morexGenes - Barley RNA-seq Database

Contig contig_56719
Source Contig contig_56719
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_56719 (10038 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_56719

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_69629	1	379 bp	None	Available	Available	None
MLOC_69628	2	4855 bp	MLOC_69628.1	Available	Available	LOC_Os10g33040.1, FRAME:+3, EVALUE:0.0, 13110.m02903 protein receptor-like protein kinase precursor, putative, expressed
CDS Structure of MLOC_69629

CDS Structure of MLOC_69628

Contig Sequence (10038 bp)

>contig_56719 10038 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGCTGACGCAGCCTGGTGTCTAGTGGGAACCAGGTGGGCCTCTGG
TGGTTCTTTGCTCCAATATTTCTCTTTTATTCCAAAAAACCGTCAAAAAGTTTCGTCTAA
TTCCTTGAACTTTTATTTCTCCACGAAAAACAACAGCACGGTAGTTCTGCTGAAAACAAC
ATCAGTTCGGGTTAGTTGTAAATAAATCATATAAAGTGAAGTAAAACCTTATAAAAGTAT
TGTAAACATAGGAAANNNNNNNNNNNNNNNTTCATAAATTATTGATATGTTGGAGATGTA
TCATGCTACAGCTTGTCGTGCCTCGTGCTTGGCTGGTATCAGATGGACGTCTCGAATGCC
TTCCTCCACTGACATCTTGCAGAACAGGTCTACTACCAGTAGCCCACCGGCTTGATTGAC
GCCGCTCATCCAGACCATGTGTGTATGCTCTCACGCTCTCTTTATGGGCTCAGGCAAGTC
CCACATGCATGGTACCAGCGCATCGTTGCCTTCCTTCAGCATCTTGGGTTCCGAGCTACT
CGCTCTCACGCCTCGATGTTCATCTATCATCATTGCCATGCAACTGCATACGTCTTGCTT
TACGTCGATGACATCATCTTGATGGCTTCTTCGGTTGAGCTCCTTTGCCAGCTTACAGCT
CGCCTCAGCATCGAGTTTTCCATCAAGGACCTAGGTCCTTTGCACTACTTCCTCGAGATT
GAGGTGGTGCGGCATACTGATGGGTTCTTTCTTCCTCAAAAGAAGTATGCCCATGAGTTT
CTCAAGCGTGCCCTCATGCTTAATTGCAAGCCTCTACCTACGCCTATCGACACAAAGGAC
AAGGTTTCTGCACTTGACGGTGCGCCGGCGCCGGACGCTGCCTTCTACCGCTCCATTATT
GACGCTCTCCAGTACTTGACGATCACTCGGTCGGACTTGCAGCATGTTGTGCAATAGGTG
TGTCTTCACATGCACTCTCCACGTGATTCTCATTGGAACCTGGTGAAGCGGATCCTTTGG
TACATCCTCGACACTATTGCCCTTGGTCTCACATTGTTGTCCTCATCATCCACCGCTCTC
GTTGCCTACTCCGATGCAGACTGGGTTGGCTGTCCCGACATCCATCGGTCTACCTCCGAC
