Contig Data
morexGenes
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Map Locations of contig_57068 (4116 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_57068

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69859 2 1092 bp AK251977.1 Available Available None





CDS Structure of MLOC_69859






Contig Sequence (4116 bp)

>contig_57068 4116 assembly3_WGSMorex_rbca.fasta
ATTTTGCTCCGTATGTGGTCTTTTAGTAAAATCTCTTAAAAGACTTATATTTCGGAACGG
AGGGAGTAGAAGCCACCATATTTTAGTTCATACCGCACAAAATTTGTAAAAATCCTGAAG
ATACGCTTTGTAGAGTGTGTTCCTCATGATCTCAATATTCATGTCATCCAGATCCTACAC
AATAAACATGAAGCTCGAATAACATACCAAGGTATACTTAACCGTTTTAACAAAAATGAA
CAGCACAATGGTTGCAAAGTTTTTACCTCAGATGTAATGCACTCTGAGAAGTACGGTGCT
AAGGGTGTATCAACTAGAACCAGCCTGTAAAGCTCACGCATATTTTGAGCAACTGCAAGC
GATGCAATGCTGTTGATTGACGGGAAAAAAATGAAGAGTCAGTATTTGATAGATATCCAT
TTAACAGAAACGAGAAAGGAACCACAAGAATACCTATCAAACATGCCCAATGGATGGCAT
TTCTCCAACAGTTCATTGACATCTCTTTCATGCAATGTCCCAGTAACAATAAGGACAACA
TTATCGATCATGTGTCCATACCTGTGGAAAACATTATCCCGTTAGGATCAAACTGAACTC
CACCCTGCAGTGGTTTGATATGTTGTTGGCTTGTGCAAACGAAGCAGAAACAAATGGCAT
CCTAGCGGTGCTCCATTACTTACGTTATGTATTGTAGGAATGTAGATAGAGGTTCATTCG
CCTGGCACAACATGTGTTTGTATTCATCAACCAACTTAAGAGTGCACTTCTCGACGATTG
TTGTTGTGTGCAAGGGAGAAGGTTCTGCAATTAATCAAAAATAAGATGACAATAAAGAGG
TATCGAAAGAAACGCGTAGAACAAGCATACACAGCAAATATATCATAGCACAACAGCACA
TTGATGGAAGGGCATTTAGCACCACATGGCGGGTGTGACGTAACAGATGAGAAAAAAAAT
AGACTAATCTTCTTCAGGAAGAAATATGATGTAATAAATTGAGTGAAGTCGTCTTGGAAC
ACATGACAGATAGCTGAAAAAGTAAGGTGGGAGTGGAGGAATGAGGATTGTAGTCCAGGG
GGGTCAGGCTGATGCTACAGATTTGCGATGACATGTGGGCTGTGGGAAATATAACCAACT
TGCAGGCACTGCGTAGATTAACACTGCCCGTTTGGTTGCTCATCAAACCTGTTCCCAACG
ATTCCCAGAGAGCAGGCCTAGCTTAAGAGCTTCCCTCATGAGATCCCAACTCGAGAAGGA
AGAGCCGAGCACGGTGCAGTCTTATTATCCCTAACTAAATCTCTAATTGGCTAATCGAGA
TCGCAATTCGCATGGACGGGATCAGGAATCGGGAACCTTACCCAATCCAATCCAACTCAA
AGAAGACAAGGAAAAGATCCGAGCTAGGTGAGAGAGAGGAATCAGGCCATACCGTTCTGG
AGGTATGGACCGTACTCGGTGGCGGAGAGGTGCATCTTGATGTCGTCGAGGGTCTCGCAC
TGGCAGAGGTTGTTGTAATCGGCTTGGGTGAGGAGTCCCGAGCGGTTCCCCCGCACGATC
GCCTCCAGGAACCCATCGTGGATGTTGAACGACAGCATCTCCCACGAGTACATCTTGGTT
CTCACCGGAGGAAGGATCTCGGCCGAGGCGAGGGGGATCGGGAGGCAGCTAGCTGCAGAT
CCGGGAGGGAGTTCGCGCTTGCGGATGCGGTGGAGATTTTTATCTGTCAGCCAGAATTCG
TCTTCACAAGGCAAGGTCGTGCCGGGCTCAGCGTACCTCTCAGATCCGGCTAGGCACGTC
GCCACGCCTGTGCCCTGTGGCTGTGGTTTCTTTTGTTTTTCAGAGGAAGACAATGCCAAC
