Contig Data
morexGenes
Links



Map Locations of contig_57197 (4971 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_57197

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69944 1 899 bp MLOC_69944.1 Available Available LOC_Os05g39960.3, FRAME:+3, EVALUE:5e-41, 13105.m04215 protein 40S ribosomal protein S26, putative, expressed





CDS Structure of MLOC_69944






Contig Sequence (4971 bp)

>contig_57197 4971 assembly3_WGSMorex_rbca.fasta
TATGTGCGATTTAAATAGACATACATTTTCACAAATAAATTGTCCAAGGTGAATTATTGC
CAATGTCTCTTCCCAAGAATCATGATGGACAAAGTGACAATTCAAAAGGAATGGATCCAA
CATCTTCTGAAGGTGGGAAAGAAGATCAAACTAATTATAATTAATTTCTTCAGCTTAACA
CAAGAACAAATTGGATCAATTTTTGATAAATCGAATAAGGACAGCTCTTATAATGCCATT
CTCACGAGATCCATTCACCAACGAACTCCTATATTTCTTTGAAGGGGGTACGTTTGAAAT
CACAGGCTCATCATGAATGGTGAACTAAAATATAAGGGCATGAAGACAAAACCACAAGGG
GGCAACCACAGACAAACCAAAAGGTTCTCTCTGATATAGATAGCAGCGAAATTGTCAAAA
TATAAAGACCTGATCACAAATTGTGCTTGACCAACCAACTTTCAGTACAACCGATTGCAG
CAAAAACTAGAATAGTTCAATATCCAGGGATGAGTAAAACTAGGGCTGGCACCATCACGG
AAGCATATTCCCAAACTAGATCAATGCACGGGGAGCAGGGGCGCCAGGAACAGCGCCAGC
GCCAGCAGGCGCACCACCAGGTCCACCAGGGCCTCCAGCACGGGGCGGGCCACCTTGTCC
AGGCCTAGGGCCGTCGTCCTGCAGGGCAAGTTACCAAAGGATAGAGAACATCAGTGAAAA
TTGCTTCAGACAGAACAAAAGAAAACATCGGCAGTCATGAACTATCACATCCACTAACAA
TCAGCTAGAAACAGAACGTCTTAGCAGATAAAGTGAAGGAGATGGTTATATAAATGTCCC
ATCCGTTAATGATCAGCTAAAAACAGAAGGTTTTAGCAGACAAAGTGAAGAGGATGGTTA
ATCAGATGTAAGGGACTGCTTCATCCCATAGGCAATTGTTATTGCAACTGGGGCAGACAA
GAAGTCCCACAATCTGATGAATTTTAGAGAATAATAACAAAGTAGATAAAACTACACAAG
AAAAAAATGTGTGTTGCTATCACATCATCAACTGATCAAAATGGAATGCATGCATTTCAG
AAATGAGTGCACTGAGGAGGTTATGACTGAATTAGAGATCAGTCATCACAGATAAGTCTG
CAATGCAGCAAGAACTGTTTATCTATGCTTCCGTTGACGCATCCATTGCGACATGTACAC
AGAGAATGCAACGCCAAAAGCAACACTAGAACAGTGATGAAATATTGCTTCACGAGTGCA
ATGAGGAAGTTATGACCAAATTAGGATCAGTCATCACACATAAGGCTGCAATGCACCAAG
GCATGTTTATTTATGCTTCCGTTGACGCATCCATTGTGACATGTGCACAGAGAATGCAAC
GCCAAAAGCAACAATAAAAGAGCGAAGACCTAACCATGGTGTACTACTCATTATGAACTT
CAAACTTCTATCTAACAGTTAAAATTGGAACAGCATACAAGAAAACCTCAAATCTTATTT
GCAAGCAGAGAGCATATAGGCTCTTAAAATCATACCCTGCGCCTGAAACGCTGCGGGGGC
TCACGGTTCCTCCTGTTCTCACGGGAGCGGACACGGACAATGTGAGCATGGATGGCACAA
GAAACACAGTGGTGCACCTTGGCATACAGCTTGGGGAGAACATATCCTGGACAAAAGATC
ATATATATGAGGTGTTTTCAGTATGCAGTCATTCGTGATGAATAAAAACTGGCATGTACA
AGTGTAACAATTAACAAGAGATATTGTACCATCATGCACACAAGCCTCCTGCACATCTCT
CACAGCAGCCTGCTCCACAATGTTCCTCACCAAGAAACGCTTGATAGCCTTGTCCTGTAC
AAAATAAGAAGTGCCTGTGAGATACCATCCCATCTATTATCTATGAATTCACTTCGGATA
TCAAACATATGCTACACGCATAATTTGACTACCATCAATTGTCAACTAAGAACAATTCGG
GAAATGAAAGCCTGAACCTACTGAGACTGATACATGTATAAACATAACTGCTCCGGTGAG
ATAAAACAACATCTAGCCAGCAACATCCCCAGCATCAAACATAACATCAACCGCAAACCG
CTAGAGCAACATACAGATCGCACCATGGAAACAGCACTAGCACAGATCTTCATGCTTGCA
CGGACTCCTCTACTACTAAGCCTACCCGATCTATCCCACTAGAATGGGACAGAAATGATG
GGGCTCATACCTTGGGGCAGCACTTGGCGCAGTTGGAGCAGCGGATGTACTTGACATGGC
