Map Locations of contig_56855 (9428 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_56855

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69711 1 1069 bp None Available Available None
MLOC_69710 1 1677 bp AK376953 Available Available None
MLOC_69709 1 576 bp MLOC_69709.1 Available Available None





CDS Structure of MLOC_69711






CDS Structure of MLOC_69710






CDS Structure of MLOC_69709






Contig Sequence (9428 bp)

>contig_56855 9428 assembly3_WGSMorex_rbca.fasta
CGGCCGCGGCGTGGTGTGTAGGACGCGCGGAGGTTTCTACGGCGGCGCGGTGCGGCGGTT
TTTTGGGCGGCGGAGCGGCCACACGGACGCCGGACGATTCGGGGACGGCATTCGGCGGCG
CGGCGGGGGTTGTTTTCCCCTACGGCGCGGCATCCGATCGGAGCGGAAGCGGCCTTTTCA
TGTGGGCTTCTTTGCAGTTTCATTGGGCCTAGGAGAAATAGCTGGGCTTCCCTTAACTCC
CTCGTGGGCCTTGGAACCCTTCCTCACACTTCGCCAGTTCTCACCTCTCCTCTTCCCTTC
TCCTCTCGCGGACGGCTGATCCAGCGGCGGCGGCGGCGGCGGCGCTACGCTGCGGTAGGC
ATCGAGCTCGGCGGCGGCGGCGGCATCATGGCGCTGCGGATGGCGGCGGCCGCGTTCGTG
CGGCGCCTGGTGCCGGCGCGCCCCCCATCGCTCCTGGCGGAGGCGGAGGCCGTGACGTGC
GGGCGCGGGGACAAGAAGACCAAGCGCGGGAAGCGGTTCAAGGGCTCCTACGGCAACTCG
CGGCCGAAGCGGGACAAGAAGATCGAGCGCATCAAGGACCGCGTCGAGGTGCCCCGCTCC
ACCCCGTGGCCCCTCCCCTTCAAGCTCATCTGAGCTCAGGGACCACCCCCCCTCTTCGGT
TCGTCGGGCTACCTAGGGTCTCACTTTATCCCCTATCGATTACTGCCACTCTCAGCTGCT
TTACTTAGTTTGTTTCCCAAATTAGGCTGTGTGTACCATCGGATCGAATTGCCATGTTGC
AACAATTTCGGACAGTGCAGTCGCTCTGGATGAAATGGATTGTTTTATGTGCCCTCTTGT
CATCGTGTTATCTGGATGATGATTATAATAAATCATTGCAAATGAGATTCTATAGTTACG
GATTTATACGGTTAACAATAGCTTTGATGTTCTTTTTGTGCGATTGTTGATGAGCACCCA
TTTCTTTGATTGTTTTTTATGCATGGAAAATACCCAAGTTTTGACTGCTTTAACTGAATC
TTCACAAGTAAGTTTTGTTCTTATTATTGTCAATGTATCATACTATGTCATGGTTGAACT
AGCATTTCTTTGCATTGATTGCTGTTCATGACTGGATGCCATTAGAGTAGAATTTGGGAC
TAGAATTCACAGCTTTATATTCTTCCTGCGCTCCTTATAGCTTACTGATGACTTAAAACT
TATCGTGTATTGACTTTATGATGGCTGGATTTTGCAACATCAAAATTTTGCTGAATGTTG
TTTGGACATTATTATGCTCGAACACAATAGCCTTATTTCTATTTGCAAGATGTTGACTGA
TTACTCTGATTTTCTTGTTGTGATGCTGAAGACGCATTCCTATTGCCATTAGTATCGCCA
TCTTGACTATTTGAAAACAGTAATAGCTGAAAACTATTTTATTGCATGTCCAGTTTTCAT
GTCATGGATTGAAGGTACAGTGTCGTTGGCAACTTGCCATTGACGTTATTGCTTTGACCA
