| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_57224
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69959 |
1 |
1516 bp |
MLOC_69959.1 |
Available |
Available |
LOC_Os04g38560.1, FRAME:+2, EVALUE:0.0, 13104.m03703 protein pectinesterase, putative, expressed |
| MLOC_69961 |
1 |
473 bp |
MLOC_69961.1 |
Available |
Available |
LOC_Os04g38540.2, FRAME:-3, EVALUE:2e-38, 13104.m03700 protein aldose 1-epimerase, putative, expressed |
| MLOC_69960 |
1 |
1089 bp |
MLOC_69960.1 |
Available |
Available |
None |
CDS Structure of MLOC_69959
CDS Structure of MLOC_69961
CDS Structure of MLOC_69960
Contig Sequence (5733 bp)
>contig_57224 5733 assembly3_WGSMorex_rbca.fasta
TTAATCTACATTCTAAAATATGTCTATATACATCCGTATGTAGTTCACTAGTAAAATCTG
TAGAAAGACTTATATTTATGAACGGAGGGAGTATAGATATAGATATAGATATAGATAGAT
AATACGTATATGGCTTTAGCCTTCTTTGAATGAAAAAAAAAAACATCAGGTGCTTAAATC
GACTGCATGTTGCATTTTTTTGTCGAGAAACAAGCATGACCTATTTTAGAAGACAATGAC
CAGTCAGCGGGCGAAGAAACAGATAAGAACTCTCCGAAGAATGTTGTCACCCCATTGACC
AGGGCCAACGCGATCCGTAAATAGGCACTGCTCTTCTGTACGTCAAAACCGAACTACCAC
CTGCGGACAGGCCATGCCGCAAACAGCGCTGGAATCATTCACGCCCGTACCAAGAATTCG
TTCGCCACGGCCATGCATGCATCCTTCCCTTATAAATTGTGCTTTCCCTTGAGTTCCTCA
GCAACCTTTCTCGCCAGCCGAAATGGCAAATAACTTCCTCCTCGGGGGCCTGGGGGCAAT
CCTTGTCGTCGCGGTCGTGGTGGGCGTAGTCGCCACCGTGACCAGTTCCGGTAATAAGGC
CGGCGACAACTTCACGGTCCCGGGTGAGGCCACCCTTGCCACCTCCGGCAAGTCGGTCAA
GTCTCTGTGCGCGCCCACGCTGTACAAGGAGTCGTGCGAGAAGACCCTCACCTCGGCCTC
CAATGGCACCGAGAACCCCAAGGACGTGTTCGCCACCGTCGCCAAGTCGGCGATGGAGTC
GATCAAGTCGGCGGTGGAGCGGTCCCGCAGTATCGGGGAGGCCAAGTCGAGCGACCCCTT
GACGGAGGGCGCGCGCCAGGACTGCAAGGAGCTCCTGGAGGACTCCGTGGACGACCTCAA
GGGCATGGTCGAGATGGCCGGCGGCGACATCAAGGTGCTCCTTGGCCGCACTGACGACCT
CGAGCACTGGATCACCGGCGTCATGACCTTTATCGACACCTGCGCCGATGGCTTCGCCGA
CGAGAAGCTCAAGGCGGACATGCAGGGCATCCTGCGCAACGCCACGGAGCTCAGCAGCAA
CGCGCTCGCCATCACCAACAGCCTCGGCGCCATCTTCAAGAAGCTCGACCTCGACGTGTT
CAAGACCGACTCGCGCCGCCGCCTCTTGTCCGCGGAGGAGTCCAGGTACCCCGCGTGGAT
GAAGGCTCCAGAAAGGAAGCTGCTGGCCTCCGGTGGCTTGCCACAGCCGAACGCGGTGGT
GGCCAAGGACGGCAGCGGCAAATTCAAGACCATCCAGGACGCCGTGAACTCCATGCCCAA
GGGCCACCAAGGCCGGTACGTCATCTACGTCAAGGCTGGGGTCTACGAGGAGATCGTCAT
GGTCCCCAAGGACAAGGTGAACATATTCATGTACGGCGACGGGCCCAAGCAGAGCCGCGT
