Contig Data
morexGenes
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Map Locations of contig_57190 (4733 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_57190

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69941 1 360 bp MLOC_69941.1 Available Available None
MLOC_69942 1 158 bp MLOC_69942.1 Available Available None
MLOC_69943 1 1557 bp MLOC_69943.1 Available Available None





CDS Structure of MLOC_69941






CDS Structure of MLOC_69942






CDS Structure of MLOC_69943






Contig Sequence (4733 bp)

>contig_57190 4733 assembly3_WGSMorex_rbca.fasta
TGAAGGAATGAGCTCGTATTGCCTTAGTGTATTCAATCCTTCTTGGGTGCTTATATACAG
TTACAGAGGGAGAGATAAGAGGCCATAACGGCCACGATGGGGATGGCCCTTCATGGGAAT
CGTGGCTAGTGGCATGCGATATGCATGGGTTGGTTGAGATCCAAGAGAGCCGGTCGTGCG
GTCAGCTAGGGGCCCAACGGGCATGCGACGTGTTCCAACATTAACTTCTTCCTTTCTCAA
ACCTTTCTCCACACTTCTTCAGAGCACGGTATAATCATCCAAATACTAAGTCCAGGGCTC
AGATTGGCTAAAAATTCAGAAATAAACATCGAGAATCCAACATTGTTATTTTCAAGAGGC
CTTGAGTATTTTCAAGATGAGTTCAACGTAAAAGGGTCAAGCCTTATTACTTTGTAAACT
GAGGGATTGATTGATGACTGACACCAGCCTCCAGGTACTTAGCGAGATATATATACATTA
TAATTTTTTCTGTGAGATATATATACATTATAATAGCTTGTTAGTTCAATTTTTTAATGA
GATAGTATTCCATTTTTTAGTTTCGCATAGGCTCTTGGATTTTGTCGACCCGGCCCAGTA
TGTTCATCCTTCTGCGAATGGTCATGGGCGCAGACCATGTCTTCACAAAATTTCCATGGG
TGAAACACATAGAATGCCATCGAATGTTTCTCTTTGTGTTGTTTGATCGATATACTTAAA
CTAATAAAATTTTGTTTTGTAACTTATACAATGTTCTCCTTCCCTGTCACTATACATGTT
GGATCACTGTCAGCTGTCACTAATTCACTATGTTGGATCACTGTCACCATACATTAAGTT
GTCGGCAGTTGCTACGAGAGTAGTTATTCAGGTAAAAAATAAGTGTATCTTTATAAAGCA
CATCATATTCTATATGTGAAGAATCTCTTTTTAGAAGAAAAAAACAGTTAATAGTTTACA
CCAAGTTTATGAAAAGAAAAGCTCATTTATGGTTGCCAGTTGAGAATCTTGCTTCACTTA
TTTTCCCGATATGCAAAATAATGGAAGATATTTTCCTCGATTTTAGAATGAGTAGCATTT
AGAACTTAGTGAAACATTCTAGGTATGTGGAGTGTGCACCCAACAAAACCATGATATAAA
TTAGTCGGCGTAGAGCAAGCTTGATGCTAGAGCAAGAGAGAAAATAAATTATGAATAGAT
AGAAAGCTTGGCTGCTATGTTTCGAAATAATTAGACGGGACCCCAAAGTACATATTAGCA
AGTCTTGGGCATGAGAGAGATAGGGAAGACTGAGGCTGCTGGCGTTGAAATGGGGACGTC
ACATGCACGTTTGCAATGGTGCAGTGAGCAGGATGAGCAGCGGTGTCCATGGTGGGAGGG
GACGGGCGAGGCGAGGAGCCGAGGAAGGTGGTGATAAGGTCGGCTGTAAAGCTACTTGTA
CCCCTAAGGCACATGAAGGGGCGGTACACGTTCGATGAAGGCCACGCGTAGACATACATA
GGTTGCAATAGGTACGATAGAACCATGGGTGGCGGATGAATGCTCGGCTCGGTGCCATTC
GGTTCGATGTATTTGTACGTAAGCAGGGGCGTGGGCGGGTGGACGGCTTTTTTTCTTAAG
ATAATCTTTCCCCTCCTAACGAAAGGTATTGGTTAATCCGAGCCCTCGATGTGTTTAGGG
GAGAGGGTGAAGCAGAAGTGTTTATACATACAGCCTCAATGAAAATGAAAAATGTCTACA
CTGGCATGAATGCATTGAGTATGTACAATTGAAAAAAAACTAATTTACACTTAGATCTTC
AAAGTTATTTCCCAAATTTTACAACTTCAACTGCATATCTTATTTAATTTTTCAGTTACA
CACTTAAGGTTATCTAATCAATGTAAGTTTTTAGACATATGTGGAGTACATAATCGGTTA
AGTTTTCACTAGGGATGCTAACACACACTGTATTTTGTGTCTGAAGGAAACAACTGGTCT
AGCAGTAAGATCAATTATTGAGTTTCTATGTACATACACTTTTGTAGACGCCTTTTGTTT
TGGTTTGTACCTACCTTGATAAAAAAAGGTTGTGTTGAAAATTATTTGTGTTGCAAAAAA
