Contig Data
morexGenes
Links



Map Locations of contig_57327 (5481 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_57327

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70036 1 1111 bp AK353826 Available Available None





CDS Structure of MLOC_70036






Contig Sequence (5481 bp)

>contig_57327 5481 assembly3_WGSMorex_rbca.fasta
GGTGTCCCACCGAGCCCGCACTGGCCCCGGCATCGGGCGTGGCCTACTATGATGGGGGGA
GGCGGGCGCCGGCTGGGGGCGCGAGGCCCGCGATACTAGCGCCTGCCGCGACACCCATCG
CCCTGTGGGTGCGGACGCCGGCCCGACGTGGATGGCTCGCTCGCTAGGGGAAGACCCGAC
CGCTCGGTAGTCGTGCGTTTTGTGAGTGCGCGCGTTGTGGTAGGCGCATAACATCCCACC
GTCTCTTTCTGGCGCGCCTCCGCATGGGCTGGGCGGCGGCCCGAAGTCGGCTATCGGAAC
CCGGAAGGGCAGGAGTACAACGTCAGGCGGACACTGCTCGCCCCCGCCCCCCCAGCTGGG
GACCAAGCGGGCCAGCGCGTATTTGTGAAGGCGGCTTGCTGACCGAGCGTTGTGCCTCTG
ACGCTCGGGACCGAAGCGGGGCGTAGGGCGTCAGAGCCCACTTGGCGACGGCGACGAACT
CGGCGATGTGGCCCATCGAGGCGTCGTACCCTTCGTCTGTAGGGTGGTGGCGAAGCAGTT
CGCCCGCCATGAGCAGCGCGTCTTATGCGTTGAGATCTCCCACGTGGACACAAGCTGGTG
AAGATGTCGCAGGGGGCGCGGGGAAGCTACCGTCTTGCCGCACTGGGGGCTGTGGGAAGC
CGTGCTGCTCGCGGGCGGCACGAGCAACAATGGTGGTGGCCGCGATGCTGGTGGGGCGGC
AACGGCCGCCTGGCACCGAGCACTCGGGGCGCGTGGGGGCGAGCGTCGACCATGGGGTTG
GTGAAGCTGGAGCCTAAACTGGAGCAAAAGATCGGTTGCTCACCCCTACGCGGCGCTCCA
AATGTCGGAATCGGGGCTCCGCGTATCCGGAGAAGGTTCGAACTCTGGGGTGCACTTGCT
CTCCTACCATGTTCTACCTCTCAACTTCACCGCAACTCTCTGATGGCTCGAGCTAAGGGA
AGAGAACTAGAGCAAGCGAGCAGTTTGCACATGTTTGGGCCACCTTGCGGTGTAAAACNN
NNNNNNNNNNNNNNNNNNNTGCTTGAGGTGGAAGACGAGTACAAGGGTGGGTTCTTGCCC
TAGTGGAGATAATGAGGATCGGATCCCTGCTACAGAGACCGACCTCTCTATTATACTGGC
CATAGTCCTCTTCCCCACGAAAACACACTCACGGGGAATGATCGCCACAACGGCCATTTT
GAAAGGGGACAGGACTCCGGCTCCCCTGGCAAAGGTGATCTTCGCCTGCAAAATCCATCC
TCCATGACGTGTTGGGGAGCTCGGGGGCAACCTCCGCCCTGCCGAGCCCACAGCCTTAGT
CCTCTTGCACATAACAGGAAACCTTTGGGGGTTGCTTTGGGAGCCCACCAGCTAGCCCTG
CTTCCTTAGCACAGAAGTGGAAATCCTTCTTGTCCACGCCTCCTGGCACCACTCATGTGC
CCCCTACGTAGCCTGCGTCACTCACGTGACTGCACAGGGTCATGAGACCCTACTAGGTCG
CCCTTGGCGAACCCGCCTCGCGAGAGCCTCAGGAGTGGCCTCAGGACGTGTCCTCGTAGC
GTGCAACCCCCTCGTGGTCTTTGGCGATGATCGTGAGGTGCTCGCTTCGCGAGGCGAGGG
