Contig Data
morexGenes
Links



Map Locations of contig_56841 (3021 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56841

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69701 4 1288 bp MLOC_69701.1 Available Available LOC_Os07g46330.1, FRAME:+3, EVALUE:2e-116, 13107.m04879 protein uncharacterized UPF0114 domain containing protein, expressed





CDS Structure of MLOC_69701






Contig Sequence (3021 bp)

>contig_56841 3021 assembly3_WGSMorex_rbca.fasta
ACCCACGACCACACCTCCTCCCTCACACCACCGACGACTACACCGGCGCCAATGTCCGGA
GCAGGGAGTTCATCGGGCTCGGGATTAGGTGAGTACATGGTAACACCGGATCTATCTATG
CTTAGTCGATCTACGGCTTTAATAGCGTGTACTGCATCGTGGGGGAAACTGCCATGGTGG
TGGAGACCTCGCCGGACCATCCGCCGAGGCTGGCCAATGCTGCCCACAATCCTTTCCGTT
CAAGGCCGTGACCGATCGAGGCCTAGCCTAGTCGCACGTAGCAGCACAAACTTTCTTATC
CGAGAGTACGCCATCGGCGTACAAGCATCAGCATTTCAGCACAAACTTTGAAACTTGAGA
GATTTTGTGCTATATGAATGTTTTGAATAAAGTTCTTCCTTAGTTCCTACACTGTTATAG
TACAGAGGTTCGCCGTGCTCGTCTCTGCGATGAACCGGTCGACCACCGCGCATCGATCCC
TTCTGCTCTCAGCACATCAGGGTCGATCGATGCATCGGTCAGATACCAACCTACATGAAC
ACCACGAGGCCATGGCGTCTGATGACCGGCTGGCACGGTTTAGCTACAAGTGGGGCATCA
CCGACTCCTCGTGCTCGGGCCGGTGGAGGTTATGCAGGATGTAGAGGGAGGCCGAGGAGA
GGAAGATGCAGACCGAGTAGCTGAGCAGGTCCAGCCCCGTGGTGATCTTCACCATCTTGC
TCCGCTCGAACATCTTCACCAGCAGGATCATCACGATGACGTGCCCAACCTTGGTCTTGA
GCTCGTCCAGGGACGTGATCTTCATCCACTTCGGCCTCTCCTGCAAAAACGACACGAACA
AAGTTCAGATTTCTGAATCTGAATTTGTAGCGATACTTGTTAAAGAATGCTTTGATTTGG
GATCGGTGTCACCTTCAGAGCGAACATCCCGAACAGCGACGATCCTTGCAGAGCCCGGTC
GGATCCGGAAGGCAGATCGTTGGACGCGTTGCTGATGAACAGCCCGTAGAGACCCATCCC
GAAGATCAGCATGACGGTGCCAGCAAGATACACATCTGCAACACCGGCAGTTGGTGTGAA
TCATAGTCGTCATGTGCATCAGTTCAGTTTGGTACCGGAATATCTCACTCACCAATGGCC
TCGACGACCTTGAGGACCATCTGCCCTGTATGGACACCTTTGGCGCAGCTCGTCCAGTAG
ACACAATAGGCCTCTTTTATGTACACACATCCCTGATCATCAACAGATACGAGATGCTTA
ATTAGATCCATTTGAACGACGTTGCTCACGAATAACAAGTACAGTACTATACTGTAACTA
TGTCTGGTTATCTGAATCGTGACGAGATGCAGAGATGGGACTGAGAGGAGTTACGTTGAG
GAAGCAGAGGAGGGAGCCCGCCAGCGATCCGGCGACGGCGAGAAGAGCCAGGAACCGGAA
GTCGAAGATGATCTGCGGGAAGAACAGCATCAGCTAGCACACTCCGACGATAAGCAAAAG
AGATAACCTTGGATGCTCACCCTCTCGACGGTGGTCTCGATGGAGGTGGACCTGGCGGTG
CCGGAGACGACGGCGCCGTTGGTCCCGCCGTAGTCGCGCGCCTTGGCGTTGGAACCCTCC
GAGCCACGCAGCACCGCGTCCACCGCGGCGGTCGAGCCGTCGCCTCCGGACGGCGAGGCC
GCGGCGGCCGAGGCGACGACCGCGCCAAACCGGGACGGCCGGCGGTAACCAAGCCGGCTC
GTCGCCTCCCTTGGCCGGAACGGCGGGGCGGCGGTGTTGACCGGCGCGAGGCAGCCGCGC
AGCAGCAGGAGTGCCATGGCCCGCGCCGGGCAATGCGGAGCAGTGAGGCGACTGGCTGGC
TGCTCGGGACTGTGTGGCTGGCGGGCGCGGTTGTTTTCGAGTGGAGCGCAATGAACCGAG
TGTGAGGAGAAGAGAGAGAGGTTTATCGGGGGCACAAACGACGACGACGACGGCGTCGCT
GTCGGCGATGTGGTTTGTAGCACATGGCGGGGAGCAGTTTGTGGCGCGGAGGTCTGTTGC
TTCTCGGGCCAGCATGACCTCACGGGCCGACATCCAAAAATCGACGGGTAAAATGAAAGG
AAACTGAGCCTTCTCAATTGTAAGGGTAGGTCAACATAGTAAGAACTATACTCAACTTAA
TTTTGTTTCTTTTTGCGGGTGGGTACTAAACTTTTTTGGACAGTATTACGGAGCAGCGCC
GCATAGATGCATTGCCGTGCGACGGCTACCTAATCAGTTTTCAGCCAATAAATGAACATC
ACGTATTTAATTTCATTCCTACTTGCCCATATTATTATTGTCTCAGGCCACAAGCATGTC
TTCATGCATGCATGCAAACCAATACATCAAGTTGATGTAAACAAATATTCCCCTAATTTT
GAGTTTTAAAGAAGTTTTATCTCCTAAACCATTAATTTAATTAATGATCCGCTTTAACAA
TTAGGTTTCTCGTGACAAGATCTTCGAATCTAGATTCCATGTTGATATGTTTCAACACCT
TTTTTTCTCGTCGGTAATTGCCAGATTACTGTCACTTAGTTATCGGTATATTAGCAACTT
AGTGACCAGTTTAAAAATTACTTAGTTGTCATCTATTTTTACATTTTAGTTGTGTCAAGT
TACCATTTTTATTTCATGCAGCTTGCCAAAAAAATAACACTAGACAATAGTTTTAAAAAT
ATAACTTGTTTGGCACTTTTTAATGTTGTTTCGTACAAAGTTTTGTAGCAGTTTTTATTA
TACATCATATAAAAAGCATGTGACAAGTTATGTTTGCCAATTTGAAAATATATCAACCTG
TCATATTTACATATAACTTTGCCAGAAAACTATTTTGTGTGCTTGTTAGTTTAACTATGC
CGAGTTGTCATATTTGAATTTTTGTTCAAAAGGACCCCTAGCCGAGTCTATTTGTCGGAA
AGGACCACCTATAAACGAAAGTAGCAAAAAAGACCCTCACCCACCGTGGCGGCACGCGTG
CCAGGCGACGCGTGTCCCCTG