CCGGAGACAAAATTTTAGGACGCCTTTGCTAAAGTGCATTAGCCCAGCCAGGCCTACGCA
ATAATTCTACACCTACGTGAACTTACGAAAGTTCTACGTAAATCCTTCTCGCTAATTATA
AATTGTCCCTTAATTTAAGAGGGGTGAAGTCTCAAAACAACCCTATCTTCTTGTCGGATT
CAAACCTTCACCTTCTAATCCATGGAATCTGCACCCCCACCTTTCAAATCCCGGTTGTAA
TGGCCCTTCAGCTCGTTCCCAAACAAGGGATTGCGGATGTGGCGCTCGGAGAGACCGGGA
TCGCTGAATATGTGCGCTGGAGAAAACTGGTTGAGCCAGACCAGCTTTGTTCGCCTCCCC
TCGCTCTGTTCCCTGCGGCTGGACGCATGAACTTCTCCGCGGCGTCCATGGCTAACGACG
ACTGATCCCGGCTGCTCTCCGACAAGAACTACGGCAGAGCAGAATCAGGTACGCGATAAT
GCATCCGTTCTGAGCATTTGGTGTTTTCCCCCTCTGTATGGATGCTAGGTTTAGGGTTCT
ACAGTGAGGGGAAGTTGGGGTTTTTGTGGGTGGGCATTTGTTGGGGTTTTGATTATCACT
GTTGCATCAGTAACTTTGATTATCATGTAGGTGTTTGTCGTTCAAATCATGGACCCGGCA
GAGATCTTGAATGTCAGATTCCACTTTGGGGGGAAGTTCATCAAGATTGGTCCAAGTCTT
GACTATGTGGGAGGAGATTCTGGATTGTCAGAGATCGAGTGTGACAAGCTCTCTTTACAG
GAGGTGAAAGGGTTTTTAAGAGATCGTATGGCAGTGAAGGAGAGCATGAAGTGCTATTTC
TTGTTGCCTGGCAGAGATTTGGCAGATGGATTGATCTTTTTACATGATGATGTTGGCTGC
ATCAAAATGTCTGACTATATTACAGATGGAGGAGTTGCTGACATATATGTGGAGTATAAA
GGTGAAGAAGATGAAAAGGAAGAAACAGACAATGGTTCAGATTTTGAAGATGAGCTAGAT
GAAGTGATGAACTTGGGCAGTGAAGAAGAACCTGATGCAGTTATCACAACAGAAGAACCT
GATGCATTTATCACAACACAAGAACTTGCTGTAATTATCACATCACAAGAACCTGGTCAT
ATTCTGAATGCCATTGAACAGAGTGGTGCTGCTGGATAAATTCTTGAGCATATACTTGTT
CCTGATGTAGGTGGTGTGATCACTCAAGAGATACTACTGAAGGGGGCACAAGATACTGCT
AAAGTGCCGCAAAATGGTTCAGATTCAGAGGAATCAGAGGACTATGAGTATGTTCCACAT
AGTGATGATAGTGGGGAAGAATCAGAGGTTGTTGAGATGAGAAAACATGCAAGAAAATTC
AGGAAAAAGATGAGAGATTCCAAGATGTGGGCTGATACAAATGCAACACGGGCAGTGCCC
ATTGATTTGGTAGCAAATGTGGAGGAAGTTGTGGAGGACATGGAATTTGAGTCATCAGAC
GAAGACTACTCCTATGATGAGGATGAAGATGGCAACATAGGTAGGAGGAAGAGCCAGTTT
GTGAGGTTTAACTCAAGATCTGACATTCCTCATTTTAGTCTTGGAATGGTTTTCAAAAGC
AAGAAACAGTTGACTAGAGCTATCAAGAGATATGGGCTTGCTACCAAAAGAAGCATTTCA
TTCTTGAAGTCAGAGGAGGTCAGAGTTAGAGCAAAATGTGATTGGCCTGGGTGTCCCTGG
ATGTTATATGCAGCTAAGACCAGTAGGTGTTCTAGGTTTCAAATCATCACATTTGAAGAT
GAACACCAATGTGCACAAAACAGAGACAACAGACTGGTTACTGCTAAGGTCATTGCCAAA
AGGTATGAGCACTTCATCCTGGCAAATCCTTTGTGGAAGATTGATAGTATGAATTCCACA
ATGATGAAAGACATGTTTGCTGATGTGTCCATTTCAAAGTGCAAGGCTGCAAAAAAACTT
GTACTTGACAAGCTGATGAGTGGTATGCAAAGTGAGTACAGCAGGGTGTTTGATTATCAG
TTGGAATTTCTTAGGAGCAATACTGGGAGTGTTGTGGCTATTTGCTTGGATCCAAAAGAG
ATGGAGAAAAATATTTTTCAACAATTCTATGTATGTTTCAATGCTATGAAGCAAGGGTTT
AAAGCTGGTTGTAGGAAAGTGATTGGACTAGATGGTTGTGTTGGAAATATGCCATAGAGG
CAATAATAAGATGGTTATTATCATATTTCCTCGTTC