TGTTGTGTCTACCTCGGTCCCTCACTCATATCATGGTCGTCTATACGACAATCAATGATC
TCACGTTCCACTGTCGAGGCGGAGTACCGGGTTGTGGCTAATGCTGTCGCCGAGTGTTCA
TGGCTTCGACAACTTCTTTAGGAGCTACAACTTGACGTTCTGAAGGCCACCATCGTCTAC
TGCGACAATGTCTCCGACGTCTACCTCTCCGACAACTCCGTTTATCATCGTTGCACGAAG
CACATTGAGCTAGTGGAAGGTAGGTTGTACCAGGAAAAATCCATGTCTACTTCCATTAGG
ATACCTCCAGCACACCTAGTGGAAGGCAGGTTGTACCAGGAAAAATCCCTAACACCAACG
AGAGATTTCAAATAATTGGTAGTAAAAGGTTCTTGCTTAGTCTCCTCAAACCTTATCCTA
GCGTGTAGATAGTGTGCTGTGCATATTTTGTGGAGAACCTACAACGTATGCACAGTGAAT
AAACATATAACCATTTCATATTAAAATAATAATATTGTTGCTCCCACCCATATTATCACC
AAAAAAACAACGTACCAAGGGCCATATGAATTAAATTTATCAAACTTTTAAACTCAAAGC
ATGGAAACACGAGACAAATAAGAGCAACTCCAACCGGTCGACCCAAATGGACAATCATTT
TGTCTGCTTTTTGTTCGTTTGGGTCAGCCCAGCAGACGCCAATGTTCATTTCGCCGTTTG
GGTCGGCACATGCGTCCAACGCTGGTCCGATTCATTTTTACCGGCGTGCGAAAAAAGTAT
AAAGTATTTGCAAAAATAATAAATAAGCATAATTAAACATTAAAAGCCGACCACGAAGGA
CGGCGAGAGTCCACACGTCTGTATTACATTAATTAAAAAAACTAAAACTACGAGGTAGCC
CTAGGCATCGTCGTCGTCGTCGTCGGGGCCTGTGAGGTCGACCAGCGTAAGCGCAGGGCC
GGCCCAAGGGAACGCCGTGTTCCAGAGCGCAGCTGCTTGCGCCTCTGTTGTGTGTCCCGT
CGGCGCGGGCTGTGCTGGTGGCGGTGGCAGCGCAGCAGCACGGGCGCGCTCCTCCTTCTC
CAACTCCCATCATTCCTCCTCCGCCTCCTTCTCCAGCTCCATCAGCCAGCGGGGAGATGC
CACGGGGGTAGAGCGGTGCCTTGCCCTTGTTTGGGAAGTAGCCGACCATGGTGCTAGGGT
TTGGTCGCCGACGAGGTGGCGAGATGGGGACGAATGGGTTCTGAAAGCAGAGGAGGCGGA
ACCCACCGCACGGGCAGATTAAAAAAGGCCGACCGCGACCGCTGACGCGTGAGCCCGAGA
AGGACATCGTCATTAGTAATGTTGACCGTGGGTGGTTGGGACGGACACCGAGAGGGCACG
TGCGCGTCCGCGCCGACGCACTTCAGTCCCAAATTTGGGCGGGAAATGGACCGGTGCAGA
CGCGAAGCGGACACGTTATGGCAACGGGTCGGCGCATTGGGTCGTCCGTTTTGTCCGCAC
GGTCCCATATGGATGGCGGCGGACGAAATGGGTCGCTCCATTGAGGTTGCTCTAAGTACT
CCTCTATTCTAAAATAAGTGTGACAATTTTATATTAACTTTAGTACAAAGTTTTACAATA
TTAAGAAGATATTTATTTTGGAACGAAGGAAGTAGTTTAAAAGCTTTTCACCAAGTTGCA
TCTCAGGCCCGAGGCATCCCCGAAACAGCCGAGAAATGTCTTAGCGACCTCCATCTTGCT
GAGGAGTGGCTGGATCAGAAGCATGAGATCGTCCGCGTAAAGGGCCAGCCTGTGATGAAC