TCCAAATTACTTGAATCACTCAGCCGTTATAGAGTTTTAAAATTGCATGCCTCGGTTGCA
TATATCTGCTTAAAGCTAAGCCACTGCTGTTATTGTTACAACATGAACAAATTATTCATA
ATGTTATGTGTTTTCTGCCATTGATTCTCTGGTTACATGTTTGGTGATCTTTGAATAATC
AGTAGCCAGAACACATCTTAATGTCGCCCACAACGGTGTCCTTTTCTCTCCTTGTTTTAT
AATTCTGGTTTCTGATGTAAACTAGTGTTTCGCAGACATGAACACATTACAGTTCTCTAT
ACGCAACAATTATTGGAAAATCTTATCCACATAAGGACATATCCGCAAGCATAATGCGGA
ACTGGCATAGATATACAAGTAGGTTACGAAGAGAGTTAATTGTCCTTTTCAATATCAATT
CCAAATGTCAATGATAATAACATCCTTTTCTTGTCTCAAGTGGTAACACGATCAAGTTAC
TGCATGATATGGCTTTAAATTATTTTCCAAAGTTAAATTTGTGATATAAAATCTGTTTGG
GGGTATATATACTTTGTTGTCTTTGTCACTAGGTCGCATAAACCTTAGCTGATTTTTTTG
ATTTAAATTGTCTGAGATATACATTTTGCCACCGGGTCAAATGGACCGTAGATCAGACTA
ATGCTCGATTGACAGCGAGAGCAGTTGGTATTATTATTTTGCGTCTGTTCTACCTTGGGG
CAGTAGTCCACCTTTATATACTAAACTCTGGAAGAGAAGAACCTTAATACTGAACCAAGT
TTCGAGCTGGAAGAGAAGAACCTTGATACTGAATCAAGTTTCGGGGACTTCCTGGTGACT
TGATTGGTTCCCTTCTCCTAATTTTCACAGGATTATTCCCATCCAATGATATGAGACTGA
CCTGAAAAATGATAATCAACTAGTAATTTGGATTTCTTGAGAGTTGAATTCGATGCCGTA
GCCATTTATGATGGTGCAGTGGCGATCAGGACGACGACGACAAATTGTCATGAGGGTGCT
GGAGCCGTCTGGACGTTTGTTGATGATGGTATGGGCACTTGTGCAGTTTTATTCGTAATA
AAGTTTGCTATTTATACTGTACAGAAAGCATAATTTCTATATACATGTCGATCCCTTACA
TACTTCTTTGTAAGTTTCGGTACTTCCTATTGCTGGATGTGGTGCTTCTTTTGTTTCCCT
TTGGGCTTTGGCATGCATGCGGCCGCTCCATCTCCATGCCCCCTCTGCTTTTGGTCCGCT
CAAGTTGCAGTCAGGTGATGGATCGTGGATCAGTGAGCAGTGCCTGACCACGACAAGTGA
GCGACCACACAGATTTGGTGCGAGCGGCCAGGTTCTCCGTTCCTCCTTCCGTTAACCGTC
TCCAGCACCATTTCTCGGAGCGACGGGCTAGCAACCCGTGCGATGCTTGGACAGGCAGGC
TGACAGTAACACGCCGGCTGACGCTCGAGCTCGACCCTTCAATACTACTGGAGTGCTGTA
ATCCGAGGTGAAGGTATCATCTTCATCAGTCACCCGAGAGTGCCTGCCTGCTCCGTGATA
CAGTACTGTCGTCTGGAGGTCTCTGAGAGCTCCGTTGATCTTGATCCCGATGTCCTGGTC
GACCCTGTAGGTACCTCTGGCTGGGTGATGTGAGCCCGTGCTGGCTGGGTGGCTCTGTTG
ATGCTTCATTCCGGAGCTTGTCCTGGTCGGATAAACCACCCCCGCTCCTGGGTCCTGTCT
GGTAGGATCGATCAGGACGAGTAACAGTGTCGCTGCTGCTCTCTCACCATCGACGAGCCC
GGTGTCTCCAATAAAATTGGAAAATCAGACCATGTTTTACCGAGAGCTTAGCAAAACGAC
GACGCTGATCGCAACCCCACGCACGGTGGTGTCCACTCTCCAGAGCCTCCGCCGGTGGTG
GGCGCCACGGCACGAGCGTCGCCGGAGGGCGGTACATGCGGTGGCGGTGGCGGTGGCGGT
