Contig Data
morexGenes
Links



Map Locations of contig_57408 (5155 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57408

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70079 3 1508 bp MLOC_70079.3 Available Available LOC_Os03g18510.1, FRAME:-1, EVALUE:9e-175, 13103.m02218 protein expressed protein





CDS Structure of MLOC_70079






Contig Sequence (5155 bp)

>contig_57408 5155 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGCTGGAGATGCTCTTATCTTGCATCTCCATCAAGATGCCAAACCTCTC
TGCCTTTTTTCCCTCCTTCACCTTATTACGCGCGGCAATTGCCTCCTCCTTCTTTGTCAT
GTTGTCCTCAAATTTCGTCGTCATCTTCGTCGGTGTCCCTTCTCGCTTCTCCTTCTCCTC
CTCCCACTTCCTTCCCGGTTCCTAATCATCTTTCTTGGCCGAAACAAGCCTTTCTTCTGT
TGGAACGTTTGGATCGCCACCTTCATCTTCATTGACCATGGGGTTTTTGATGGAATTTGC
AATGAAGGAGGTCCACTTGCTTTGCTCATTCAAGTCCAACCAAAACCGCCTATAGATGAA
GTGATTCTTCTACACTTATTTGTGTAATTGCAACACGAACGGACTAACAAAGGAAGACAA
TGGATGGTCAACAACAAGGTGCGGCATTTAGCAAATCGATGAAATGACCAACACACATAG
AGCAACAAGACACAAAACTTATGAGATCTTTGACTGCCGTCCCGCTTGGCCACCGGTTTT
GGACTTGTTTGTCAAAGTTGCAAAACATTTTTGACGGCCTCTTCCGTGTTGTGGGAGTCA
TAGTGTTTTTCTTCATGAAACACTTGCCTCATGCCTGGTGCATTTACTTTTTTTTTCTTA
TCTCACGTAAAAACTAGTATCACTCGTCAGTCCAAAGCAAGAGGAGTGACCAAAAAATGA
GAAAAAATTGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCT
ACCACTAGACCACTGGTGCTTATTGAATTAAACATTTTTAGCACCTATGTGAGTGATTCT
CTATTAAGCAGGCAACTGTTTCAGTATCAGTTATCACCTAATGATTAAATATGAATTCAT
CGCCTGAAGCACGTCCAAGTGTCGAAACGAAACGTATGAACCGACAAACGGCTCGTGATT
AAAGTACTTTGATGATGAAGCACGTGTAAAGTGTCGAAAAGAAACGGCAATCCGCCTATG
TTTGCAGATGAGCTACCACGTGAATAGTCAAGAATTCAAAGAACAGGGCAGATAAGCTCA
ATGCCATACAACAAATTCCACTAGCGAGCAAAACGATAAGGAAAATCCATGTATAAATGT
TGATGAAAACAGGTACCAAAACCGCAATCAACAGTATTCAGCATCAGTGCTCAGAGAAAA
GCAAACAAATCCGCAAGACTACGGGTAGCCTACAACTGATCAATATCTAACAGGGTAAAA
ACTCATTCATCCAACGTGCCTCCTCAAACAGGAGGAAAAAACTAACATTCTTGCCTTCAT
TGCTGGCGCTATACAAGTAATCTCATCCCGCCTGGGAGGAGACTCAGTCCGCACCAGCGC
CAGCCTTTGTGAAGTCTACGTCTCCCATGCCGGTGTCCTCCTCCTCGCTGTCCTCGTCGC