TGCCCAAGAGGTTAAATGGAATGAACTGGTTGGTTCGTTGGCACCATCAAGCAGCCCATC
GACGAAGAAGCACCAAGAACCATCGCAGTCAACTGCACCTTGCGCAGACCACCGATAACT
GGAGACCAGATCTGCATCACACGCCGGAGCGCGCTTCCTCGTCGTCATGGGCTCCAAGGA
ACATCCACGCAATGCCAGACCGGACAGACACACACCGGCCATGCCCCTTGCCGACCAAGC
CGTCGCTTGAGTGCCGTACATGCCGCTCAAACCCGCACCCTGGGCTGCCCAGCCGAGCCG
CGCGCCCAGGCCTCGCGGCATCGCCTCTTCGCGTCGTCGCAGCGCACTGCAACGCCACGC
GCGCACAGACCCACGACGGCCTGCAACGCGCATCCAACACCGGTGTCACATCCCGCGCCA
GATCCCCTGATCTGCGCCTCCCGCGCATCCAACACCGGCGCCGTGTCCATCCACACCCGC
GCCGCACAGGAGCCCTGGACCTCCAAGCCCAGGCACCTCCAACCGCGCTGCGCTCGGCCC
TTCGCGCCCACGACCACACACACCCACCTCCCACCAACCCAGGGGAGGCCGCAACCGAGC
AGATTCCCGCCGTCACCGGTCGTCGTCGGGCTTTGCCTGCTGGCGTGAGCCGACGACGAC
TGAGGGGAAGGGAGAATGGGGTGACGACGGCGGCGAAAGCTAGGTCTCCGTTCGAGCCGC
TCCAGGGAGCGATGCGGGGAGCAAGAGGAAAACGTTCAGATATCCGGATTCATATCGTCT
GTTTCCTTACAATTTATTACTTCCTCTGTAAACTAATATAAGAGCACTTAGAACACTACT
TTAGTAATCTAGACCCAGAGGGAGTACTACTGTACTAGGAAAAGAAACTCAAAATAAGGC
TAGCTGCCCGTTTTTCATGGCTGAAGGTATAACTGACATTTTAATTAATCAGTTCATTTA
TTAACAGATAGAGTCCGTCATGTATAGATAGACAGTCTGGAACCCATGCATTGTCCAAGT
TTGGAGTGCAGTTACTGAATACTGAGCCCACGACATGGATGAGGCACGGTCAGACGGCAC
AGGGTGGCGAAAGGAGGAACTGACGGCGATGGCGACGGCACAGGGTGGCGAAGCCCCGGC
GGTTGTCACCGTCCGGCAGCAGCTCACGTTCGGCACGGTCCAAATTCTAAATTTGCGGCT
GATCACGATGGATCAATCAACGATTCTACCAGTAAAGAGAAATTGTCCACCATTTTTATG
CGAGTCAACGCACGGCAAGCCGCTGGTATCATGGACAAGCAAAGCACAGGCTGTCGGCCC
TAAAACCCGGGCCAGTGGCCTCCGGGATCCCGGTACGCGACGACGATGCCTCCAAGTCGT
AGTCGTATTCCTCTTCCCCACACTCACGCGCCGCACCGCACCACCGAACAACACGAGCAC
ATGGACGCAGTGGCGCTTCCATACTCGAGTCAACCAACGCCCCACTGACCGGCCGGCCGT
GCCGCGAGCTGAAATCCCCCCTCCTCTCGCTCGGTCGCTCGCCACCCCCGACGGCGCGCT
CCGTCCCGCCAGCCAATGCCGACGCCAGGCGCACCAACCCTCATCCTCCTCCTCGTGCTG
CTGCTCTCCGCCGGCGCCGCCAATGCCGCGACGGAGGCCGAGGCGCTGCTGGCCTGGAAG
GCCAGCCTCGACCGCCCGCTCCCGGGCGCGCTCGCCACCTGGGCCAAGCCAGCGGGCCTC
