Contig Data
morexGenes
Links



Map Locations of contig_57360 (5869 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57360

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70051 2 1446 bp MLOC_70051.1 Available Available LOC_Os04g53850.1, FRAME:-3, EVALUE:2e-124, 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed





CDS Structure of MLOC_70051






Contig Sequence (5869 bp)

>contig_57360 5869 assembly3_WGSMorex_rbca.fasta
ATGACTTTTAACGACGGAGCCTATTACGACCAGCAAATTGTGGTCGTTAATGACATTTAA
CGACCACATTCTAACTTTTAACGACCACATATACCGTCGTTAAAAACTAGTTTTCTAGTA
GTGTATGTTGACTAACCCTCCTAACCACATGCATGAGTCTTGTGATGACGCAGGAAATAA
CAGCAACGAAGAAACGACATAAAACAGATCAGAACATGATGAAGAAAATCGTCCAACAGC
GCCATATCACATGTGTCGCGGCGGCGGGAGCATATCCTCCTTGGGATCTGCGCGCGCATA
TTCGGCGGGCCTTGCTGCTGTTACGCCTGGTGTAACTGGCACACCTGCACGCGCCCCAAT
GCCAGACACGCGGCGATCTGTAGCCGGTCGTGACAGCGCGCGTATTGCCACCCAACCGGT
GGTCTACAAGCGGTGCGATGCAACTCGCGCGACAAGCGCAGGACCGGACGCGAACTCCAA
CGGCCTCACGACATCCGGTCGTTTGGGATCCTCTGCGCCTCCTGAGCAGCAGCCCGCGGC
CACACAGAATGTGCACCACGTTCAGGCAACATCCGATTCAGCGGCGGTTGCTGACGCACG
CGAATCCGCCTCGAGATCAGACGCTGATTTGTCTCCTTGTCAGCCCACGGGATCTTCTAT
GCCATAGACCGACCCAACACCACGGCGTACAAGACTACAAAAGGGGGTAATTGCACCTCT
TAATTATAAACACATAACCAAATATGGTATGGTTTGTTCTACAGGTAACCTTGTGAGCCT
CATACACTTGAGGAAGCCCTTGGTGATGAAAAAATGAGGAAGGCAGTGCATGAAGAATAT
GTGGCACTACAGAAAAATAAAACCTGGCATTTGGTTCCTGCACAGCAAAAAACCTTATTG
ACTGCAAATGGGTCTTTAGGATCAAAAGAAAATCTGATGGAACAATTCATCGCTACAAGG
CGAGACTAGTAGCAAAAGGTTTCAAACAACGGTATGGTATAGACTATGAGGACACCTTTA
GTCCCGTTGTAAAAGCTGCCACCATCCGTCTTGTTTTGTCTATTGTTGTTTCTAGAGGAT
GGAATCTTCGACAACTAGATGTACAGAACGTGTTTCTTCACGGTGTTCTGGAAAAGGAAG
TATATATGAAACAACCTCCTGGGTTTGAAAACAAACATGCATTCTCTCATGTATGCAGGC
TTGATAAGGCACTGTATGAATTGAAGCAAGCTCCAAGGGCATGATATTCTCGTCTCAGCA
AAAATATGCAAACACTTGGCTTTGTTCCAAGACTGTTCATCTATAATAAGTTCAATACTT
CCATATTTGTTCTCACTTACGTTGATGATATTATTGTTACAAGCTCTTGTGATGAGGCAA
TAACAAGACTTTTGAAGGATTTAAGTGTTTAATTTTCCCTTAAGAATCTTGGAGATTTGC
ATTATTTTCTAGGGATTGAAGTAAAAAGGCACAAGGATGGACTTCATCTCTCCCAATAAA
AATATGCGACCGACTTGGTAAGAAAGGCTGGTTTGCAAGGTTGTAAATCTACACCTACTC
CTTTGTCTAGTACAGATAAGTTGTCTCTCACAGATGGAACACTCTTAAGTTAAAAGATAG
TACCAAATACAGAAGTCTAGCAGGTGCACTCCAGTATTTGACACTTACAAGACCTGATAT