CGTCGACCTCCTCGCCTGCTAGCTTCAGCTTCTCAATCGTGTCCGCAAACAGCTTGTCGT
CTCTCTCGCTCACCTGCACGAGGAAATTATAAGACATGAGTCATGGGCGGGGACTGAATA
GAAGCTTGCGGATCTCTGAATCGGCAGTGGTTTCTTTTGCTGATTTATTTGTTGAGCATA
GATAACGAGCAACTTACAGCTCTAGCTGCTTCCTTCACCACCAGTTTCCCCTTGTGCTTT
TCAATTGCCTCTGCGCAAACTTTTGTTGCATTTGTCAGAACTGCTATCCCCTGGTCCTGT
TCACAATAGCAATATACAAAATCAGCAAATTTCATGTCACTGGATCACTTGCTAAAATCC
ATGAATAAAACAATGAGATATGGGATCTGCTCAGTTGAGTAGAGTGATGTGTGAATACAA
AGTACCCACTGCCTTGCAACACAGAAATACTCAACACAAGGGTATCTGAATTTTAATGAA
ATTTAAAGGTCTCAATAATACCTGTGCATTCTCCATCCATCTACTAAAACATACAGTATA
TGCCAATTTTTCCAGCATAATAAATGACTACTACTCCCTGATTACTTACGTTACAAGACA
GACCGAAACATTATTTAAAATACTCCTCCATGCTAAGACTAACAGTTTTGTGTGTTGAGT
TTTGATTTATAATTACCTATGCAACAACAAAAAAATCAAGAATCAACATTAATCACATAA
ACGAATGGAAGAAATCACCAACTTTGTCAAGTGTCTGTGTGGTCAGAACATAAAGCGGAG
GAGCAACTAGCTTAATCTTCACAGGGCAATCAGCATTTCCAGCAGCTTCAGCTTTCCTCA
TGGCTTCCTGCAAAACAGAATCAGCAACTCACAATCAAGCATACATTTGGAAACCAAACC
GCATGGATTGAAGCAAACAGAACCTTAATGTGGAGGACACCATCAAACTGGAAGCATTTC
ATCTCAACATCAGCACGAATCTTGAGTGGCTGTGGTGTCATTCTCCTCCTTATGTTCTTG
ACCAGGGCATCCTTAACCTCAGGGGTGACAGCTGGCACAGTGTTAGTCACCTGCAGAAAA
TGCCAGCACAAATGAATCTTTAGAATCGTCGAATTTGCAGTTACATACTATAAAGGTAGA
TTAAGCATGCAGAATCAGCACCAGCCTATGTCAATATAGTATTTTATGATCCGCACCATA
CTGCCATAAGCGAACTAAATATATAGAATGCGTCAATTTGCTCTCCAAGAACCGAAACAA
TTCACTGTTGTAGAATACATTGTGATTAAAACAAATCACCATGATGACTAGTTCATCTCA
AACGTATCTGAAAGACAATGAAACAATGGTACCTAATTTTCAATTGCTTATACTCCCTCC
GTTCCTAAANNNNAGTCTTTGTAGAGATTTCACTAATGGACTACANNNNNATGTATATAG
GCATACTTTAGAGTATAGATTCAATCATTTTGCTCCGTATGTAGACCATTAGTGAAATCG
CTTAAAAGACTTATNTTTAGGAACGGAGGGAGTACAACCTACTGAACTTACCAATATAAC
TTACAATGTTAACATCCATTCAATCAATAGTGCGCAAAGAAGTACATTACCATATTTCAA
CAAACCAATTTGAAGCAATAAAATATTCCTTAAATCGACTATTTAAGCACACATTTACAC
AATCAAATTACAGACTCAGAACTAACCACTAGGAAAACTGTTCATGGGGCAACTTCGAAG
CAAGACAAAATAAACAGATCGCAGTAGAAACAAATGAATACCTACTTGGAAAACACATGT
AAACGATAAGTTGTAAGATATTAATTTTGCATTCAAATTTATGCTTAACTGTTTATGCAC
