Contig Data
morexGenes
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Map Locations of contig_56964 (5148 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_56964

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69795 2 2623 bp MLOC_69795.1 Available Available LOC_Os09g25625.1, FRAME:+2, EVALUE:0.0, 13109.m18569 protein S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed
MLOC_69794 1 778 bp MLOC_69794.1 Available Available None





CDS Structure of MLOC_69795






CDS Structure of MLOC_69794






Contig Sequence (5148 bp)

>contig_56964 5148 assembly3_WGSMorex_rbca.fasta
ATTAGGCGACTAAGTTCATGGGTTTCGGTGATTTGCTGTGCTGGATTATGCGATTTAAAT
GTTTGCTTTTTTTAGGCGACTCGATGAGAAATTGAAGGCGATTAAGCGCTGGTTTTGGCC
GACTAGATGGGACTAGTGAGGTGAGTTAGTATATGGAGGGTGGACGACTAGGAGTGCGGT
GGAGTAGGCGACTAAGTTCATGGGTTCCGGTGACTTGGTGTACAGGATTAGGCGGTTTAA
TTCTTTGCTTTTTTGTCCGTCTCGATGAGAAATAGGAGGCTATTAAGCACATAGGTGTTT
GTTCCCCCATCCTCCGGGCAACTAAGTGCCCTGGTTTTGGGCCAACTAGATTGAACTAGT
GAGGTGAGTTAGGGCCAGTTTGGTTTGTGACTTCGTCCTCATGCCTGGAAGTTCAGCCCT
GCTAGGTCTGGACTTCTAAGTTGGATTTTTCCTGCTTGGCCAAGCCAATATGGCGATGAT
GCATCTGGTTTGGTTCATGGCCTAGTAGAGCATCAACATTACATCTAATGAGGCTATTGT
TTATTCAAACATCCCATCCAGGTTGCTCTTAGGTCGTGGCAGCACGCCCTGACGCCCGAA
TCCAGTGACCTGGCTCAGGTAATTACAATGACCAGCCCAGGCTAATCACAACACAAGGAG
TCCCGGGCCAGACAAGCTCACTTTTGCACAGGGCATCAACCAAACAACCATACTTCAAAC
CCAGGCACAACTCTAGAGCAGGCAAGAGATGATGAGTATGCAAACCAAACATGCCCTTAG
TATATGGATGGTGAGCAACTTTGAGTGTGGTGGAGTAGGCGACTAAGTTCATGGTTCTGG
CTACTTAGTGTATGGATTTTTTGGGATGTGAAATGTGAGGCGATTAAGCACATAGAAGGG
TCCCATCCGACGTGAAATGTGACTTGATGTTTACTATGTGTGTGTGTGAGCATGTGAGAA
AAAAACATATTTTCCTTACTGTCAACAATTGTATAGACTCGAAAAATAAAAAGAATAAAA
AAAGTGAAAATGAAAAAAAATATGGGATGGGGGTGCCCTTGCCCTTATACTGTGACCAGG
GGTGTACTACTGTACTTTTTGACATTGCAAAAAATCTTCTGTGTCAGTGAGCTAGAAATT
CAGTTATTTTTCTAGACTAAAAGTCATCCTATCACATTTTCAATTGATTCAATGTCGTTT
CTAAAAGTGTAAACACAAACTTTGGTCACTTGTGGATTCCTCGAGCTTCAGGATTACTGT
GGGATATGAGCGCAGAAACTTTGGTGAGTTCATCTAGGAAAATTAAGGAAAAAACGTATG
