Contig Data
morexGenes
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Map Locations of contig_57315 (4395 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_57315

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70024 2 1066 bp AK364849 Available Available None
MLOC_70023 1 1007 bp AK371886 Available Available None
MLOC_70025 1 262 bp MLOC_70025.1 Available Available None





CDS Structure of MLOC_70024






CDS Structure of MLOC_70023






CDS Structure of MLOC_70025






Contig Sequence (4395 bp)

>contig_57315 4395 assembly3_WGSMorex_rbca.fasta
ATAAAATAAGACAAAATTTACGGAACGTAAAATTACGGTGCATTGATGTTAAAATAGAGG
GGGGTGAAGNNNNNNNNNTCCTCACCCAGGGTGACGAATAGCGACCAGTGACTGAACATA
GCTTGGTTGATTTGATGAGGATGAGTTGCTGCCTTACACTCCAACATATTAAGCTACTCG
TAGTACATCTATTCGAGTGAAGTATGGTATTTTCGTTTTCTGATCCACATATAAGGATTT
AACTACGTAGTATCTACATACGCACCTGCTATTTCCTAGCTGCCCTTCTCATTCTGCCCT
GCTATTTTCTAGCTGCGCTTCTCATTCTGCCCTGCTTTTTTCTAGCTGCGCTTCTCATTC
TGCCCTGCTATTTTTCCAGGACCCTGAGGACAAGAAGATCATCGTGTGCGACGAGAAGCT
GAAAGCCCTGTTTGCAGGCCGAGAGCGTGTTGGGTTCCTGGAGGTTGCCAAGCTTCTGAG
CCCTCACTTTGTGAAGGTTCCATGAAGCCTCTTCCGTGGAGTAGTCGAGTTAGCGTAGAT
GGTTTCTACTTTCTGGTGGTCTCGGCGGTGCGTAGGTTTGTCTTGTTGGTCCGAGTCGGC
TCGACTTCTAGGGTTCTTTTGCTCTCTGCGGACAATGATGTTAGTGTACTTCTGGCAGTA
ACAATATGGAACGTCTTTAACAGCTTTAAGCTCTTATGCTTGCAGACGGTTTGTGTATGC
ATAGTGTTCTGGCATCTAAGCGTCGCAAGTCCCGTGTTGCTGAACCTATATGAGGTGCAT
ACCCAATCAGCTGGTCTGAGGGCTTGGAGTGCAGAGTTCACTGCGGCATGAGCGAGTGGC
AAATCCACCAAACTGAGCACACGCAATGTTGAGACGTGCAGAGGCTGTCCAATTTGCGCT
CACGTTCGCTCTTCGGCAGCCTCAGTCATGTTTCATTGAGGATCATATGGAAACGCGAAT
CATACGGAAACGAGATGGCCGTGGAGTTGTTCTGGCGTCCCCCCTCCTCGTGCCCGCTTC
CCACACGACGATGATCCTTCGAGCGACGGCGAGGTTGCTCTGCAAGTTGGGAGGAATGCA
CACTGCTGCAGCGTATGGGACGCATAAGCTACATCTTATGGTGGACAGACGCCTGGGAGT
GCAGTCGCTCCGCTGGCGCATGCCACCGCCACCACATCAGATGCCCCGAATGGAAGTGTC
CGTGCAGGTCCATTCCTTCAGATTGGCATCTAAAAATAGTCCGACGTGTGTGGATGCCGC
AGAAGCTTTCGTGTGTGGATGCCGCAGAAACTTGAAAGCGCATGTAATTCCAATGCAAAA
GGGAGCCACTGGAACTGCGGGGGTATGGGAGATTCCAGGCCTAGGAGAGGAGGCCGGAAG
GACATGTTCTTTGCACCATGAAGGGCACCACATCTTCAATCCTTACATGAAAACTTGTGA
TTCCTTTGGTGCGACCGGAGAAAACTTGTACTACTAAATGATGAAAATGTACGCATCCAA
GAACCACTGCAAGTTGTTAGATCCATCCAACGAAGTTTTAGTTTTAGATCCATCCACAGC
AGCGAAACGAGGAGGGTTCAAGTGCAACTGGAACTGGCTGATTATAAATCCTGGTAACAT
GGATGACAAAGAAGAAGACGGAAGCTTTGTGGGGGTACTGGCTGCGACCTTGGGCGATTG
CTATCATACGTGTTGTGATTTTCCTCATGTTATCTTTGAGCGCCATCCCAAAGAAGCGAA
CCTTGCTCCCATGAACTGGAAAGTCTAGCTAATTATGTTTGATGGTAAAAAAGGAAGGGG
CCTTTGTACGCCGATTTGGATGAGAACATTGCAAATTCCACTCTCAACCATCCTCCTATG
CAGGAGCAGGTTGCATGCACCTCACTGTAAGCCTTTCGCTTGGTACGCATCACTATTCAC