TGCTCCTCCTGGACCGGCGTATCCTGCGACGCAGCCGGCCGCGTCGAGTCGCTCACGCTC
CGGGGGTTCGGCATCGGCCTCGCCGGCACGCTCGACAAGCTCGACGCCGCGGCGCTTCCG
GCCCTCGCCAACCTCGACCTCAACGGGAACAACTTCGTCGGCGCCATCCCGGCGACCATC
TCGCGCCTGCGCTCCCTAGCCACGCTCGACCTCGGCAGCAACGGATTCAACGGCTCCATC
CCGCCGCAGCTCGCCGACCTATCCGGCCTCCTCGAGCTGCGTCTCTACAACAACAACCTC
GCCGACGCCATCCCCCACCAGCTCAGCAGGCTCCCCAGGATCCAACATTTCGATCTGGGC
TCCAACTTCCTCACCGACCCGGACTACGCCAGGTTCTCGCCGATGCCCACCGTCAGGTTC
ATGTCGCTCTACCTCAACTACCTCAACGGCGGCTTCCCGGAGTTCGTCCTCAAGAGCGCC
AACGTCACCTACCTCGACCTGTCGCAGAACAATTTCTCGGGCCCGATACCTGACTCGCTG
TCGCAGAAGCTCCCCATCCTCATGTACCTCAACCTGTCCATCAATGCTTTCTCCGGCCGG
ATACCGCCGTCGCTGTCCAAGCTGAGGGATCTCCGGGACCTGCGGGTTGCAAATAATATT
CTGACCGGGGGAGTCCCCGATTTCCTCGGGTCCATGTCCCAGCTGAGGGTTCTTGAACTC
GGCGGCAACCTGCTCGGCGGGACGATCCCGCCGGTACTTGGCCAGCTCCAAATGCTGCAA
CGCCTTGACCTCAAGAGCACCGGGTTGAATTCCACTATTCCACCGCAGCTGGGCAACCTT
AGCAATCTCAATTTCATGGACCTGTCCATGAACCAGCTCACCGGTTTCCTGCCGCCGGCG
TTCGCCGGGATGCGCAAAATGCGCGAGTTTGGCATATCGTCCAACACACTCGGCGGTCAG
ATTCCGCCTTCTTTGTTCAGGAGCTGGCCAGAGCTCATATCGTTCCAAGTGCAAATGAAC
TCCTTCACTGGGAAGATTCCACCGGAGCTCGGCAAGGCAACCAAGCTGGGGATCTTGTAT
CTCTTCAGCAACAAGCTTAACGACTCTATCCCGGCAGAGCTCGGGGAGCTGGTGAGCCTG
GTTCAGTTGGATTTGTCCGTGAACTCTCTCACGGGACCGATCCCCAGCTCGTTGGGTAAC
CTCAAGCAGCTCAAGAGGCTGGCACTTTTCTTCAACAATCTCACTGGCACTATCCCGCCG
GAGATTGGCAACATGACATCTTTGGAAGTCTTGGATGTCAACACCAACAGTTTGGAAGGT
GAGCTGCCTGCCACCATCACAGCGCTCAGAAACCTTCAATACCTTGCCCTGTTCGACAAC
AACTTCAGTGGTACCGTACCGCCGGACCTTGGAGAAGGGCTGAGCTTGACAGACGCGAGC
TTCGCGAACAACAGCTTCTCTGGCGAACTGCCGCAGAGATTGTGCGACAGTCACACGCTG
CAGAACTTCACGGCGAACCACAACAACTTCAGCGGCAAGCTGCCACCGTGCCTCAAGAAC
TGCACGGGGCTGTTCCGGGTCAGGCTGGAAGGGAACCACTTCACCGGTGACATCTCAGAG
GCGTTCGGTGTCCACCCCAGCTTGGACTACCTGGACGTCTCTGGGAGCGAACTGACCGGG
CGGCTATCTTCCGATTGGGGAAAATGCACCAATATCACCCGCCTGCACATGGACGGCAAT
GGTTTATCGGGTGGCATTCCAGCAGTGTTTGGGAGCATGGCAAGCTTACGGGACCTCAGC