GGCGTGACCTCGCACGCAACTGCAGACGACACTGTTCACAGATCCCTCGGCCCGGCGAGA
TATATATACTCGTAAGATAAGCAGCAGGCAGGCAGGCAGGCACTGTAGCTGCGGCATGGC
GCGGCGTGCGTGCGTGCCCGGTCGGCCGGCCAACGGCGGGTGGCGGATGGCGATGGCCAA
TAGGGGGGAGAAAGGTGGCGGGCTGGATCTCTTCACCGGACTCAGACCTGGATGGATAAA
CCTAAAAGAGGGGAGGATTAAAAGGCCAGCGAGAGGCCGCCAAATCCAGACACTGCTGGA
CCCCGTGCGGATTCCGGCCGCACTCCGTGGCGCTGGCCGCCTCCTCGCCTCTCGTTCTGT
CCATCGTTCGTTCCCCTCCCGTGCCGTTGCCGTTGCCGCTGCCAGGGGACGACGGATCCG
TCGGTGTACCGCGCGCGTACACGTACTACCTAATCTGGCCCCTGTCCAACAGTTCGCGCG
ACGTCGACGCATGATCGCGTACAGTCGTCGTGTTTCTCCTCTCATGAAAAAGCTTTTCGA
GATTCGGTCCAGTCGGAAGATGGAAAAAAGGGCTTGGATCCGGTTCCTGCCTATCCCAGC
ACACCACCCGTTCCTTGTCTCACTTTCACCTCGGCGAAAGAAGAAGAAAAAAACTGCTTC
TGCTGTTTGCTCCAGATCAGACTGCAGATCTTCAGGTTCAAGCTAATTGATAGAGGTGAG
AGGGGGTGGCACTCCAGTCCAACACACCATCTTTTAGCATGATATTTCACGCAGCGGTCG
TGAGAAGGAAGGGCAAGAACTTATCCGCCGGTCAACGATGATAAGCATGCTCGGAAGTAA
CTTGGCGAGACACGGAAACCCGGAGGGGTACGTGTGCTGTGCCGTGCTGTGCTGTGCTGT
GAGAGGGAACGGATAAGTGACGAGACAGTAACCGGAAAGGAATCAGGACGAGCAAGGAGG
GGAACAGCCGGATGGTTGGAGTGGAGTTAGTTTAGTTTTAGTTCTCAATCGGATCGGGTC
AGTGGGTGGACCTTGAAAGCGTCTGTCAAACTTTGCTGCGGTGCGATCACACGCACCCAA
ACAGAACTCGCCAGCGGCGCCGGGAAAGCGGAAGGGCGGGGACACCTGGATTGCATGTGC
GAGGCCGTGGGAGTCCTCTTACAAAACTGATGATGAAACCGTGGAAAGTGTCACCTTTTC
TCCGTCGCGTCTATCCGCTCCATATTATATATATATATATATATGTTCTCCCCGTTCAGT
ACGTCAACCGGACGTACTGTCGTGTGTAGTACAGCACGTACAAGGTCGCATGCTGCACGT
TGCATGAGTACCCCCTCCATTCCACATGTGAAACGGAGGAAGTACATTAGCGAGGGAACT
ACAGATGTAGAAAATACGATTAAAGCATTTCTAACCCATCACCAATAATTTACAGGAGAA
TACATCCGAGTATTCATTAAAGGAGCATACTAAAACAAAGCCATTTCTAACCAATCCTTA
ATACTTTTATAACTCCCTAAAAAAACACAAATGCGGTGGAAATTTGATTCAAACTATTAC
GTCGAACCTGATTCGAAATATTTCACGTATCTTGAACAAAGTTTAGACTAGTTTGTATAG
AAATTTACTAAAACTACTTGCTAACCCCTCTCTTTCTAGACCCTCTCCTTGTTTGATTCG
ATAAGAGACCGTCATCGTCGGAGTCGAAGTTGTTGCAGCAAAGGTCAATGACCTTTTTTG
CCCCGACCACATACTGCCTGCACAACAGACGCTCTACCTCAATGTCCTTTGGGTATCAAG
GGCGGAGCTCCGCCATGTATGCCTCGCCGACTTACTCTACCTCGAGAAGCTCGCGTGCCT
TCCAGTCTTCTCGCATCTTCCATGCGATGGCCATTTGCGGGTCAACAAGCACCAACTGCG
GCAGGGAGCCCGGAAAGTTTAGTCACACGTTGGCGATGTGGAGGTGGACCGACATAATTT