CCCTTGCGAGGGTCTCCCTTGTTGGGCTTGACGATGGGACGAGCCGGGCTTGTGTAGCGT
GTCGCGCCTGGGGCTGCAGGCCGACGGGCCTGGGCACCCCCGGTCCCAGGGGCCCAACAG
AATCAACCCAACATGATGAACATGAATAGACAAAAAATCTCAGTGTCCTCGGGAGCGTTT
TCCTCATAATAGAATACTTTTCGGCTTGTGTTTTGCTAAAAAAGGATTGTGATATCTTGT
TGCATACTTGTTATCATTGAGTGCTTGTTACTATTGTTATTTATCACTTGTTACGAATTA
TCTTGCTATAAAATTATCTACCAATGTTACTCATAGCACTTGCATATAATACATAGCTGA
AAACTGCTTATCATTTTCTTCTGCTCCTTGTTGAATTCGATACTCTTACTTATCGAAATA
ACTACGATTGATCCCATATACTTGTGGATGGTGCCTTACCGCACAATAGACGCACGTGCG
ACAACGTTCGTGATGGTGCTTCAGGATTCCAATGTATTGCGTCGAGGATCAAAACGAACT
TGTCAACGGACCACTGCCGTCTCATTCTTTACTGAGTTGGAGGGTTGTCATCTTATCCAT
GGAAAACGCGTCAAGTTATCACTTCGGGTCGAAGCACTAAAAGAAAAGGACCGGAAAATA
CGGCGGTATAGGAACCACAGAAACCCAGGAGGCTTTGTTCGTTTGCATCGATGTATTGGG
TCATCGTTTTCATCTGTTTCGACGCACACGAACAGGCGCGAACAATTTGAATCGGCGCGT
TGGAGTAGTAGAAATCATGCCTTGATAGTAGAAACAACTGTTGAACTAGGAGGGAGATGG
AGGTGGTTCTTTTGTGGGTGTCCTGGTCCAAATGCCAATTAAAGCAAGGCACATCGCACT
CCACCTCGCCCCGGCTACACGAGTAGTAGCAGTAATAGCCATCTTTTTTTCTTTTCTTAA
AGTACTAGTACAATCGTACAGTCCTACAATCCTAGTCCTCCGCGTCTCCCGAAACTAAAC
CCAGCACAGCGTGGCGTCGGCGTTGGCACCCGCTGGAAAGGGAGAGCTGGCAGCTTGCTA
GGTGCAGTGGGCGATGGAGGACTGAAAGGCGACGGCGAGCGTGACCAGACGGTGCGGCGG
ATCGCCTGCGCCCGGGGCGAGGCGACGAGCAAGCAAGTACGCCCGCGCCTGTGGGTCCTC
TAGGGGGTAATTTTGGTGTTTTGACCCTTTCGTCTAAGTTTAGCCGAATTTGATTCTGAT
GTAGAAAAATATTCGGATCTGACCCGTTTGCTACCGCCGGACCCTGGTAGGGTTGCACGT
AAAAAACTCTAAGTTGCAGACACAATACGCGTGTGAGCGTATCGTCGGATCCTTTGACGA
TAGGATTACACATGCTACCGTCAGGTCCTACGACGATATGCCATTTTCCAACCGCGAGGG
ACCTCGGCAGTAGGTTGTCATACCCTACCGTCAAAAAGTTCGACGGTAAGAAAAATGTCA
GATCTAATTTTTTTTTACGATCGAGGACAAATCTGACTGAACTTAATAAAAAGATCAAAA
CAGTGAATTTGTCCCCGCTAGGGAGGCCGCGGGGTTTCGGGTCGAGCCTTTTCTCCTGTC
GTGGCATTTCTTTTCCTTATTTCTTCCTTGGGACGGGTCCGTGCGCGAGGTGGTGATGGT
GGATGCCCATCGAACGGGGCGTGGTCGCGGTCGGCCGTGGACCCCGGCCCGGCCCCGGCA
TACTCTAGTGTACACTGTACAGACACCAACCACAAGGAAGGAGCAGAAGCTACAGATATT
TCTACGTACACGCATGTGCTGTTGACTAACCGGCCGGGGCTGGGTTGGACGCCAGCTATG
CAAAGTGCAAGCTGCATGCAGCAAGGGCTGGCAGGTCAGACGAGCGCAGGAGTGAAAGAC
