Contig Data
morexGenes
Links



Map Locations of contig_5726 (3780 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_5726

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69982 2 2063 bp AK372841 Available Available None





CDS Structure of MLOC_69982






Contig Sequence (3780 bp)

>contig_5726 3780 assembly3_WGSMorex_rbca.fasta
TGCGACGTTCCCCAACACTTTTCCCCCACGCGCGAGTTTGCCGCGTACGCTGGAGCGCGT
GAAACCGTCCCGCACGCGCTAAAATAGAGTTTTAGCGTGCGGGCGTGTTTTTTGACGCGG
ACGTTGAAGATGCTCTAGTAAGGAAAATAATAATTAGCAGAGCATGAATATTTTGTGAAA
CACCGTTTATCTTAGAAAGGGAAATACTTGCATGATGGATTAAACCAATTAAATTGGTAT
GCTAAGGATTTGTCTAGAATTACTTGACTTTCGGTACAAAAATAACTAGTGCACCACTGT
TTCAAATATATAAAAATGTGACTTGTGAGGATGTTTCATCATCGCTTTTGGTGAGAATTG
TTTGCTGAAAAGAGGTGACAGAGGGAATCAAAGGGAAAGTGTGGCCCTTTAAATCTGACA
CTGAGGGGAATAATGGCTCTTTAATATGATAAAAATGACACAATTTCTCTAATATAGTAC
TGTACAAATTATCACGATGACAAAATACATGGTAAACATTAGAATTCGATCTTTTTCACT
TCACACTGTTCAAATGATTCTTTTACCAAACTAATTTTTCCTTTACGTTAGCTAGCAGAA
CCGTAGGCAGATCAGAATCATGTCATCAACAATCAAACCGACAACATGAACATTTATCAT
ATCTGAACGCAGGGGTATTATCCACAAGAACGCGTGATAACATAGTAAACTCTGCTAGTT
CATTGCCAAATAAACTTGCTGGCGTGTTGCATAGAATGGGCATTTGGGCAGAAAAATATG
ACAAACGTGGGTACTAGAATGACAGAGAGATGCAAAATATGACAAATGTAGTTGCAAAGT
CACGGTCTCAAAACAGAATCAGTCTTCAGCTGGCACTGCTAATTCTATCTAGAGCGATGT
GGCCAATGCCGGGTTTGCGGACTTTTGATGATCCCCCAGGTTGCAATTTGAGGATTGGAA
TCCTTGGGCAGCTATCAGAAAGGAGAGCACATGCCCATGGAGAATCCTGGAAAGGAGGAA
GGCACATGGACAGAACACATCAGGAAGGACGGACGCACAAGCAAGAGCTCTAGTGGTCAA
CTATTCAGAAAAAGAACTACCCTCCAGATAACTAGTGGGCACGATGTTTAGACCTGCTCA
CATGCAGTTGCTAATGCACGCATCGCCTCATCCCTTCACATGCACATGAAGCAAATTCAA
AGCTATAGTAATAATAAACATGCTTATATGGAGCAAGTATTAAGATGGTGAATAAAATGT
GCCTGGGAGGTGGGTAGCCAGGCAAACACGAAGCTCGCACTATTTAGCATAGTGAATTGC
AGTGACATGAGAATTAAAATTGTGCTTGAAGTTGGTTACCTCTGTTTAACTGTTGGTCAT
GACATTGTCAAACAATCAAAGTGGACCATGCAGATTGAAGCAACAGAGCAATTATAAGTC
ACAAATTCACAAAGCAACCATGGCGTCCAAAGATATCCACAACGTTGACAATGACATTTC
CAGTACAGCTAGGAGTGAAGGAAAATCTTCCAACGGCCAAACAAGAAAATGCAGGACCAC
TAGACAATCAGGCGGTAAACCAGCATTTTTTCAAGAGAAATTATGATTCCAACTTGCACT
TCCTGTTAAGTTAGTTGATGTTTTTGTCATACAGTCTCCAGCAAAATCAGTTACAATGGT
ACCATGAAGCAAATGGTAATACACATTTTTACTCAAACTCATTCTCATCCGGGTAGAATA