CATATTCACGTGTTGCATGCACCACAGAGGGGAAGGAGCCGATCCAAAATCCGCTCGTGG
GTGTCGCGGTCGGTGATCTCCACGACCCACGTCCCCCATCGGTGTTGTTGCACGTCGAGG
CATTTTGGCTGTGGCTGGAGGTCGGGGATGCACCGACGCGGGAGTAGGATGCCACCACGG
CTACGTACGGCGCGCGATGGCATGGATCCGCGCTGGGGATGGATGACGGGGAGCGACATC
ACTTGGACTCCGACCAACATCGTCGTCAGAGCAATGCTGGACTGGATGGCGTGAGGGTGG
CTGGCTGGCGTGGCTTGGACGACGGTGTAGTGAAAGAGAGAGAGAAGTGCGTACGAGGGA
TTGTTTCTCCGTGATGGCGCGGACGAATATATATTTAAGAGCAGGACATTATGGAGTAAG
AGAAAATCTCCTCTACATCTTTTACGAGTTTGGCTAGGTGCCACATAGAGAAGAATAACA
TAATTTATCCTCTGCCAACATATGGGGATCAGTCACACATGCTCTTAGCGCCGTTTCGCA
GCTGGAAGTTTATGTCGATGAATCACACAATTTCAGTGTGAAAGTGTACCATACCATGAT
CATTTCAAACAATAATATACCATATTGAGGCAAAAAGAGGCCGATTTCACTGTTTTAACT
CTTTTGCTTTAGTTTAGCCTGATCTGGCCTTATTGTAAAAAAAGTTGGATCTGATTCTTT
TCCTACCGAAACTCGGGCTGACGGTAGGCTAGAACTGGCTACTGTCGTTGTTTGGTCAAC
GTAAACAGCGCCGTATGACCTTGTTGACATGGATAAGTGGCTACCACCACACAGTGACGA
GCTACATATAGGAACCTTGGCGGGCCAAATTAAAGGAAAATCCAACTATCTTATTCTGAT
GTTCCATTTACTCTTATATCCTAATGTATTTTTATTAAATCTGGACGGGCCATAACACAG
TTTGGCTTGACCATAGCTCCTCCACAGGGAGAGGCGGTAGGGTGTCATTTCCTATCGACA
AGTGGATGACAGTAGAATGTTCAAACGGTTAATTCTACCAGGTGTAATTAACTGCTGAAC
ACAGGGAATTAACTAACTGCCTGAACATTGACCCCTCAAAAAAACAAAAACAAAAACTAA
CTGCCTGAACATCCAAATAGTGAATTTTGCCGCAAAGATATCGGGGGCAAGATTTGACGG
AATGGAACCGGCAGTACCCCGAGTCACCGGCGCTTGGCACGGCGCGTACGTTGTCGTGCT
CCGGTGTCGATACCGCGCGCGCGTTCTCCGTTCTCAACATGTACGGTACACGGGCCGCAC
AGACGGAACCGGCAGCAGCGGGCGGGACGCCGAGCGAGATCCCCACGGCACGGTGCACGG
CGGGACACGCCGTCGTGCGTACAGTACCACGCCCAGCCCCAGCCCCAGCCGTCGCCGTGC
CACTGCTCCCGAGGCCGTGGCGGCAGCGTAGCGTAGCCCGTCACGGCGACGCGACGTCAC
CGCCGATCCGACACGTCCCGCCACCGCGCGATTCCCCGAGCCTCAACCAACCAACCAACC
AGCCAGCACGCACGCAACTCAAGAAACCGCGACGCGCCCGGGAGCACCATACCAGCCGTG
CGCGCTCCGCTCGACGCTGTGCGTGCAGCGTACGTGGCCGCCAGCTTATGCCACCGGAAC
CGGAAGGAAGCCAGGGAGGGATCAGGAGAAGCAGCTCGGCCTAAGCCCGGGCCTAAGCTA
AGCTGGCTAGGTGCGCTCCCAAGTCTTTGCCCCGCGACAGCGACGCCGGCCGGGGCTCCA
TCCATCGCCTAGCTGCACCTACAGCTACAGCTATAGAGAGAGGAGAGGGGAGGGGAGGAG
AGGAGACGGGAGACCCGGCTACGCATGCACGCCACCGCGCTCCATTGGCCGCCCCGTTGC
CATCACCGCGCCCATCGCTCCATCCCCCGATTAAACTACTCCATATCGCTAGTAAGCAGA