CACCGGCAGCAAGAGCTTCGCCGACGGCATCACCACCATGAAGACCGCCACCTTCTGTGA
GCCCTAGCTACTGTAGTATTTGGTGCAAGTTACTCCTTCCTATATATGCATGCATGCATG
CATGCGTACGGTTTGGTTAGGTTAGGTTAGGTTAGGTTGCGGAGGGCATATATATATTGC
AGGTAGTAGTAATTAACAAGGTACGTACGTATGTTGTGTGGTGCATGGTGCAGCCATTGA
GGCGGCCGGGTTCATCTGCAAGAACATGGGGTTCCACAACACGGCGGGCGCGGAGAAACA
CCAGGCGGTGGCGCTGAGGGTGCAGGGCGACCTGTCGGCCTTCTTCAACTGCCGGTTTGA
CGCGTTCCAGGACACGCTGTACGTGCACGCCCGGCGGCAGTTCTTCCGCAACTGCGTCAT
CTCCGGCACCATCGACTTCATCTTCGGCAACTCGGCGGCCGTGTTCCAGAACTGCCTCAT
CATCACGCGGCGGCCCATGGACAACCAGCAGAACTCGGTGACCGCGCACGGGCGCACGGA
CCCCAACATGAAGTCCGGGCTGGTCATCCAGAACTGCCGCCTGGTGCCGGACCAGAAGCT
CTTCGTGGACCGCTTCAAAATCCCGTCCTACCTGGGCAGGCCGTGGAAGGAGTTCTCGCG
GCTGGTCATCATGGAGAGCCAGATCGCCGACTTCATCAAGCCCGAGGGGTACATGCCGTG
GAACGGCGACTTCGGGCTCAAGACGCTCTACTACGCCGAGTACGGCAACCGCGGCCCCGG
CGCCGGCACCAGCAAGAGGGTCACCTGGCCGGGCTTCCGAGTCATCGCCAGGCAGGAGGC
CGAGCAGTTCACCGCAGGGCCCTTCATCGACGGCGCCACATGGCTCAAGTTCACCGGCAC
GCCAAACTACCTCGGCTTCAAGGTCTAATTAACCGCGCGCGCGTCCATCATTCCTCGTCG
AACCGCATGCATGCATGCATGCATGCAACGCCTTCGCCCTGTACGTACATGAGATACCGA
TCGAGGTAACGTATTGTGTGTACGGAAAGTGTGATGACCGATACTTGCAAGATGAGCCAA
CCTCCCTTGTTCCGTTACCACCTTCATTTCCCTTCTCTTCTTTACTTTGGTAAATGATGA
TTAAGTGTATGTCGTGACATTGATTAACTGGAAATGTATCATTCGGATGTCCATTAACTG
CGTTGCCACCACTATTTTATTTTACACTCATGTTTGCTGCACGTACATCTGAATTGAACT
TCTTATTTTGGACTATGTACGTAGTAGTAGTACGTACGTGACAGCACCGAGACAGAAGGG
ACCGACCGAACCCCTCCAATAATCTTCACGTCCGCATTAGCTTGTGTTTAACCCGGGTCA
AAACAAACTTCCAAAGCAAGCTAGCATTTACGCCTCACCAAATTATCATGCACTCCGGCC
TGGCATTCAACCATCCCCAAATGTGTGACGCCTGGCCGGACGCGGCAGGGAGATTACAAA
CTGCAATGAACTGGAATTGATACAGGAGAGAGCCGCCCGATACGTGTCACTTGTGACGAT
GCACGTATGATCTCCTCCCCACCGTCTCACTCGCCTCCGGCCGCCTACAAAAGGACCCCC
CATCCTCCCCCACTGTCCCTGCATTGTGTGCTCTCACTCCCTAGCTATCCCCTTTCCATC
TTCTCCAAAACTTTTCCAAACGATCCGAAGAGGATGGGCTCAATCAAGAGGCAGGAGTAC
TCCTTCGACGACGATGACGACAATTTCTATGTCCAGGATGATGATGACCTTCTAGAGGCC
CCGACCCTCAGCAGCGAGCAAATGGCGCGCGCCAGGGTATGTATTAAACCTATGCTCAAT
TTCAATACTCAGCTATATATGGTTCTTGAATCGTGTCGACTTTCGCGCGCTTTTTTGAAA
TCACGGTTTCGCGCGCTTTTCTCCGTTTGAATGTTTTGTAGTAATTGTCTGCATTTTTGT
GTTATGATTGTAGTCATGGATCCATACAATTCTAGCAAAAGGAAATCATGAAGGTTACTC
TTTTCTTAATTTTGTAGGCAGGTTACAATTGGTTTCATGGATTCACACTTGGATCTTGTT
ATTTTGCTCGTATGTTCATAGATACTGCTTGCGTTATCTAGTTTGTGTTATCCAGTCTAG