TTGGCTGACAATAATCTCACAGGAAGTGTTCCACCTGAGCTGGGCCAGCTCAGCCTCTTG
TTCAGTCTCAATCTTAGCCATAATGCCCTCTCGGGGTCAATTCCCGCAAATTTGGGCAAC
AATTCCAAGTTACAGGAAGTCGATTTGTCTGGGAACTCGCTTACCGGGACAATCCCGGTG
GGCATAGGCAAGCTCCGTTATCTATTATCTCTTGATATGAGCAAGAACAAGTTGTCAGGG
CAGATACCAAGTGAGCTCGGCAATCTGGTTGGGCTGCAGATCCTTCTTGATCTGAGCAGT
AACTCATTGTCGGGTACAATCCCCTCGAATCTTGAGATGCTGAGGAATTTGCAGAAGCTG
AACCTGTCACACAACGATCTCAGTGGTTCAATACCACCAGGGTTTTCTAGCATGACAAGC
CTTGATACAGTCGATTTCTCTTACAATCAACTCACCGGTAAGATACCATCGGGGAAGGCT
TTCCAGAACACATCACTTGATGCCTACATTGGGAATTCTGGTCTGTGTGGTAATGTGCAA
GGTATAAATTCTTGTGACCCCAGTTCTGGCAGTGCATCTTCCAGGCATCACAAGAGAATA
GTCATCGCAATAGTTGTGTCAGTTGTTGGGGTTGTGTTACTTGCAGCCCTTGCTGCTTGC
CTCATACTGATATGCAGAAGGAGGCCTCGTGAGCAGAAAGTGCTGGAGGCCAACACCAAT
GATGCTTTTGAGTCCATGATCTGGGAAAAGGAGGGGAAGTTTACATTTTTTGATATCGTG
AATGCCACAGACAACTTCAACGAAACCTTCTGCATTGGTAAAGGAGGGTTCGGGACCGTG
TACAGGGCCGAGCTTGCAAGTGGGCAGGTTGTGGCTGTGAAGCGGTTCCATGTCGCTGAG
ACAGGCGACATATCGGATGTTAGCAAAAAGAGCTTTGAGAATGAGATCAAAGCACTTACA
GAGATCCGCCACCGGAATATCGTCAAGCTCCATGGCTTCTGCACTAGCGGTGACTACATG
TACCTGGTGTACGAGTACCTGGAAAGGGGCAGTTTGGCGAAGACATTGTATGGGGAGGAA
GGGAAGAGGAAGCTGGACTGGGACGTGAGGATGAAGGTGATACAGGGGGTCGCTCATGCC
CTGGCCTACTTGCATCATGACTGCAACCCGCCCATCGTTCATCGTGACATCACTTTGAAT
AATATCCTGCTCGAGTCTGACTTTGAGCCACGGTTGTGTGATTTTGGCACCGCAAAGTTG
CTTGGGTCTGCTTCGACAAACTGGACTTCAGTGGCAGGATCGTATGGCTACATGGCTCCA
GGTACACATCTTACGCGTACAATATATGACTTTTCAGTGAGACATATAAATAGACTTTTT
ATTAATTATTCGGTTAACAGTAAGCTCTGTTAAAAAAACTTGAATAATACGAAGATCCCT
ACTGGTGCTGGAGAATATTATGAGACATTATTTTAGATATTTCTATTCACTCTTTGTGAG
AACCTAGTGAATCAAAGGCGCTTCTATCCTAGTTGAATAATTGCGGTCAAAGCTCTAAGT
ACTCAGAAGTAGTTGCCGCAGCCTTGCTAATATGTGTATTTGGATCAGTGTCATTCGAAA
TGCTCAAATTCCACAAAATTCGGACACCTACTTAGCAATGTCATATTAGAGCAGCATAAT
AACATATGACGGCTCTCGTTGTTTTCTTGCAGAATTTGCGTACACAATGAGGGTGACAGA
GAAGTGTGATGTTTACAGCTTCGGTGTTGTTGCACTGGAGGTCCTGATGGGGAAGCACCC