AGCAGAATCGATCCATCACACCAAGCTAGCTAGCCTCCTAGCTCGCTCGCTCGCCCGCAC
ACCCGCGATCCATTCTGCTTCTTCCCCTTCCTTCCCACTCCGGATCAGGTGCATGACCAC
CGGCGAGACCTAGCTAGGTAGGTAGGGAGGGAGGGAGGGATGGAGCAGGGGGAGGAGGAC
GGGGACTGGATGATGGAGCCGGCGTCGGGGAAGAAGGGCGGGGTGATGATCGACAGGAAG
AAGCGCTTCAGCGAGGAGCAGATCAAGTCGCTAGAGTCCATGTTCGCCACGCAGACCAAG
CTGGAGCCCCGCCAGAAGCTGCAGCTGGCCCGGGAGCTCGGCCTGCAGCCGCGCCAGGTC
GCCATCTGGTTCCAGAACAAGCGCGCGCGCTGGAAGTCCAAGCAGCTCGAGCGCCAGTAC
GCCGCGCTTCGGGACGACTACGACGCCCTCCTCTCCAGCTACGACCAGCTCAAGAAGGAC
AAGCAAGCGCTCGTCAACCAGGTATATACTCCTATGTCTGTCTGTCTGTGCTACGTACCG
TGTGTTTCTCCGTGCTCTCCGCTCGGTGGCGTGGAGCTCGTGGTGCCTCTGGCTAATGCA
TGGTCGACGGGTTTCTTGCCTTGCGTGTCCGTGCAGCTGGAGAAGCTAGCAGAGATGCTG
CGGGAGCCGGGCGGGGCCAAGTGCGGAGATAATGCCGGCGCTGCTGACAGGGACGACGTG
CGCCTGGCCGTGGCCGGCATGAGCATGAAGGACGAGTTCGCGGACGCTGCCGGGGCCAGC
AAGCTCTACTCGGCGTCTGCCGAGGGCTGCGGCGGCAGCGGCAAGCTCTCCCTCTTCGGC
GAGGACGATGACGACGCGGGCCTCTTCCTCCGGCCCTCGCTGCAGCTGCCAACCGCGCAC
GACGGCGGCTTCACGGCGTCGGGGCCGGCCGAGTACCAGCAGCAGTCGCCGTCGTCGTTC
CCGTTCCACTCGAGCTGGCCGTCGTCCGCGACGGAGCAGACCTGCAGCAGCTCCCAATGG
TGGGAATTCGAGTCCCCGAGCGAGTAAGTAGAGCCATCGGTCAAGCACCATGCAAGGAAT
CGCCGACGTGATCGACCATGCAACAGATCAGTGTTCCTAACACAGAGCACTATACTGCCG
ATCGAATCCGTGGAGAAGACGACGGCGCGATCGATCATATGCAACCGAAGATGGTGGTGT
CAAGTGTGTACATAGCTCGAAACCCAGGTCTGTCCAGTCCAGTACGTCCAGGCAGCCTCT
TCCTTCTCAATCAGCAGTCAGCACGCCATTTTTCTTCACCCTCTTCCTCTTTAAGAATCA
CTTGCTCTTGTCAATTACCTGCCACACCGTGTAATCCACAGGGAAACTAGTCACAAAACC
AAATTATAGAGACCGATCTTCAGATGCAAGTGCATGCAACTATTTAGCTAGCTAGTAGTA
ATACGCATCCATGCATGGCTGTTCATCATGTGGCCGCCACTTAATAAGCTTTCTCTCTTC
TCTTTGATGTGATCAATTGGTTCCTTGGAATGCAACACAATGATTGCGAGATCATGGCTG
ACTGGAATAGCTAGCTAGATTGAGGAGAAGCATGTGGGGGAAAGCTAGGGAGGTCCGGTC
CAGGCTGCTGGATCAAGATTCCTTCACGAGCAGGAGAGGAGAAGGGGAATCGAACAACAC
ACTCATCACTAGCCAGTGACCAGTACAGCACTGCGGTACGGGACAGTACAGGCCAGGGTG
GCACAGATCACAGAACGTGCATCCGGCCATTGTTAATTTCAAACCAAATGCATGGCAAGA
GGCGCGTCGTTTAGGTCAGCCAGAAAATATATGGAAAGGGATATGGCCTAGCAGTGTATT
CTTGGGTTTATCCCTAGCTAGTCACATGTTTTTCTTTAGGGAGACGTATATTATTATAGA
AAACCCTAGTAAGAAAAATAAATTAGCTTCCAGTCCTTCAGAGTCCTCCACATCCCCCCC
CCCCCCCC