AGATCTTGGCAAAGAATGCCAATGTGGAATTGCTAAATCTATATAATAAGCTTTGTTGAG
AAACATGTTTCTTTGGTGGTGATATGGGAATTTCATGTCCTATCTACATTTCCCGTTAGT
GAAAGCCTATGATACAGACTTCTGAACTTGCATGGAAAGAGTTTCTAGATTGTCAAATTA
TGACTACTTCTTATACATTTTACAAATATAATATATTTTATTTCTTAATTGTCATGAAAA
AGTGGCTAGGACACACAAGTAAATTTTGTTAAAACTTGACCGCCATCTCTAGACAAGAGG
ACTCACATAATTATTACTCCTTTTAAGGTTTCTTTCCCACTACCACGAGTTAGTTTTCAT
TAACCTTTAAACTTACGTTGATGTGAACATTTTCCTCTTACAACAATCACTATGTTATTA
AGACATATCTGATTATTTTGGATATATATATATATATATGGATAGTGTAATACATATCAT
CATTTTCTTGGTCTAAAGAAGTTTTTAATCTTGAAAGACGGTGTTTAGAAAACTTCAAGA
CGAGTCTATAACTAGCGCAATGCGAAATCAGGATGACAAAACAGTTTGTTGGTGATAATT
CAACAAGGCTTGAAATTAGTTTCTTCGTCTTCTAATGTCAATGAAGTGGTTGTTGCATAC
ATGAAAAAGGTCCTAGCCAGGATAACGTAGTCTTAAATAGTATGAGTATTTGGTTCATAT
TACAATTTGTTCAACGAAAGTTATTGTCTAATCTGTATATGTTTAGATGTTCTTCTATAA
TGTCCCAAGCTTGCTGCAGAAGTATTCGATGGAAAGAGAGGTGCATTTATTCACGAAGAA
ATCAATCTTAGGTTACTGCTCCAACACTAGCCATGTGTGTTTCTAGCCACTCTTCTACTA
GCTCCGTTCCTAAATCTAAGTCTTTTTAGAGATTTCATTACGTACTAAATACGGAGCAAA
ATAAATGTATCTACACCCTAAAGTTATTTTCCGGATATGCAAAATAATGAAATATATTTT
TCCTGATTTTAGAATGAGTAGCATTTACTCGGTGAAAATTTGTACGTATGTGAAGTGTGC
ACCCGACCAAACCATGATATAAAGTCGGCGTAGAGCAACCTTGATGTGCTAGTGCAAGAG
AGAAAATAAATTATGAAGAGACACAAAGATTGGTTGCTATGTTTCGAAATAATTAGACGG
GACCCAAAATACATATTAGCAAGTCCTGGGCATGAGAGAGATCGGGAAGATTGAGGATGC
TTGCGTCGAAATAGTGACGGCATATGGACGTTTGGAGTGGCACAGTGAGCAGGATAAGCG
GCGGTGTCCACGATGGGAGTGGACGCGCGAGGTTAGGAGCGGAGGACGGTGGTAATAAGG
TCGGCTACAATGTTACTTGTACCCCTGGAGCTCAGGAAGGGGCGGTACGTGGTAGATGGA
CTCCACGCGTAGACATACGGAGGTTGCAATAGGCAGAGAATTCTACACTATGTCACTGAA
CATCTCCGCACAAATACAATAGAGCTGAGTCAGCTGGCTATAAGAAATAAACTAATATAT
TTTTGTTTAGTTAAAGAACAGAGAAGGTAAGCGGGCTCTTAGCTAAGAGTCAGCTCTAGC
ACGTGTTCCTAGGCATTTTGTGAGTATGAAAGGTGGGTCATATAATAAAAAAGTAGTACA
CATTTGCAATGAACTATTGTACATGTTGACTATAAGATGGGCTATAGATGACATGGCAAT
GACTTATAGCCAGCAGCTGGNTATACTATTGTACTTGCTCTAATATAGCCCAAATCCATC
AGAGAAAGTATACACGACGACTTTTCTCTGCTCATTACTGATTCTTGCTGTTGCTGGTAC
TTTTTTCTCTTGTCACTCTATTTAGGAGGGAAGAGGGAACGCGTGTCGTCAGGATATGAC
CCAAATTGAATTGCTACTACCACTTCAAGAAAAAAATAGCTATTGCCATACATCTTCCTT
TTAACTTCTTTCGCACACCTTTCGCCACACTTCTTCAGAGTACGGTATGGTGGGACAGCC
CAAGGACGAGGTATAGGCTCAGCTTCAAGATAGAAGAAGACTCACACAGGTACTCATTGG
TCACAAGAACACATAGAGGTTTCCGGCAAAACACTTCTACCGTTTTCTCTTTTGTTATTT
TTTACATCTGATTACAACGCGTACATAGCGTACGTACACACAGTCAAGCCCTCAACTGCC
TGATGTACGAGACCGTCAACTAGTCGGAAGAAACGGCGATTGGCTAGGAATCTCACGACT
CGGCCATCTCCTCATATCCTGGAGACCACGTCTGATCGTTAGCTTCACACCTAAGCCTAT
CCAACAACCAGCCTTATCCATGCAAGCATACGTGCACAACTCTAACTAACACTACTAGTT
TTGCATGTGTACATATGGTCACGTCCCTACATTTGCACACCACTATAGGAAAAAACTTAT
AAACCGAGTGTCCGAAACACTTGGCTTATACCTGAAAACACTCGGTAATTTTTTCCTGAT
TTTTTCTGGAATTTTTGGAAATATATATGCGAAAAACCTAGGGCAGAGGTGGCACAGGGA
GCTCACAAGCCTGGGAGGCGCGGGCCCCCTGGCCGCTGCTAGGGGGCTTGTGG