Contig Data
morexGenes
Links



Map Locations of contig_56842 (5941 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56842

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69702 4 2378 bp AK365267 Available Available None





CDS Structure of MLOC_69702






Contig Sequence (5941 bp)

>contig_56842 5941 assembly3_WGSMorex_rbca.fasta
CCGCAGTCCCCCCCCCCCCCTCCCCCCGCGCCATCGCAGGAGGACGCCGCCGGGCGAAGC
CCGTGCGGCTGACGACGATGGCGGGGACCTTCTCGCGGCATCTCTGGAGCGGAGGGTGAC
AACTCCAGACGAGGTCCTGCGGTGTCGCGTGGCGCGACTGCTCAGACATGCGGCCGCGGG
GCTCGGCGAGCAACAATTGGTTCCGTGGTGGTCGGGCTCGGCAGCCTGCGTTGCTCCGTG
CGGGCGCGGTGTGCTGCGTTGTGGATCCAGGTGGGCTCGCAACGGCGGCCGGATATGTGG
TGGTCGGGCTCGGTAGGCTGCACTCCTCTAGGGCAGCGGTGTGCCATGGTTGCGGGACCG
GTGACATGGTGCATGCGGGGTAGACATATATGACGTGTGCGTCTTCGACGACGACGCTCC
GATCTGTCCGCCGTGGGGGCGAGTCTAGAGTGACTTGGCTCCGAGGGCTTGATTTGGTTG
TCTCCTCCCCTCCGTCGTTGGCGGCGATCTCGATCAGGAGTACACCCAGTGTAAGGCGGT
CCTAGGGTTCTTTTCGCGTCAAGATGGTGTTCTAGTAGATGTCGTCATCCATTGACTTGT
CCATTGATGAGTTCCGGAAGGCTCCGTTGGAGATCTCCATTGGATGCTTGTTCCTTGTAG
ATTGGTGGATTGAATGGGATTCGGTCGTGTGCGCCCTCATCTCAGCCTATGTGGCTTCAT
GTGGGCGTGATCCGAAGCTTTGTTTTTTTGACATCATGGAACATGTCGGTATTTCGATTT
TCATGGTGAAGATAGTGACGGAGAATGTCATGCGGCTGGGATCTGAGGCTTATTAATGGT
GGACCGAGTCTTCGAGGCCATGAAGACTTTGTTTGATGTTTCGTGACTCGTAGCAACAAC
ATTGGCAAGTGGGGGCATAACACATGAGGAGTATAGAGTCTGTTCTTTCAGGATAAAAAT
CTAAGGTCCGACTTTAATTGGTTGTGTGTGGCAATGATTTTGTTGAAGGTATTGTTTTGA
AAGCGTGGATTTCTTCAGGGTGAAAACCTAAGATATATGATCGAACGACGTCGTAGTTTA
TGCACTATTTCCTTCTTGAAGGTGTCGTTTTCGAAGAATTTGAATTTGAAGTGTTGTCTT
GATGATGGTTTGTGTTGCAGCTACTAGTAATTGATCACCGTAGTGGAATCTTTTTTTTTA
CTTCTTCTTTTAAAAAAATAGATTGTGTGCATCTATAATGTCTTTAGAACATTTTATTAT
TGCAGGATGTGTATGTACTTCCTCCGTCACGGTTTAGAAGGCATGCTCGGAAATTTTCGG
GAACCTAGCTGGTTATTGTTTGGCTATGAGATGAGATAAGAAATATAATTTACACTATGC
ATGCATATAAAAGTAGTAATTAGCAGCTAGAAGTAAATGCAACACGCCTTAAACCGTGTC
TATTATGAAAATGCACGTAAATTTAAATGTGTCTTCTAAACCCTGACGGATGTAGTTGAT
ATCATTATGATATTAATATATTTCAGAAAAACTACGGGGCCGGGTAAACATGGCAAGCAC
GGACAAAGCGTGAGCGAAACAGAAAATGCCTAGCACTATACTAACACATGCGGGACTAGG
CCATTAGGACCACACAGTGCAAGCGTTGCATCTCAAATCAAATCAAGTGGGGTGAAACGT
CCGCCCAAGTAGGGGGGAACACGTGCCCAAACCCCCAAGGAATAACGATCCGGGGTGCGC