AGGTGACTTGCTAACCTCTCTGCCGGCGATATCCTCATCACAAGAAGACGATTTACTCCT
CAAGGACATACTGGACCAGCGGTTGGATCCTCCAACGGAACAGCTTGCAGAAGAGGTTGT
GTTCATCGTCAGGATAGCGCTTGCCTGCACCAGGGTAAATCCTGAATCAAGGCCTGCAAT
GCGATCTGTAGCACAAGAGATATCAGCACATACCCAGGCCTACCTCTCTGAAGCATTCAG
ACTCATCACAATAAGCAAACTAACAGACTACCAGAAGTGATGCACCTTTGAGCAGAGATT
CTGAATCTACACAGGCAGGTGAAAATTGCAGACTTATTAATTCTGTAAAATACAGTTTCA
AATCCTCAAGTACTTTGTGTGTCAGTTTGCCTGCCAAAGACCAGCATTAGGAGAGCATAT
TGCGATAACTCTGATAAAATAGATAGCTAAGCTATCCTGAAGATTGTCTGACTGTGAAAC
AATGTCGGCGGTGATGTTTGTATTTCTCATTATTCTACTCCCTAAATAACTAAATACAAG
ACGTTTTTGCAGCTCAATTTGAACTGTAAAACGTCCTATATTTAGTTACAGAGGTAGTAT
TAAGGGCTAAGCAGTAAGTTGTAACTGTAAGATAGACAATAAAAAAGCAATAAGTGTTAT
GTCTCTGGAAATGGATAAGAATATCTTGTCCAAATAGACAATGGATGTATTTGTGTGATA
AATCTTTTTAGCTTCCTAAAGAATAATCGTTTATTGTGATATTGGAGTAAGAAAATCACT
GATTAAAAAGTGTTGTGAAAAGTGATCCCATGCCACAACTTAGAGTTACCTAGATTCAGG
AAAACAATCTCTTGCTTACCCCAAGAGATTCACACCATAGTAGCAACTTCTGCAACCCTC
GCTGTTATTGACCAATCGTTCATCTCCATCCACCCATCTATGGTCTCCTCGATCGTTTGA
TTGACAAATCAGAAGAGGCCTGGTATCCAGGATTTGTCAATCTCTTTTGATTTGTGGCAC
GAGCTGTGGCGTCGCTGCAAAGAAGCTGCACGGCAGCTTGATTTGTGGTACTCCCTTATC
GATCGTTTCTAGTGCTTCATGGAGAACTACGCGATGCCTTGGAGAGTACAGCCACCTCCA
TCTTGGCCATCTTGACGAAAAAAATCTGCGCGGCGAGCAAAAAGCCCGCGGCTAGGAGCC
ACGGAGGAAACGCGTCGTAGGACGTCGTTGATCATGGAGATCCATGTGTCTCATACTCAC
TCTTCAGATGCAGGGGTTGAGGATAATCCTTTTTTTCCAACAGAAAAAGTATCGCAGACT
CGCAGTCCGGCGGGGTTGGGGCATCGGCAACCGTCGGATAGTGAACGTGATTTGCCATCC
ACCACGTGGACCGGTTTGGATGTGTTTTTTTCCCGGAAAACAAACTGGGGTGCTTTGCGG
TATTCGTACCGATGCCACGCAAACTTCTGGCAGACGTGGCCTATCCAAAAAAACCTCGTC
CATGCCATTTTCCGTCCGAAACCGCGGATTTTTTCACTGTTTTCATCCGTAAGGCGTAAG
TTCATCGGATGTTTTCACTGTTTTGATCCGTAAGGCGTAAGTTCATCATGTAACGAACTC
GATTCGAAAGTATTTCACGTTTTGACCTTTTTGAAAACGCCACGTTCCGTGACGTTGCAG
CCCTGTTATGAAACGCCAGTCTACTGGACGTTGCGGGCCTCGTGTGCAACGCCAGTTTAC
TGGACGTTGCGGCCCTTC