CAATATGAATAAAAGTCCAACAGGAAATGTAGCTCAAAGTAAAGAAAAAGACTGGATTGC
TATAGTAACAAGTAGTGATCAGATCTTCCCATCGGCATAAACCTTCGGACAGTCTGAATT
TATGTTTCAGATTTCTAGACAATTGGCAATTCTCATACCATAGCATTCAACCATCCGCAT
ATCAAAAGTATAAGTAGTATCAGTTCCTTTAATAGGTCTAGTAGTTCATAATCAGAAAGC
CAGATCAGACAATTCGAGCACATGAACATGAGCACGTCGCAATTGCTATAATATCAGCTA
TACTGGTGACCAAAGATGCAAGTACATTTAATCTGTCTTAGAAAAGTTGCATCACACTAG
CACTCACGAATTCATGATGAACCAATAAGAAATATATCATAGTAATATTGATCAGTACAG
ACAAAAGAAATACTCCATCACACGAGTCGTATCCCCAGAGGAAAAGCTAGATTTTGAGAT
TGTCAGGGCAAAGACATGTTTTATACCACAGGTGCACGGCATATGCACCGCCATCCAGGA
AACTAGCATGAATTTCAGTAAGATATGATAGGGTTCAGACTCACGAGAGAACTAAATATT
GATCAAAGCTACTTCTCAATTGAACAAAAGAAACAGTCATGATATACTTCCTTCTCTCTC
GTGGTACAAATGTCACTAAAAGAATCTATCGTAGTCTTTGCAATGCACAGCCCGCTCCCC
AAAATGATTGAATAATCTTCCTAGCAGTGTCATCCTAAGAACCAACTAATGGAACTAGGG
AGTGATGCGCAGCTACAGGGAAGCAAACAGAAGCAACAGTTTTCAACACTAACTACTTCA
TGCTTGTTTCGTTTCACTTGAAGGCGCTGGGTAAAACGGGCCTCTCAAAATCTGATGAAT
CAAGTACTGGACTAGAACTCTGATACACACCGTCAGAAGAGGGCCATCCAGAAACTGAAT
AGTCAGTCATCTTGCGCTGCTGCTCGTGCTGCCGTTCCGACCACGTGAACCCTTGCCGTT
GCTACTGCCATGCTGCTTCTGCTTCACAGCCAACTCAGGATTGTAGTACTCAAGATACCA
CCGCACAAACTTCTTGAGCCCTGTTTGGAGATCAGTGGATGGCCGGTACCCAAGCTCCCG
CTGTGCAAGGCTGATGTTGGCATGCGTGTAGGGCACATCCCCATTCCTTGGCATCTTGAC
AACCCTCCTCACAGCCTTCACCTTGAGCATCTTCTCCAGTAAATCCACAAGCTGTGTCAC
CGGCACTGGAGAAGTGTTCCCCAAATTGTATGTCCTGAATGGCGCTGGCCCTCGCTTCTT
GCCGCCGCTGCCTGTGCTCCGCCCAGCTGTATCCAATGCCCCAATACATCCTTTCACAAT
ATCATCAATGTAGGTGAAATCCCTGGAAATGGTGGTCTGGTGTGTGCCTCCACCGGAGCT
CTCATAGACCGTGATTGGCCGACCAGCAAGAATATCCCGGGTGAAGAAGAAGTATGCCAT
GTCGGGGCGCCCCCACGGCCCATACACAGTGAAAAACCGGAGCGCGGTGAGCGAGAGCCC
ATAGATGTGGTTGTAGACATGAGCGATCTCCTCACCGGCCTTCTTGGTGGCCGCATAGAG
AGACGCGGGTCGGTCCGTCCTGTCATGCTCGGAGAAAGGCACATGGGAGTTGAGCCCGTA
CACCGAAGACGAGGATGCCCAGACGATCGCCGGCTGCGGGTCCGCGGCGCGAGCCGCCTC
GAGCAGCGCGACGAGGCCAGCGACGTTCGCCCGCACATACGACATGGGGTCAACGAGCGC
GTGGCGCACGCCCGCCTGGGCCGCGAGGTGCAGGACGTGCGTGAAGGGCGCGACGTCGAA
GAGCTTGGCGAGGAGCTCGGCGTCTGCGATGTCGCCGTCGACGACGTAGACCCCTGAGCG
CGCGAGCAGCGCGGCCCGGCCGCGCTTGAGGGCGGGGTCGTAGTAGTCGTTGAAGTTGTC
GAGGCCCAGGACGCCGTCGCCGCGGCGGCGCAGCGCCGCGGCGGCGTGGCAGCCGACGAA