TACTGAGCACTGAAGTTGTCGCTAGAAACTGCCTCGGACATTTGGCAGCTGATGGTGCCA
CTGTCACCGTGCCAGCAGTGCACACGGATAACTCGGTGCCGGAATTAGGTCACGGTAAGC
ACTCGGAGTTCCCACTAAAGAAACAATTTTCGTCGACAGTGAGTGGATCAGCACGAGAAA
AAGCGCACGCCACTAGCTCAGAATTTTTCCCTTTTCCCCGAGAGCACACGAGGGTCTGAT
TGATAACCGGATAAGAGCCACACCACGACCGATGGTGCAAGTGCAACTAGCAGAGGCCGT
TTGCCTTTCACTCATCCACCAAAGCGAACTGATTCCTGATAAGCAAGTGGAATCATCATC
CAGCGAACACGAGGACGATCGATCGGAAAGTAGAAAGACAACCCGATTTCGGATTCCGCA
CCAGCACGGACCAACTCACATGCTGAAATTCGGTGTGTCCTTTCTAAAATTTCAGTATGA
TATATAGTGCTGCTACCGTTCTAGTAGTCCACGGGTTAACTGCTGGCTAAGCAGAGATAA
ACAAAAACAAGGAGAGTTAAATCCTGCAATTACATACGAAAAAAAAAATCATCTCTTCAG
ACAAAAGTTCCACGCGCCCGCACTACTTATGTACATCCGCGCATCTCTTTCGGACGCTGC
CACTGCAGCCTTGCGGGTTGCAGCTTGCGTTGCTGATCTGCAACCCTACCACCGTTTTTA
CCACCATGATCATATATATAGCCTGAGCTTCTGCGGCCCTTCTGGTCTATTAACCGGAGT
CACGGTAAGCCTGCCGTGGCTGCGCCGACTGGACGGAGCTGGAGGAGGAGTAGATGTCGA
CGGGGGCGCTGGTGCAGTTGCTGCTCGAGTCCACCACCTTGGTCTGGCGACGACCCCGGT
GCCGGTCGAGGTACACCACGACGACACTGATGTCGTCGTGGAAATGGCGTCGCACGCCCC
GCTCTATCGTCCTCAGGTCGTGCACGCTGACCTCTCTCTTCTTCGTGGCCTCCTTCAAGG
CGGACCGCACTAATCGGTTTGCTATACCCTGCAAAAATGATTTCACACAAGTCATTTCAT
TTGTTTTATCAAACCATTCATATCAGATCATCAACTGGTATTCATATATCGGAACCTACC
GTTCTTGGGTTCTTGAAGACAATTTGCACAGCAGCGTCATCACTAAGATGCTCCCAAAGA
CCGTCCGAGGCAAATATTATGAACTGATCTGTTGGTTTGAGCTTGCGGACATGAATTTGT
GGTTCAGCGCTAAGAGCTGGCCTCTTCAATGCAATAACAGGGCCGATCTGCCGAAATAAT
GGGTCCAAGCTATACTCCGGTTTCTTCAAGTATACATCACCAATGGATCTTGACACCTGG
TAGTACAACAATCAAATGTTAGCTCATTTTTTCTATCTATCTTTTGTTCTGCTTTGCATT
GCACTTCATATCATAGGTTCTCGTAACTCCTAAGAGGACAAACTAACTGATGACTGATGA
GTGATGACAAAAAGGCAAGCATAAGCTAATCACCAAACAATGACAAGTTTATTAGCTTTC
CAACGATAAATAGAGGATCTTATCACCAAAAGAGAGAAATTGCATATGGACTATAATTCC
AGAAATCCAGGATACGTCATGATCCCAGCAATCCTGGATAGGTTACAAACCCAGGAACCC
CGGATACGTTATGATCCCAGCAATCCTGGGTAGGTTATGGACCCAGGAATTCAGGATTGA
GGATACTATGTAAAGTTGCAACCACCAGGATTGCTGCAACAGTGTGCAATTTCAGTGTTC
GTTTTAAAGTAACAGAAGGAAAATTCTTCAGTATTGTCAGCAAGTTCCCAAAAACAGAGT
GAATATCTTCTTAAATTGGGCTAGTTACCATTTCTGACATATATCCTACTTCATCTAACC
CCTTACACAAAGCTAACTAAGCTGAAGACTGGACAAAAAGGGTCAATTTCTTTCCAATTG
TTACCTGAAAACACACTCAAGGCCAATGACATTAGTTAAGTTCCAGGATATGGGATGTAA
CGGCTCTGCACTATTATAAATTGGGGAGCTCTGGATCCAGGATATTTCAGTGTGCAAGCA
AAAGTACCAAAAATATCTAACGCAGGCAAACCGACGAGTAACCAAAAGCTGCAGATGTTA
TCATCAATCAGCGATATTTATTTATTTTGCCTCTAATCTCTGATGACAGGGAGGCATGAA
ATTAATCAGAAGGAATGACATCCTCATCATTCGGGCTCTCACCTGAATTATCCCCTTGAT
CCTCCAGGCGCCCCTGGTGTGCACCACGATCTGCCCGTCGTCGGGGTTCTGCGATGAGAC
CTCCATCCGGACCTCCTCGGAGGCGACGTTGTGGTCGGTGGAGAGGCGCTCGGCGACGGC
GACCCCGCCGCCGACGACGCGGCGGCCGAGGACGGCGCGGGAGTCGCCGAGGTTGGCGAC
GTAGAGCGTGTCCCC