TTCGTTTCCTGTCAACAAAGTGTGTCAATTCCTTCATGCACCCACCACCGTTCGTTTGAC
TGCTGCAAAGCATATAATAGATATGTGAAAAATACTTTGAGCATTGGTCACAACTTTGGC
AGGTCATCTTCAACTCTTGGCAGTGCCTTTTCTGACTCGGATTGAACAAGTTGTTTGGAT
GATAGACGCTCAACTGATGGCTTTGCAGTATTCTTAGGACCCAATATCATATCATGGTGT
GCTAGAAAACAAGCTACAGTCTTCAGGTCTAGGACAGAAACAGAGTACAAGGCACTGGCC
AATGCCACAGTAGAAATCATACGGGTGCAATCTATTCTTAAAGAACTTGGTATAAAAAGC
ACTCAAGCTCCTAGTGTGTGGTGTGATAATTTGGGAGACACTTATCTCTGAGCAAATCAA
GTCTTTCATGCAAGAACAAAGCATATTGAAATATATTTTTATTTTATCAGAGAAAGGGTT
GCTAGTAAACTCTTGGACATTCGTTTCATACACTCCAAGTATCAGGTTGCTCATAGTTTC
ACCAAAGCCTTACCCACACGAAGCTTTGAAGACTTCAAGCATAATCTCAACTTAATGAAG
TTGTGATTAAGGAAGGTTGTCAAACATGTGATCATGCAAGTTATCAGGAGGCATGACAGG
TTCAGTTTCAGGAAGATTATGCCGAAGGGATTCTGTTAGTCAGTTTAGATTGTTAGATAG
AGGATATCTTATCTCATGTAAACTTATCTTTATCTCTAACTAAACTTCCTCTCCAAGTTG
TGATCTCCTGTAACAACACAGCTTGTATGCGCTATCAGGGATGTGTACCCCTGTTATATA
AACACGTACGTCGCCCCCTCAAGGTGGTATGACGCTTTTCACCAATCGCACATAATGCTC
TTTCCACGAAGGATCATCGAACCGGACCATCTGCTGCCCGTCATGATCTCCATCCCGATG
GCTCCGCGGCCTCTTGGCAGACACAACATTAATATTGTCCATGGAGCATCATATCATTTC
TCTTGGAGTGATGATGAACTGGTAAATAAATATTTCCTCATCGGTTTATACTTCTACAAA
TTTGGATGCCTAAAACAGATGGTTTTCGACGGTGACATGGAAATAGTAATTTATTTACAT
ACTTTTGATAGAGTTCAGGATGGAAAATGCACTTTTTCCTTTCTTATAAGATAAACTCAA
ACAAGAAGATAGAAAATGTTACACGACTTTACCGAGTTGTGCTCTCGGTCAGCAATCAAG
AAATTAAACTTAAGCACCAACATTTCAACACATTTTGTGCTCTAGGCTCTAGCCTCTAGG
AGGATAGATTTATTTTTGCAAGCGCATAATCCCTGTCGTTCTGAGATCATTGAGTCGACT
CTAGACTCTAGAGAAGAGCCTGTTATATCAGTATTTAAGGAGTCCCAGGGTCCTGCCGTA
GACGACGAGGTCGTCGTATATCTCGTCCAGGTTCTTGTACTTGTACTCGAACCCCTCCTT
GATGAGCTTGTCCGACCAGATGCTCACCCTCGGCTTCTCCGGAAGATGACCAATGCTGCA
AAGCAAACACAGGGTCACGTTTGTGCTGTGCTGTGCATGTCGACTGTGGATGCGGCCAGG
TGAGCTTGCACGTACGTACCGGTCGTCGTTGATCTCGTACTGCGGGTACTTGGCCGCCAG
GAAGTGGGCGAGCGCCACGGCGGTGGTGTTGAGGGTGCACACGATGTACCGCCCCGACGT
GGCCTCCTCGGCGGCGAATATCTCGGCGCGGCTCACGTCGTCGATGTGCACCAGCGGGAT
CGACCCCGATGCCTTCTCGATGAGCTCCAGGTTGTCCACCATGTCGTCGTCGCCTGAGGT
CGATCCGTCCATCACGCGCCCCACGTTATTATAGCAAGCACATGGCCATGCATGGCGTAG
CGTTGAAACTTGAAGCATTATATATAGGACACGTCGCCTGACGTACCGGAGAGCAAGGAG
AGGACCTCGGGGACGCTGGTCTTGACCTTGCTGGCCGGTGCCCCGCCGACGACGACCACG
GGGCACACGGTCACCAGGCTGAGGCCCTTCTCCTCCGCGAGCGCCATCGCCGCCTTCTCC
