAATGTGTAGAGAAGACATGATAGCTGC
GAGTAGGTTCTTTGCATTTAAGCAATAACTCTAGTGTATTTACATAACACAATTGACAAG
GTATTCCTAGTCATCATGCAGCTAAGGTTATCATCTCCTAGACAAGTGGTAACATTACTT
AAACTAGCTTGCATAACTATCGGCATTCACCATAAAGAGCTCTGATAATAATTGACTTGA
AAGATCTATGCGGTCAATCAGAAGTTCAGAACACACGGTCTACATGAGAAGTGTTGCTAC
GAATGCAAGCAACTACAACATGAATCTGTGGCAAAGGCAAATACCATGATATGCAGTGTC
TTCACATTGGGAAAGCATTTGAGGAACCTGGGCACCATCTCTGCCTCACCCCGGATCCCA
AAACGCACATTTAAGCTGAGGATCTTCACGCTTGTGAGACTTGTGGTTGTGCTCTCCTTC
ATCCCAGCCTGAATTCAACCAATTTAGGACCAAAGATGACACATTTGAACTCATGGACCT
CCACCAGTGGGAGTGGGACATGCTATTTGCTAACTGCATAATTGGATAGACAGGAGACGA
GGATATTTACCCTTATGATGGTGTCTCTGATCTTGAGGACATGGTTTGCTGGCTCCAAGA
ACCCGACCACGCGCAGATTGGGGGCATCAAGAATCCTGATCCTGGTACACATGCCACCAG
CCAGATCCCGGCATCCATGCAGGATGAGCCGCTCGAGGAGTGGAGCCTTCACCATGGCAA
TGTCTTCCACAACAGAACCGCAGATCTGCACGCACCGTAGACTCTCGCTGACGAGGTGGA
GACGCAGCCCCTTGTTGCTTCCCTGGATGCTCAGGACCTCCAGGACGGGACTCCTGGCGA
CGATGGCGTCGACGTCCCCCTGCTCCATCACGACGCTGCAGATGCCAAGCTCGCGGAGGT
GGGGAAATGTCCGGTAACTTCCCAGGCGGGCCGTGTCCGGCAACTTCCAGAGGCCGATGT
AGAGGCGGACGAGGGTGTTGATGGTGAAGAGCGCGTCGGGGAGGATCACGTCGCACGGCC
AGGGGCGGTTGACGAGGACGAGGTCCTGGACGCCCTTGGCGGCGAGGAGCTGGAGCCAGC
GCGCGAGCTGGGCCTGGTACGCGTTCATGTGGCTGCAGGCGAGGGGGACGCAGCGGAAGG
GCCCCGGGTGCGCCTCGAGGATGCGGGAGACGACGGCGGTGATGGCGCGCGAGTTGGCCG
GCGTGGGGGGCCAGACATAGTCGTCCTTCCGGAGGTAGGCGTCGACCAGGACGGGCTGCG
TGGAGAGCCAGATCGTGCGCCAGCGGGAGGAGAGCGCGGCCGTGCGCGCGGCGTCCGAGG
CGGGGAGGCGGGAGACGATGTTGCACAGGAGCGCGCGCGGGAGGCGGCTGATGCGGTCTA
CGCCGTCGGAGACGGGGCGGGCGACGAGCCGCCCGGTGGCGGGGAAGGGGAAGTCGGGGA
TGAGGCTGGTGCAGACGTACGTGAGCAGCTGCTCCGTGGCTCGGTCGAGCTCGAGCGGGT
CGAAGCCCATGCGCTGCAAGCCGGCCGCCCTCACGGGGTCGAGGTTGGTGTACGGCGCCC
GCCCGGCCATGGTCGACGGCGGCGGATGAGCGGGTGAGGTTTGGGGATTCTTGGGGGGCT
CTCTGAGTGGCGAGCGGAGTGGGAACCGAGCTCTTATATATCGTGCTCGATTGCGTGGTG
GCCCAAGGGCTTCATTATTTCAGTTGGGCCGGTTCCTTAGGCCTCGTTTGGTTGCAAAGG
ATCGGAGAGGATTTAAGAGGATTTTCCTCTCGTGGGCCAGAAACCTCGCAAAACCTCGAG
GGCCCGTTTGGCACGCGGGGTTTCCTTGGCCCAATCCCCGTCTAACCCCTTCAAAATAAT
CCCCGTCCTCGCTTTCCACGGGTCTCAAAACCCTCGAGGGCACCCTCGTGGATCCGTCGC
CCCTCCTCCTGCCAGCCGCCGCCGCCCCCCCCCCCCGCGGGTCCGGCCCCCCTCCTCCCG
CCACAACTCCTCCCCCCCTCCTCCTCCCCCACCTACCCCTCTTCTCCTACCTGCAG