TCCATAGATCATTGTGAACTTGCCGAAAATCTGGGCGCAGATAACCCCCTACCTTATTTG
CATTTTCTCCAGTGACGCAGACCCAGCGAAAACGTGCAACCCCAATGGTTCACGAGGCTC
ACAAAGTCAAGTGACGAGTCTTTTGGAAGTTCTACAGCGAGAGAACAAAATCTGATTGAA
CACTGAATATTCAGTACACTGTGGATGGCAAATATGCAGCACAAGGCAAAATAAGAAGCC
TGGTCATGTCATGACAGTGGATCATACAGTAGAAGACAGACGGAAAACTTGCCCATCAAA
CATAACTCGCAACTTTATTGTAAGTTGACAAGATTAACGGATAACTCCAACATTGGTTTG
AACACAGTCGAGTTACAATATCATTCTCCCCACAAGAGCATCGGCGACAGAAACAAATAT
ACTTCGCTCATTATGGCAGACGCAGCAGACCATCTAGAGCACTTATTCAGCAGAAACAAT
AGATAAAAACAAACAGTAGACAAGATACGCTTTGCCGGTCACCCGGCCAGCTGCTTAACC
GATACTACCATAGCAGAATACCATCTCAGAGACTTCAGACGTCTCTGGATTTCTCTCAGG
CAGCGACGACATCTTTCCCGGCAGACTTCTTCTTCACTCCCCAGACGCACGCCTCCTCGC
CCTGCACGGCCGTCTCCATCCCGTCGCTGCTCCAGCCATCGTCCAAGGTCGACCTCGGCG
ACACGGCGCCAGGGGCAACCGCGCTGAAGCTCTGGTACATGAGCAGGCCACCGCCTGGAA
GCTCCTGCTGGACGACATCATCGCATAGGTAGGAGGAGCCAACCTCCGCACTGGTCGCCC
ATGATTTGGCGAAGCCGTGGCCACCGAAGATGGTGACGGCGACTGAGAAGTCTGACGGAC
GGAAGCATGACAGCACCCTCTTGATCAGGTCACTGTAAACCAGGGAGCCAGGGTTGAAGT
TCATGGCTTCATAGCTGGCGTAGCTGAAGCCCTCCTCTGGAGTGACGTGGATCGTGGAGG
CTGCAGGGCCACAGACGCCGTTCATCGAGTACCCGCACGGGTCGAAGTCGAAGTCGCAGA
TCTCCATCTCGGGGATGATAGCAGAGATCCCCGAGACCTTGGTCATCTCCTTGGCCGAGG
AGCAGCCGCCGTCGGCAGAGTTCTTGAAGAACACCGCAGCCTTCCTTGCGTCCAGCCCAG
TCATGCACATCTCGAGCGTGACCATGGGTTGCTCAGGCTCCTCCGTGGCATAGTAGACGT
GCCACATCTTCTTGGGCGTGAACGCATCACCCATCACGTACGCATTGCCACCAGACTTGA
GGCCACCAAAGAAGTCGTTCAGGACGGATGCCTCCTCCGAGAAGCTGCGGTGAGGCGCGG
GCTGCGCGCCAGGGAAGATAAACGTCCCGCGGGAGTACTTCGCAGAAAGAAGAGGCAGCG
ACAGCTCCGCAGCAAGCTCGAGGATGCGAGGAATCGACAGCAGAAGCTTTGTGGTTCCAC
AGGTTTTGATGACAACCTTGTGGGAGTACACAAAGAGACTCGACTCCGAGAGCACATAAG
AGTCGAACTGCTTGTTCGAGAGCTGGGACACAATGGTGCACCGTGCAAGATCGAGGAAGG
AGTCGATCTGCTGGCGAGAGAGGGCGCGAAGGCCACGGCCACAGGGGTCCGCAAAGACAG
GCGCGTCGGAGAAAGTTATCTCAAGGCGCTTCTCGTAGCCCTCAAACCCAATAGGGGAGG
CAGGGGCAGAGCCCCAGCAGTCAGCCAAAGACATTTCCATCTGATCAAGTGTTGCGAGGA
AGAAGAGAGGATGACAGAGGACAGAGGAGATCGGAGATAACAACCGGAGTAGCAGAGGAA
GCAGCCAGCCAAGGGAGGATTATTGGGAAATAAAAGGAAAGGGAAATTGCAGTAATAAAA