TCCGCCGGGTGCCCCGAGCATTTCGCTTCTTCGCTAATACTGTAGTAATCAGACCAAAAC
CTGAGGTCACAGAAGAGACGAGGCCTCGTTAATTAATCAGCCCGGCACTTGGCTTTCAGC
CCCTGTTATTAATCAAAGGGATGCTCGACAAGGAATTGAAGGCCGCTTTGCGAATAACGC
ATCGGCCCGCTACTCCTTCTAATTAAGCCGGATTTGATTGATGAATGGATTAATTAAGCC
GGGGTTTAGGAAGAGCGGCTACCAGAGAGGGGAGGAGGAAGACGACTTGGTTTGGTTCGG
CCTGGGTGGACCGACTGACTTGGGACGATAAGAACGAGACACGCGCACTCGGAGCCGGAG
AGAGAGACCCCTCCCATTCCCATTCCCATTCCCCTTCCCATTCCCGTTCCCGTTCCCGTT
CCGTCCTACTAAACCCCTCCGTCGTCTACTTCTAGACGGACGCCCAGCACCCGTCCATAT
ATCGCTTCTTCCGCCGCTCCGCCTCCACGCGCACCAACCGCCCGCCCTTCGATTCCCCCG
AGGCCCCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGCAAACAAGACCC
ATTCTTCTGGTTCTTGGTGCGGTGCGGTGCGGCGCGCGGGCATGGCCATCGACCACGAGT
CGCCGTTCAAGGAGCTCCGCCTCAAGAACAGGAGGATCATGGTAATAATCGGTTAACCGA
CCCACCCTCCTCCCCTCTCCCGTAGCTTGTTGTGCTAGCTGCGATGGCGCATCGCCATTC
CCCTCCTGCTTGATTGATTGGTGCTAGTGGTGCTGGTTTCTTGCCTCGTGCGCGCGTTTC
GTTCTGTTTGGCCCGTGCTAGCTCCTGTCCGTGGTGAGGGGAGGGAGGGAGGAATGAGGG
GAACTGGTTGCGTTACTGTTGCATCGGGCGCGCGGGTTGCTGCTGTGCCAGTTCGTGTCC
ATCCTGCGACGAATGGCGGTCAAACCATTGGTTGATTCTTCTTCTGCGTCTTCCCTCTCC
CCCACCACCTAATTAATGGCGGTGTTTCTGTTTTGGTTCCGCGTCGTCGTCTCTCTGCTC
CGGCATTTGGATTGGATGCCTTGGAATTTGGTGGAAGTACTGGTCCTAGCCTTCGTGTTT
CTGTAGTTTCTTATCTCTGATTGACTGATTGATTGGTGAGGTATGGCTCGCCGTAGATTT
CTGGCAATCTTGCCGGCGTTCCGACGAGATCGATTTCTCGCTTGTCAAAGACCCAATGTT
TCCATCGCTGAGCATTTCTTGTTGACCTGACCGATCTTTCTTGTGGTGGTTGTTGTGTGC
AGGGAGGCGGCGCCCCCGAGCCGGAGGAAGAGGAGGCGGAGCCGCAGGTGGCGGCGGCCA
CGGCGGCGGGGGAGGAACAGCAGTGGCCGCAGTGGCTGCGCCCGCTGCTGTCCGCGCGCT
TCTTCGCGCAATGCAAGACGCACTCCGAGTCGCACCGGAGCGGCGAGTGCAACATGTTCT
GCCTCGACTGCGCCGCCGGGGCCGCCGCCGGCGCGGCGGCGCTGTGCTCGCTGTGCCTCG
CGCACGGGCACCGGGGGCACCACACCATCCAGATCCGCCGCTCCTCCTACCACGACGTCA
TCCGGGTGTCAGACATCCAGCGCTTCATGGACATCGCCGGCGTGCAGACCTACGTCATCA
ACAGCGCCCGCGTCGTCTTCCTCAACGAGCGGCCCCAGCAGAAGCAGCCCGGCAAGGGCG
GCGGCGGCGGCGGCGCCGGGAGCGCCAACCTCTGCGAGGTCTGCAGCCGCAGCCTCCTCG
ACAACTTCCGCTTCTGCTCCCTCGGCTGCAAGGTGGCCGGCTGCTCCTCCGACGGGGGCG
GCCGCCACGACAAGGCGAGGACGATGCGGGCCAGCAGGCTGAGCCGCGCCAAGGGCTCGT
CGGACTCCGAGGCCGCCTCCTCCTCCTCTCCACTGCGCAATGCCGCCAGGCACAGCTTCA
CGCCGTCCACGCCGCCGCCGCCGCCGCCGCCTCCAGCGGCCAAGCGGCGCAAGGGCATCC
CTCACCGGGCGCCGTTCGGCAACCTCATCATCGACTACTAGGCGCGCACCACCCGCCATT
