Contig Data
morexGenes
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Map Locations of contig_57299 (5753 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_57299

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70006 1 706 bp MLOC_70006.1 Available Available LOC_Os06g08564.1, FRAME:+3, EVALUE:2e-41, 13106.m00899 protein OsRCI2-8 - Putative low temperature and salt responsive protein, expressed
MLOC_70007 3 1542 bp MLOC_70007.1 Available Available LOC_Os06g08560.1, FRAME:-2, EVALUE:0.0, 13106.m00898 protein multidrug resistance-associated protein 11, putative, expressed





CDS Structure of MLOC_70006






CDS Structure of MLOC_70007






Contig Sequence (5753 bp)

>contig_57299 5753 assembly3_WGSMorex_rbca.fasta
CTCGGCCGCGGGCGGGGGCGGGCCGGCGGCGGGCACCGCCTGCGCGTGGGGCGGGGGGGG
GGCGGCGGCCTGGCGGGGGGCGCGGGCCTTGCCTCTGGCTTCGGCGGCAGCGACGGACGA
GGCCATGGAGGCGGTGGCCTCGAAGTCGTCGTCCATGGCGGTGGGAGCGGGTGCGGGAGC
GAGCAAGAGAGTTTGGGGGAAATTGGAGGGAAGAAGTGTCCGCTTTGTCGCCGACTTGCA
GGCCAGGGAGGGAAGTAGGCACGCGCCGCTCGCGTCCGTTTCATGTCCGCGCCAATGCAA
ATCAGGCTTAAAATTGGGCCGGGGATGGATCGACAGGCGGACAAAAAACGGACACGCATC
CGTTTGGGTCGGCACGTTAGGCCAACTTTTTATCGCGCGTACCCAAACGGACGACGGCGG
ATGAAATGGATCGCCCCGTTAGAGTTGATCTTAGATCTTAGGATATGTACAATGATGATA
TTGTAGTGATGTCGGGTCGGATAATTGCTATTGCAGAAAGAAAGAAAGAACGAAAAGAAA
AAATAACAATAAAACTTGTTGTATCCCACATTAAATAATAGTGAAAAAAGAATTGAATGG
CTTCAGACTATATTTATTACCCCAACTTGAGCATCGCATCGAGGAGCTCCAAGCCTCAAA
GTCCACCTCATTGGACTTCAATTTGGATCCGGACATGATCGAAGAGGAGAGAAGAGGAGA
CGAGAATGAGAGTGATAGCTAGGGTTAAGGTTTGGTTTCTGCAAAAAAAAGGTTAAGGTT
TGGTTTCAGCAAAAAAAAAGGTTTAGTGTGAACAAGAACGGATGGGTCAAGACAGGTCGA
CATGGCGGACATGTTCGTAGAATCCAATATCCACCTAATATTTAAGATGAGCTTGAAGCG
ATGAGACAATTCCGATAAATGGCTGGCTTTTAGAAGATTTTCTCGGCGGTGTTTGTACCA
TTCGTCCGAACAAATAAGGTGGCTACGGCGAACGATTTGAGATGCTCTAATGGTGCGTGG
TTGGTTTTTCAGCTTAAGTTTGGTTGACCATTGATATTTAATGTTGGTTGATGTTTATTT
AGAGAATAAGAGTAGAAATTTTAGATTTTGTCAACCTTTATAACATGCTTTCTAATTTAA
AGAGTCTATAGATAATTGAGGTTTTCGACTGAAATTGGACACCCGATTTTGATCGGTTCA
ACAAAACTCAATTCCTTTATACTATACACCATGCTTTCTAATTTTTAAGGCATGACAATT
AATTGATGCCTTCAATTTAAAATTGGGTCACCCGATTTTGATGGGTCGAGAATTTCTCAA
GAAGATCTCCCATTTAATGTTTTTAATTCACTATGCTCCATGATTTTAAAACTATTTCAT
TCAATTAAGGTATTCAATTTTAAATTTGGTTTATGATTTTGATGACCAACGATTTTTCAA