CGCGGCCGTGCTTGTTGCGGCCGCCGTTCCTCCGCTTGAACGTCTGCGAAACACGGGAGA
GAACGGTGAGATGGGGGGCCGGAGGGGAGCGAGATCCGACGGAGGAGATCGGAGGACGGC
GGGGCTTACCATGGTCGCTTCGCGCCGCTGGGCGGGGGGTGGAGGCGCCCGGGAGGGGGA
GAGGAGGGAGGCGAGGCTCTAGCTAGGGTTTGCGGCGGCGGCGCGGCTTGGGAGGGATTG
AGGGAATGGTGCCAGCTTTAAGTAGGACGAACGCTGGGCTTTGTGGGCCGAGAAGCGGCT
CTCGGGTCATATGGGCCTGGATCGCGTCTCGCTTTTGGAACCCATGCCTGCATCTATGTG
TGTTCGTGTGGCCGGTGATCGTAAAGGAAAAGATTATCACTGGCCCATGGTTTTTTGTTT
TTCTATAACTACGCTTCTAGAGCCACGTAAAACAAAGCAAAAAAATGATTTTTTTTAGGA
AAGTCCTATTCTACTTCCGTGCTTAAGGGCATGTACAATGGTGCTATCTTAAGAGTGCCA
CGTAGGATAAATGATGAAGTGAAGGAGAGAGAACTTAAAAAAAAGGCTTTGTCTTCTCTT
ATTTAAGAGACACAAGAGGTGGTCTCTTAGCATAATATGTATCACCATATTTTTAGGAAT
AACTAATTATAGAAGATAAGGCTAAGAGATGACCATTGTAGACTTTCTTTTTTGTCATCT
TTAAATTACATGCAAAATTTAAGATAAAACTATCTTATCAACCATTGTACATGCCCTAAG
TGGGCTCGGGAATAACGATAAATTCGTTGATTTAGTTATTTTTGCCACGACTTCCACGAA
TGTGCTTTCATGATGAAATTTTGCAAGCATTTAAAAAAACTGTAAATGTTTTTCATAAGA
AAATGATTTTTTTTTATTTTTTCCAAATTAACGTTCATCCGAGCTCATTTGAGCTCGGCT
AAGAAACATTACGTCTTTTTTTAACATATTACGGACGCACACGTTCATAAATTAGCATAT
ACATTAACCTTATAAACGTGTGCACGCACATCCTATTTTTATGAGCATCTCTAAAAGATT
GGGCCGACACATCATCTTGAAATTGACAAATTCACTACGCACGTGTTCATAGTCGATGAA
AACATCTTCTTTGACTAAACAAACATCGTCGGAAAGACTGAAATAATAGAAAATAAAATG
CTAGTACCAATGTCAAATCTAGGGATTGAACCCTCATGGGCTGGTACCACCACAAAAGAT
CTAACCATACGAGCAAGCCCGGTTCACACACAAAAACTACACTTAAAATGTCTTTAGTGA
AGTCAAATTACCCGAGCACCTATATGTCATCCCTAAAAAAATCTTTAAATGAAATAAAAT
TAGGGATTTGAAAAAAGACAACCCCTTCCTCAAGGAAAACGTAAATAGATTTTGCTTCTC
GATATAACCCCTTGCAGTACGTTGTATTTTGTTGGATGAAACCTCCCAAACAATTTGCAA
ATGCCCATCGTCGGTATCCCTCCAGCCACACCGTATCTGCTATGATGGCTCTATATTTAC
GTATTCTTAGATCTCATTTGTTGCATATTATCTTCATATATCGTGTCTCACTGAACCAAG
TATATGTCTATTGTGCATGATTTTCGGTTTTCACTCTTTGTATTGTGAGCATTTCCTATT
TTGTATTTTGTTAGTTTTTCTAGTTTCCTTTGTTTTGTTGAGTCTACATGTTGTCTGGAG
TAACCTAGCACCAAGCACGGTGAAAAGGCAAGTAATGGGTTCGATATGGAGGACATACAG
GCAGAAGACTTAGGCATTTCGAAGTGTCAAAATTGGCTTTTTCACTCCCCACAAATCAAG
ATGTATACCGTAGGTGCATCGACATCATTCATATTATTCCAAGAACAATAACATCGAAAT
CCAAGTTTGTATGAAGAAATGACGCATGTTTTATTGGAGGAGTTTAGAGTGTTCGATGAT
GCATGGTACAACTCGCCAGGTCATATCGCAGATCGTACCACATCCGCAGACAGGCTCGGA
ATTACTCAGATCGGATGGGTTTTTTCATGGATTTCATCCATATTTGTTCCTACGTGATCC
TTTACTACTAAGGAAGGCTACATCTGTGGAGGGAGTCGATGAGTGTATTTGTTATGCTCA
TCACACCGTTGTCTAGATCAGGGGCGAACCCAAGAGGGGGCAAAGTGTTGAGAAATGTTG
CATGGGAAACAAAAAAATTCCTACGTTCACCAAGATCAATCTAGGAGATTAACATCGACG
AGAGGAGAGGTTGCGTCTACATACCCTTGTAGATCGCTAAGCGGAAGCGTTAAGGAACGC
GGTTGATGTAGTCGAACGTCTTTGAGATCCAATCACGATCTGTACCGTAAAATCCCGATT
AAGCGCCAAACGGACGGTAGCTCTGTGTTCAACACACGTATAACTTGATGACACCTTCAC
CTCCTAGATCTAGCGATCGATGGTGAAGTAGCAGCCCGAGTCCTCCGGTAGCACGACGTC
ATGGTGAGGTGGTGGTAGTGACAACTCAGCATGGCTTCATCGCGCGTTTTATAAATACAC
CCAAGTTTCAGGTGGCGTCAATTGTGAAACAATTCCANNNNNTCTTAGGTGATTGCCAAA
CTCATAACTCAAATATTCTCCTCCTTGATCAGATCGTAGGAATTTAATCTT