ATCCTATGCTACGTCGAAAGGCATGCGAAGGGAATATCAGGAGGGCTTGCGGGCGCACTG
CAAAACAAAGATCAGAGTGTAATTGTTAGAAACAAGAGTATGAAATGCATCAACGAGCAT
ATTCAAATTTACATCTATATATGTAACTATTAATTGGTTAACTCTTGTGGTGCTTACGTT
GGAGTAGGCAGCAGACTGGAACTTCTTGATTCCTCCGGCCGGGCGAACGTCCTCAATCTT
GTAACCGAGGGGAGCTTCGTACATGGAATTACTACTACTAGACTTCGTTCCGGCTTTTGA
CATCATTTAGAACATTCACAATCGTTCCTTTGTGCTGATGATGAGAGAAGAAAAGAAAAG
AAAAAAAGTTAGTGTCTCAAGTAATATGGCAGTAACATGGCACTATCAAGATCTGAAACT
CATATTGAGCTGATGAGCATAATTCATATGGTCTTGACATCTGAACCACTTGAGCTGATG
AGCATACTTTTAGATGGTTAAAGCAATACGATTAGGCAATCATGAACCACTTGAATTAGA
CACAACTGCATATTCCTTAGGGTTAAACCTAGAATCAATCCCATAATATTTTTAGAAAAT
ATATAGCTTACCAATTAACTAGTACAAAAATGAATCAACAATGTAATTTAGGCACAGAGA
AGCAGTAGTATGCGATATGTCAACCAATAATAGATACTAAGGACAAAATAATTGTTGCGT
TTTTTATCTCCAGGTTTTCCTCCAGGAAAAAATTGCTTCTAAATGCGTAATTAAAAGACA
TAAATACAAAAATCAATGCAAACCAAAGCCTGCTCGGTGAACATAATTGCGGATTGCGGA
AAAGTAGTAGTATTAAAAAAACCAGACGTTCCCCATGACATACGCTTCGTTTTGCAGGCT
GGGAAGGTTTGACTATGATAAACAAAGACAACGCAGCAGGCAAAAACGAGCATGAAAGAA
AGACTATAGATCCACGTTTCAGACATAAAAATTTACTAAACAACAACAACAATGGGCGCA
GAAGCGGCGTTCCCGCGAGAAGCCCTAGCACACGATCAAACGGACCGAAAGACTCTCATC
TCTCCCTAAACTAAAATAGTACTCGCATCATGCAGAACAGGGGAGGACGAGGCCCAAGAA
ATCCCCTGCCCGAGGAGCAGAGCCGGCTGATCCCCCGCCACCAGACAACGGACCCCGGAG
AACATAAATCGGGATCGAGCACAAAACATTGCGGCGCACTACAAACGGGATCGTAGAGCG
ATAAGGAGGGGGCGTGCGGAGAAGGCAGGGAACTCACGATTCTTCGACGGCTCGAGGAGG
AGGAACAGGGTCAGATCGACGGAATTTGTACTAGGTTACGGGGCACGGGCGGGCGGGCGG
TTGGTTTGCGCTTTCGAGGCGATCGGCTCGAAAAGGTTTTATTTCCGATGGGGAAGGCGT
GTGGAGGCTGGCGCGGCCACCGGCGCTATTTATAGTGGCCGGCCGAGGGGGGTACGGAGA
GGCGGTGCGAAGCGGCTACAAGGTTTTTTTAAGGCCTCGGTTCCGGGCTTCCGGGCCTAT
TCCGGTCCCATATTTTTGGGTGAGAACTTGGAAACTCACGTGCAAAATCTCCTGGCCGAC
CTGTCATGAGACATGAGTTAACAAACATCGTCGTCTCAACTTTTTCTTTAAGCTCAACCC
TTGAATAGAACACAAGTATGCCCTTTCTTTTGTGTGTGGGGTTTGGGGGAGGGGTACTAA
ACGTAAAAAAGATACGTCACCTAGAGAGCCATCAAATATAACACAATCGATTAGTCAGAT
CAAGGACGGAGCTAGGTTGAACCCATGGAGGGGGCAAAGCCTTTATGTTTTAGGAATTTT
TGACTGAAACAACTACTAGCATTGAAGAAGAATCAATTCATTGAGGGG