ATCAATGAGCAGCAAACGGCCTATAAGACATATCACTTTCATGCACTCTCCCACCACCCA
GAAAAAAAAAGTGTCATCATGTGATATTATAGCATCAATATAGCACATGCAGCTGTCAAC
GCATAATTTTTCCTACATAAATATAAATTTGGTAATGGATAACAAAGACTCACACCACGA
AAGACCACCAAATCACCTCATTATAAATATAAAAAACACACTCAATCATCTCCCCCATCC
TTCAAACAAAATGTTCCATCAGTTCTAAAACATAATTCTTCAGAAAGTAAAATTTATTTA
ATTTTGACCAAGGTCAGAATAAAAAATATCAACACTCACAATAATATTTATTTTTCTTCA
TTTCATGATTAATCTAATCATATGATTCGATATTATGTACGGATTTTATTGTATCTCTTC
ACGAAATCGATCAAAGCTAAAATGTTAGATTTTTTAAGAAAATAATGGACCTTATATTTT
AAAATAGAATGAATATTTTGTTCTTAAGAAATCCGACCCTTCTATAGTCGGTATGAATTT
TATTTTTTTTGAGGGATCGGTATGAAATTTGGTAGGACACGTGAGCGTGTGATAAGCCCG
AGCTGGACCTGAGAAACGGGACCAACAGTCAGAACTTGCAGCCAACCCAGCCCGCACAGG
TCGCGATCTGCCCCCGCAGAGAAACAGAGCCGCGCACGCATCGTTGTTGGTCGACATCCC
TCCCGCAGTCCACACCTCCGCCTCCGAGTCCGGCGACCGCGAGCAACCCAGCCGGGAGAC
CGCAGCGAGCGAAGCGCGATGGGGATGTGCTCGTGCTGCTGCCGGTGCCTGGAGATCATG
TGCGCCATCCTCCTCCCGCCCCTCGGCGTCTGCCTCCGCCACGGCTGCTGCTCCGTACGC
CACCAATCTCACCTCCCCCATCCCTTTCTTCCCCCGGCTAATCAACATGTCCCTCCTCCC
CGTTTCTGCGGCAGATGGAGTTCTGGATCAGCGTGCTGCTCACCATCCTCGGCTACCTGC
CGGGCGTCCTCTACGCCGCCTACGTCATCTGCTCCGTCGACCCCGAACGCGTCCGCCGCC
GCGGCGACAGCGACGACGACTACATCTACGTCGCCTGAGCGGCAACCAGCCGCTGCTCCT
CCCCTCCGTCCCCCGCCGCGTGGTCTCTCTATGGGATTAGGTTAGTGGAATGAACCAGCC
ATGTTCCTGCCCCCCTGTATATGTATATGTAATGTATGTGTACACTTTGGATGACAGCTT
ATATACCTGAAACTGGATCCAGATTTGCTGGTACCGTGGAATGCAATTACTGCAGTACTG
CTTACTTGCCTGGTTCAGTTGTGATTCTTGGTTTATGAGCATTTCATCTGGGTTCATTTC
AACTTTGCTGTGATAATACTTGGATATAACAGATTCTATCCTAGATCCATTTCAGAAAAC
CTCGAGTTCCAACAAAACGATTCATAAACTAGAGGATCAGCCTTCCTATAAGCTCTTAGA
GCATCTCCAGCCGCCCACCCAGGATGCCTCCAGGACACCTTTTTAGGTTCGGTATTAGGC
TCGGGGACGTTTTTTGATCGAAAAACGACCCAGCCACACCCCCAGCGCCCCACCAAACGT
CAAAATAGCACCGGCATACCCAGACGAAACCCGGCGTGCTGGGGGGCTCTTGGGGGGCGT
CGGCACAAGTTTCGGCGAATCATGTCTCCCACGTGTCTTTTTTCTTGGCCAACCAAATCA
TTTCCCTCACAAACTTTTGATTGGGGTGGGGTGTGGCTGGTAATATGCCCTCCCCTGCAC
CCCTATTGTCGCCGGATGACCCCCAAGACATCAACTTTTTTGGTTCGATGGTGTTCTTGG
GGGCTCCAACGGCTGGAGATGCTCTTAGATGTGCATGTCAACTGAAGAAGGTATTAGATT
ATTAGTGATCAAAGTGAAAGATACAACTAAGCCCTAGTGTTTCATCTAGTAGTACAACAC
AGAGTGACACATGATTTTCCTAGGATCACATAGATGCCTTCGCGAATCGTGAGAATCTTG
ATCTGTTGTCATTCATAAGAACCTCTGGGTTTCCTTCTTCAACCTATAAATTTGGAGGAA
ATAGAGTTAGATAATGTGCTAACAAGGTAAGCCAAGGACATTTTTAATGATTTGAACATA