GACAAGCTACGACCCGCACGCCCAGTTGCAGAGTGAATGGGGTGAGAAAGCGGCCACCAC
TTCGGTGCCCGCCATTGCCTTTGGTTGTGCTTCTCGATGTGGATTCCACCAGTAGCTTTT
CAGGGAGAAAGCAGGCAGGTGGACGGACGGAAACACAACTGAAAAAGCGCCAGCCTTTTC
TTCTTCTTACTGCTTAAAATCATCTTCATCATCTAGGACAGACACCAAAAATTACCACCA
CACTACAGAGAGATTAATTACTGTATATGATTATGGCCCTGCTCTGCTACTACTGTCTCT
ACACTAGACTTCAGTTTTGTGGTTCATGTTTCTAGGTAATTACCCTAGCTAGAGTAATAA
GCAACTGCCACTTGTTGGTCAGGTTTTGTGATGTCTGGCTCTTGTTAGTTTGTGCTTTCT
TTATCTGTAAATATGGAGTGCTGGGAGAGGATGACTGCTTGTTAAAAACATGGTGTTGCT
CAACCTTCAATCTTCTTTCCGTATGGGTCAATGGTTGGCTCCGGAGTACAGTATTATTCA
TCTCACTTGTTGTTGAGTTTACTTAACTGTGAGGCTTGCTTGACTGTGATGTTGGCGATT
AGCTGACGCCGTCACGTTAATGCCACCCCCAACAAGCAAAGCCGCACAGCTTGCGTTGAT
GCAGGGGCAGCATGAATGTGATGGCCTGATTGATTATCACTTACTTGTAATCTAATCGTC
TTGTTCTTGCTCCTGTGGCTGCGGTTGCGGCATTAAACTAAGCTGAATTTGAACGCTTCT
GATACGATGGCGATCCGCCGGTCGACAGAGCAAGGCATATACAGTAGTATGATTGATGAA
CCCGACGCCGAACGAGAATTGTTTGCACCCAACAGGAGGGAAAGGGGGAAGGGAGATGCC
GCATTTTCTGCATTAGGAACCGAGTACGTAATTCGCACGAGCATCTTCCTATCTCCGTAG
TGCTGCAACTTTGCATATCGAACTTTGCTACAAGAATCGTCCGTCTTCAAAGAAGAATAC
GGAACATTGCGTGCATTGTGTTTGTGTGAATTGGAACAAAATATGCAAGGCAGGCAGCAG
AGACTTTTTTTTCCTTTTAGTTTTATTATATGAAAATGGCAGCGAAAGCCCTCTTTCAGT
GGGGTGGATGTCGACGTTGATTGATCAAGACGTGGATTGGGAAGAAAGATGCTCTGCGTT
TTGGGATTTTTGGTTGGTTCGTGCCAATCTTCGCCGAGTCAAAAACCAGGAACGGCGTAA
AATCTAGGGGAAATATGGTGCGTCGTGAAATGCGACATGATTGCTTCTGAGATTTTGTGC
CCTTTGCTCCTCCAAGTCATGGCTTGTCAACTTTGAACGGTCTCCTTTGGAGTAGTATAA
TTCTCCTCCTGGTATGTTCTGTGAACTACGAGTACCATGGAAGTAGGATATTCTGAAAAC
ACAAGAGTAAAAGGAAAATGCTTGATTTAGAACGAGAAAGTGCTGGATTTAGATGTTGCC
GCTGTATGAAAACGAACTTGGGCGCGGATTTTACTTTAGGACTCATGGCACAGGCTTTTT
ATGTCTAGGAATTCACTTTCGATAAAGAGTATACATTAATATCGCGGAGATACCAATTAC
AATCAACCTCTGCAACAACGCAATGCCCTGATGACATGACGGATGCACACAACCAAAGAA
ACGAAGAAGCTCAAAAAGAAAAGTCTCGCTACAGAGTTGCAGTGCTTGCAACAGCAACAC
AACCACCACCAACACAACACTTGATGTCCAAGTACTTTAAAAACAACGTCTCCAAGAAGA
AAATTGTCGGCGTTCTGGGAATGAGGGTATCCACACCTGCCTGCCCGCGACCCAGCGCCG
GCCCACTTCATCGACCTAAAACCAATGGGCTCGGCGTCACTCAGGACAAGACCCTCGCGA
GGGACCAAGCCTCAAGAGGAGGAGCAGCATCAAGACCCGCAGGGGGCCTCCTCAGGACCC
CTCTGGGACGGCGGATATTCTGAGGCGAGGTCCAGCCTCAGGAGTCAAGGGTGACACAAG
AAAAGGACAGGAGAGCAGCAAACAACAGGGTGGTCAAGTTCCTCCTTTAGTGCAAAGGGG
G