GTCGTCAGGGCCAGGCACGTCGATGCCGTGCGTGCATGGGCAGAGCAGCGGGGGCTCTGC
TTTTGGTAAAACGATTGGCGATCGGAAACGAGCTTGCATACTGGCAGTGGCAGGCATGAC
ATGGCGTGCCGTGGCGCCCTCCCTCCCTGCATGCATGCGCTACCAGGCGAGGTCGGACAG
ATGGGACGGCTCGCCCCAGTCGCGTCCACCCGGCAGCGAATGATCGCGCCGTGGAAAGCG
AGTGACAAGGCGTTGGTTGCGTGCGTGACCATACAAGCAGATTTTCAGCAGACGAGATTA
AAAGAATTCCGGGCGGACCGTACGACCACGAGAACTGAGAACTCGTGCCTGACAGCAGGC
ACACACACGCACGCACGCACCAGGTAACAGGCCTCGGCATCAGCATGAACACAAAAAATA
TTCCAGGTCACTTCTCCAAGATACTCAACGGTAGCAGCTGCTAATTAAGCGACGAAACGA
TGCCAGGCCCTCCCTACAAGTCACCCGCATGCACGCGACGCATCCAACCCAACCCAAAGG
CTATGAGGATCCATGTCCCCATCGTCCACGTATCAGGGAAGGAAGAAGTTGGTGGCGTCT
TGTTATGCGGACAGGCACGAGGCGTTGCCGTTGCTGTCGTCGCTGTATATGTTCTCTGCC
ACCTCCCAGATCTGCAGCACGTTGTCCTCCGCCACGCTGGCCACCACCCACTTCTCGCTG
GGGTTCCACGACAGCTCAGAGATCTTGGCCGTGTGCCCGCTGTGGACGAAAAGCAGCTCC
GGCGGCCCGTCGCCCGCGTCCTCGTCCGCCTGCTCCTCGCCGATCCTGAAGGTGACACAG
CAGCATATGACAAAATTCAGCCACAACTGAAGCGGAAGATGGCAGATCTGTCAAGTCACA
AAGCTCTCAAAGGCAGTCCACAGAGCAACCAGGCGTTCATCTTACAGCCAGTGACCCAAG
ATGCGTTAGCTTTTTTATTTACACAGGGTAAAAAATTGCAAGTTTGTTACTTATAAGGTC
ATAGAAGCTATCGCGCTTTGTGTCAATCTTGGAAGGGTTAACGAGTAAAATAACAGTGTG
CCAGCAACAAAAATGAGATGCCACCTGCAAAATGTAAGATAGAATACGGGAGCAGATTTG
ACTAAGCTTACCTGCTAACGTCCCATATCATCACCCTTTTGTCTGCAGCATGGGAGGCTA
ATACAGTCTCCAAGTTTGGATTCCACTCGACCTGGAAAACCTCGCCCCTGCACGTGCAAA
TTGCGCAACACAACAACAAGTCAGATGAGTAGAGCATCATAAGGATGCAAAGCAGAAGAA
TAGCAGGTAGACTGACCAATATAAGAAGCAAAGAGTTGCAGCATGATAAGAAAAGAGAAG
AACTGACTGCAGCAAATACATAAGAAGACAAAAAAAATAGTACATACTCATGGTTGTGGA
AAGCATGCAAGCTTCTTGATAGTTTTCTCAAGTCAAATAGCTTAATAGTCCCATCACCAG
ATGCTGTAGCCAAGATCCATTCATTAAATGGATTGAAGGACAAAGAGTTAACCTGACAAA
GTCATTATATACATCATCATGAGCATACTAATATAAGGAACATATTTTTTCACAGAAACA
AACTGTAGGTGCCAGCATAAATATTGATATTCTCTATTCACAATGCAGAGCCACATATTA
CCAAACGTTTTGTCATATTCAAACTCAAAGCCATAAACATAAAACAATCACACAAGCGAA
CTTCAATACAGTAGGTACAGTCACACAAGGAAACTGATGGTGTCCCAACTAGAAAAAACA
TCTGCTGGTGAAATTTTTGAAAGAAGCCAGACACAAGGAATAAGCATATCATTGCAACTT
CAGAAAACAAGCTTCACATACCACTCCGGTACATAAAGCAAAGGTCTTGCTCACTAAAAA
AATGAGTATAGTGCAGCTATG