GTATAATCACGCTGATGCAGATGTCCAATGAAGGGCATCTGATTTTTGTTCATTTCGTTA
AGTATTTTGTTGCATCCAGATTTTGACTCTTCGGATTTATCGCTTCACTAAGAGGTTATA
AAAGCATAATGGCATGACTTACCAGTTTGCCTTGATCAAGAACTAGAATATTGTCCATCT
TCATCACCGTTGAAATGCGATGGGCTATGGTGAGGACCGTCATGCCTTTGCATTCAGCAG
AAATAGTTTTCTGTAACAGGAATGCTGTCTGATTGTCAACATTGGCTGTGCACTCATCAA
GGCAAAGTACCTGTAGAATCATGAGCAGGTTTAACTTCTTTCAGCAAAAGTGCAAAACTA
CGTGGCACACAACTTAACATCATTAGCTTTTGCTGCTGATGGAAGGCTCCAAAATACCAA
CATACTAGGGGTACCATTGCAATGGTAAAGTAGTTTACCTTTGATGATTTTAGGATGGCA
CGGGCGAGACATAGGAGTTGTCGCTGGCCTACTGAAAAGGATCCACCACTTTCTTTCACA
TGGATATCGAGTCCTCCTATTGATTCTATCTCTGCCTTCATATGACATTTTTCAAGAGCT
TCCCATATCCTGATATCTGTTGTTATACTGAAAGGATCTAGGTTTTCCCTGTTTGTCAAC
TGAAAATTAGAATGCTGGACAGAGGTTTCTCTGTTTATTTCTCTATAAATGTCCAGCCAA
TGCCCAAAAAATTGTAAAGACCAGAAAAGAGAGAAATAAGAGCAACTAATATTTTACCTC
AAAGAACCATCAAATAGAAACGGACTCTGGGGTACTACTGCAAAATGTCCACGAAGATCT
CGGACAGCAACTTTGGCCACATCAAAACCGTCTACTAAGATGCGACCATTGCAGATTGGA
GTTAAACGGAAAAGTGCATTCAGTATACTGGATTTCCCTGCTCCGGTCCTTCCTATTATT
CCAACCTAATAAACCAGGGCAGTTTAATACTAGTTTTCTGAATGATTCAACAAGAATGTT
CAGACAGTTACCGTACCTGCATGCCAGATGGAATATGGAATGAGATTTCATTCAAAGCCG
GTGGTAAATCCGGTTTGTACTTAAGAGTTACATGCTCAAACTCGATCTTCCCTTCTGTTG
GCCAACTTCTATCAGGAGATTCTGATCCCTGGAGTTCTTCTTGAGGTATACCAACATACT
GCAAGCATAATTGAATTATTATAGCGAAACATGCATGTCACTAACAGACAATTTATTTAT
TTTGTTTTTTACCTCAACAACCCTCTCAACAGAGATCATCTCCTTTTCCGTCTCTGTAAA
GGTGGTTAAGAAACTATTCAACAGAGATACAACAGGTGCTGCATACGATAGCGCCAGGCC
CACCTGCAATGCATTTTCTGTATTTTAATTTATATATATAGTTAAAATATAGCAATATTT
TCAACAGTAACAGAAATGTAACAAGCCTGTCGTGCTACTTACCAGTCCAGGTGTACCAAA
GTTAACAGGAGAGTTGCTATGGAAGCCAACAACGGACATCACGGCGATGAACAAAATGAT
CAACCCTGCCAACAACTAAATGATCTGCTAGTTACTACATTAACTGCACAATAGGCCTAA
CTGATAGAGAAAGATTCATGATTCCATAACAGGAGATGAAGTTACCAAAGAATTATACCT
GGAGTCTTAATGAGAGCCACAGACTAGCAGTAAGTTCAGAGTAGGATGTTTTCTGATATA
GTGTCAGATGTTGGACGAATCTCTCCAAGAAAAATCCCTGTGTATTTTACTGTCAATATC
TTGAACAAACCACATCAACACAAGTCACTTGTGGTTCTAACAGCTAAGTTCAAACAAAGG
TAAAGGTTCTGGTATCCTTAATGTCATTTTCCATAGTCTTAGTGTAATCAACATACCTCC
TTTTGGAACGCTCTTATCGTTGATGAACCATCAAGTGTCTCTGTAAAAGATGAATAGATA
GGTGAACGAGCAACACTGTCAAGTCGTCTTACTTCACGTGATGTTGACCTGTAATAGAAC
TGCACAGAGTGTTAGTTAGTTTCTCCAGTAGTACATCATATATACAGTGCGATAGATTGT
ACCAACTACAGAAAAATAAAGTACTCCCTCCGTTCTTAAATATAAGTCTTTGG