TGCTGGCTGTCTGACTTACAAATGAAGTTAGTAGGTTTACTTCGGTGAGTATTTGAAGCA
ACAGATATCGTTAAATCAAATAATTCTATACACATTAGGAAATTTAGTACAGGCTCCAAA
CCAACTAGTACTAGGAATTAACTGTCAAGTCACTAAACTACCAGCCTGAAGCAATTTGAC
AGCATTACCTCAAGTACACCCAATACTTGAGCAGTGAATTTTCTCAAGTACAGAAGTAGT
TTAAGCATGCATAATCAGCAGCAGCCCCTAAGCAGTATAAGATTTGATGATTTGTACCAC
AGTGCCATAAGCAAACTCAATGTACAGAATGTGTCGATTTGCTCTCCACGAAGATTCTCT
CTTATATACTGTGGTTAAAACGCATTACCATGATGATTATTTCATCTCAAACGTATCTGA
CAGAGAATGAAATCATGGACCTTATTTTGCATTAAAAATTATGCTTAACTGCCTATACAA
GCTACTGATTGTCTGGGCTTACAAGTTACAACTATAACTTAGCATATCAATTAAATCAAG
AGTTCACAAAGAACCAAGCATAGTACACTGTCAAATTTCAACCAACCAATTTGAATCAAC
ACATATTATTGAATCGACTAATTCGAAAAATGTCAGGTAATTATAGAAGTGGATGCTCCA
AATCAGCCACTAGAAAATCAACTCCTTAAATAATTAAGAAAATTAACTGTTCGTGAGGCA
ACTTTGATAGGGGACAAAATTAACAGAATGCATCAGTGCTAACAAACGAATACCTAGTTG
AAAAAACGCATGTGAAGGTCCAAACGGTTGCAAGATATTAGTGTCAAGTGATAAAACAAC
CAGCCCGAAGTGAATACACCCAAACATGAGCAGTTAATTAGGCATCAGCAACAAGGGGCG
GTAGTGGGGAGGGGGTCGGGAACAAACCTCGACGCCATCGGGTCCGACGACGGTCTCCTC
GTAGGTGAGGACGTCGAGCACGCCGTCGGGGTCGGTGACGATGAGCTTGAAGGCCTCGAA
GGCGTGGCCGTACCTGCGGTAGAGCGGCCAGCCGATGCGCTGGTAGAGGGGCTCGAGGTC
GACGCCGAGGGTGTCGGCGGCGTGGCGCATGATGGAGTGGACGAGCTTGGACTTGTTGTA
GCGGTCCTCGCAGGTGGCGGCCTCCTCCTCCGAGACCCTGCGCTTGGAGAGGTCGATGTA
GCCCTTGTCGCGGTCGACGCGGAGCACCATGGAGGGCTCCTGGCGGCCGACCTTGATGAG
GGAGGAGATGGAGCGGATGCGGCGGCGGGAGAGCTCGGAGAAGAGGATCATGCCCTCGAT
GTTGTTGTACTCGAGGAGGGACACGTAGGCGCCCATGTCGGCGATGTGCTTCACCTGGAT
CATCACCGCCGCGTCCACCTCCGGGAACCGCGGCTCGTACATCCGGCACTCGAGGTTCGG
CATCTTCGCTGGCGGCGGCGGCGGCGGCCGGAGGGCGGGGCGGGGAGGGGAGGGGAGCTA
GGGTTTTGGGGTGCGGCGGAGAAGGGGAGGGAGCAGGGTTATGGTATGGATTGGTTGGAT
TGGCGAGCGAGCTGCGAATCGACGGTGCGGCGGGGCCAAGGAGTACGTGAGCCTTTCATG
AAGACGCCAAAGGGGTATGCGTGTCCTGTCCAGTCCAGCCTCCTGTGAATACAAGTTTTT
CTTTTTTTGGAGACTACAACTTCTGCTTCCCGAAGATGCACGTGTATACTGTAGCTCGAT
TAAAAGAAAGTCGTGAATTAGCTACTACTCCCTTTGTATGATAACTAGCAAAAGGGCCCA
TGCGTTNNNNNNNNNNNNNNNNNNNNCACACGGCACACGCTCTTAATTTATAAAA