CACTAATACATAGTATGCCTCATATATGGCGAAAATAGATCGGACATGAAGTTCTGAGTA
GGATTTTGAGATGCATATGCCTCACCGGAGAATTTTGATCCGCGATTCAAAGCTTCAATC
TGAATATATTAATTGAGTACTAACTAGAGCAGTTACATCAACTAAAAATATTAGGAATAC
ATCATATAGACGTAAACTACACGGAAAAGCCAGATGAATATTTTTTACGGGTAAAAGCCA
GATGATTTACCACTCACATATTTGGGGAGCAATTTTCTTACTACTACCGCCGCCGCACCT
GTATGAATTAACTCGCGGTCTCAATTTCCTGGTGCAATTACAACAGTTTGACTTGTTTCA
CTGCATGCAGGAGGAAGCTCTGTACGTGCTGAAAACCAAGTCCCCTGAAGAGGCTTTCAA
GATTTTCACCGAGGTAGAAGTAGTAGCACCGCTCATTTCTTTGTTCTACTTTAAATTACT
CCCATGTTATCTTAGCACCACTCTATCTAGTAGTACAAGTAAAAAGCATTCACAAATTAT
GTTCAAAAAATATATGTTGTAGGGTTCCTTTTACAAAATTGACGTGCCACTATTGGGACC
GGAGCAGGAGGGCAAGGCCCCGACCACCGCAACGCCTCCAACAGCCCCCTCCAACGGGAA
GGAGCATCCCCAGACCACTATGGCTCCGGCTAGGAAGTGAGTCAGCATGAGCAATCCGGT
CGCTTCAAGAAGTTATAGTAACTGCCCCCGTCGTAGTAGCGTCCTGCCCATCTGATCATG
CTGAACCATGAATAATTGTGTGTTTGTTTGTTTGTGAGCCTAAGAGGGACCTGTATTCCT
ATTTCGTGATCCATCGAATGAACCAACCATTTCGTTTAATGCTCTAGATTTTGTTCGTTT
AAATGCACGTCAACAACGAAACTGTATGTTTCTCATCTTCTGTCGTTGACGCGGTCTATT
CATCGAATGATGGAATATTTCATGAAAAAATAGGTAGTTTCCTAAATATTTCACATTTGA
AAGCTTGTGTATCAAAATTCAATCTTCAACCCACACTCTTCAATGACCGTGTCCATCAGG
TGATGGAGAGTCTGAAATAATCCGGTGTTCGAAAAGAAAAGCCACACTATCTAAAAACAA
GAAAAGACGCTAGCATTTCGCTCACCTCACGCTGCAGATAACCGAAAACGCAGTACCATC
ACCTATATATCCGAATGCAAAATACACACAACCCTCTTGCGTGTCCTTGCTCAAGTTCAT
GCTTAACAACGTGCCGTGACCGAGATTAACAAAAATATATCCGTAATTAATTTGCTTAAA
GCTAGCGATCGACGTTATGTCCACATATATTTTGTCGCAAATGCCGAAAGCGTTTTCCGT
TGTGAGCAGCGCACGCATCCGATGTTGTAGCCATGGCACCGTTTCATGCGTGCTGGGGTT
TTGCCTTTGCGTCCTCACCCTCTGGAAACGTACGTACATGCACGCAGGTGGGTCGCCGTG
TCACCTCACCTGATCCGCGCGTGAGCCTCGTGGCCGAGGCTGTGGCGTGTGCCGCGTCAC
TATGGCTTCCTCCCGCTTTCGGTTCTTGGCCGCTCGCGCACACTGGCTGCGCGGTGCCAA
ATCTGTGACAGCAATGCGGGTCGTCGCGTTCTGTGACCCGGAGTGTAGCGTAACGTGATC
CCCAGAGTCAACTTTTTGCCTACACAAGTTAGTTGGGCCCGTTCATTGCTTTTTAGCAAA
TACACGATGGCCTGGCCCAAACCTAACGCAACATGCACGCCTAATTTTTATTTATTTTTT
CTCGATGGGAATGGAGCCGACCGGATAAAGTTAGAAGTTAGAAGGAGAACTTGAGGAGCA
TGTCGTGCTTGTACACCTGGCCGGGCCTCACCGTCACCGACGGGAACTCGGGGTGGTTCA
CGGCGTCCGGATACGCCTGCGTCTCAAGGCAAAACCCGCCGTATTGCCGGTACACGACAC
CGCCCTTCCCTTTGGTGCCGTTCAGCCCGTTGCCGGTGTAGAGCTGCATGGCCGGCTGGT
TGGCCCAGAGCTGCAGCGCGCGCCCGGAGGCGCCGTCCCGGACCGCCGCCACCTTCCGCA
TGCCGTCCCCGTCGATCACGTAGTTGATGTCGT