GCCAGCACCTTCGAGGCAGGGTACGCCTGCAGCAACGGCCAAACAACACGTACTTACGGC
GTCGTTCCAAACTCATATGCTAAGTTCTACTGGTTGATGATCCATCGATCGTACGCACCC
AGGTACCGCTCTTGGTGGCCCTGAGGTACTCGACGTCGGACCAGGAATCCTCGTCCAGGA
CATGGCCGTCGCCTTCCAGCGGCCGGCTGGAGATCGCGGCCGTCGACGATGTGAGGACCA
CGCGCTTCACCGTCCCCGCCTTCACGCATGACCTCATCACGTTGAGGGTTCCTTGAATCG
CCGGCTGGATCACTTCTTCCTGACACGACCAAACGAATTAAGAACAGCATATATGCCGAT
TTGTCTCCTTTTCCCAAAAAGACAAGAACAGTATCCCGATTTATGGCTGGCATGCCATCA
CGGTGTGATATTACTTACCTCGGCGTTCTCTGGCATGAGGGCCACCGGAGCGGCGACGAG
GAAGGCGTAGTCGCAGCCGGCGACGGCGTCGTCGAAGCTGCCCTCTTCGTTCAGGTCGGC
GCGGAAGACCTCCAGGGGGCCGAGCGCCGCCAGGGTCTTGAGATGCGCGTTCTTCTCCCC
GTCATCTGGGAATCCAAGACATCACACCACCAGTTTCAGATGCCAACAGAATCGATCCCT
CCACGGGCTCCATCCGTACGGCCTGATGGTTTCACCGGTGGTAAATATATAAGGCTCAAG
TAATTACCGGGGTTCCTGACCGTCGTCTTCACGGCGTAGCCCTTCTCCAGCAGCATCTTG
ACGAGAGCCGACGCGATGTACCCGCTCCCTCCGGTGACGCACGCCGTCTTCCTCCTCGTC
GTCCCATCACCAGCCGCCGCCGCCATATCGCCGGTGATCACTACTACAGTTCTCCTGGGC
TCCTGGCAATAACTGAAGCGCCGGAGCTATGTTCCTCTGGTGGAGTGGTCAGGCAACTGG
ATTGTGCTTGCACCGGCACGTGCATTTTGTAGATGTAGAGAAGGCGTGGTCGTGGCTGGT
GGTTTCAGTGGTTGGGGAGCCGCGTTCAACACCATCCACGCAAGTCGATATCAAGGATGA
GGAATGCATGATTGGGGACTGTTTTCACCTGGAGCAAAATGATGCGTAGGACTAGAGTCT
ATGAGCATGAGGAGCACGAGGGAGCTGTACAGTTACCTCTTTATCCGGAAAAGAATATAC
AGTTATCTCTCATCTCCAAGGCTATGTGTATGTGAGTGCTCGTATGTGAGCCCAAACGGT
GACGTGCTGCCGACCAAAAGAGGCCGAGGACAAGAGGATGGATAAACCATATAGTATTAC
TATAGTTTTCTGCATAGTCAATGTCTAGTGGACAGTGGCCGGCCCCGAGCGCGACGTGCT
GCCAACTAAGAGATGATGACACGTCAAATAAAAAAAATCTAATAGATGATGAGGACTAGA
TCACGAGGAAACTATACAATTCTCACCCTAGTCAAACAAATGAATTCAACTCAGCCTCTC
TATGTATACATAGACACATGTGTAGCATGTGTAGGGTTTGCTGCCCCACCCACCTTCGGG
GGCTCAACATCTTGCGCCTTGCAAAGTTTGAAAAGGCTCTCGGCTTGCATTGGTTGTGTC
TGGAATGAAAGGACCCGGCGAGGCTTTGGGTCCCATTAGAACCCTTGTAACGAGGTGGAC
ATAAACCTTCTACGCATCCACGGTCATCGCCCTCAGCAACAAGCCAACAATGAGAGGACG
TCCTTCTGGGAGACCCCATGGATGCAAGGGAAGAAACCTAAAGACATAGCTCCCTCATCT
TTGCGGCCTCCGGACGCAAGGTTTGGACTGTGAGCTTGGTCATGTGCAATAATGCTTGGG
TTCACCAGATCAATCTGGCCACTTTGCTCACTTTGGTGCCCATCGTTCATGTGACAGCCC
GGGACCGACGTTCCAGAATATTCTCCTTTATTTTTTGTTTTCGTCGTGTGGTTAATTTTA
TTTGTTGCATCATCATTTAGTTTGCATCGTCGTATCATGCATGGCATCTTGCATCGCCTG
TCGCGTGTGGTGTTTTGAGTGTGTGTGCTTCGAGTGTTCACCGAGTCTT