Contig Data
morexGenes
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Map Locations of contig_56661 (3508 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_56661

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69596 2 1700 bp AK363823 Available Available None
MLOC_69597 1 1041 bp None Available Available None





CDS Structure of MLOC_69596






CDS Structure of MLOC_69597






Contig Sequence (3508 bp)

>contig_56661 3508 assembly3_WGSMorex_rbca.fasta
GTGGCGCGCCGCCGCGTCTGGGCTGTGGAACGGTGCCGGCGGTCTCGGCCTGCGCCGGTT
CCTCGCCGCCGGGCTCGCGTCAGCCGCCCGCCTCGCCGCGCTTGCCGCCGACCGCCGCGC
CGAGGTGACGTCGCTCGTCCAGAACCTGCTCGACGACACCAGCGCAAGCGCCATTGGTGG
GGTTATTACCCTCCGGAACAGGCTGTTCGAGCTGGTGCTCAACGTGATGCTGCACGCGCT
CACCACGCGCCGGCACACCGGCGACTTGCGCAGATTCCAGGAGATTGTGGAGGAATCATT
CGTGGTGAGCGGCACGCCGAGCATCGGGGACTTCTTCCCGGCGCTGCGGTGGGTCGACCG
TCTCCGCGGCGTCGAGGCGGCGCTTGCAAGCCTGCAGACAAGGCGTGACGCGTTCGTTGC
TGGCCTCATCAATAACTGCCGGGAAATGCGTAACGCCGGTGGCGGAGACGTGGGGAAGAA
GGGCGTAATCGACGTGCTCTTGGATCACCAAGAAACCGATCCTGGGTATTACACCGACAC
CGTCATCAAAGGCATCGTCTTGGTGAGCAGTAGCATATTGTGCAAACTGCATCCGTGACA
CCACCACCACCATGTGTGCTACTCTATTTGGTGATCTGTGACAACTGGTTGCCATGTGCC
CATGTCCATGCTGACATTCAGGTAATGCTCACCGCCGGCACCGATACGTCGGCGCTGACC
ACCGAGTGGGCGATGGCGCTGCTGCTGAAGCACCCAAAGGCGATGGCGAAGGCGAGGGCC
GAGATAGACGCCATTGTCGGCATGAGCCGGCTGGTTGAGGAGTCGGACATCACCAACCTA
CCTTACCTGCAATGCGTTGTCAAGGAGACCCTTCGACTCTGCCCTGTCGGCCCGGTCATC
CCAGCACATGAGGCCATGGAGGACTGCACGGTGGGTGGCTTTCATGTCCAGCGCGGCACG
ATGATCCTCGTGAACGCATGGGCGATACACCGGGACGCCAATGTCTGGGATGCACCAGAG
GAGTTCAGGGCAGAGAGGTTCTTGGGCAGAGACGCGGTCGCCATGCCCATGCTGCCGTTC
GGGCTTGGCAGGAGGCGGTGCCCCGGTGAGGGCCTGGCGATGCGCGTCGTAAGCTTGACA
CTGGCAGCACTCCTGCAGTGCTTTGAGTGGGATGTTGGTGATGGCGACACCATCGACATG
GCTGAAGGTGGTGGACTGACAATGCCAATGGCGACGCCATTGGCGGCTGTCTGTCGGCCC
CGGGAATTTGTCAAGAGTGTGCTCTCTGCCTCCACTTCATGGACATAAAGACAGGTTTCT
AAAGAAAGAGAAGAAACTGGATTAAACTTGTTTAGCAATGGTGCCAATGAATCTTGAGAT
AAATACTTCAGCAAGATTCCATTAGATGATGCTGAACATTACAATATCAGACGATTGTAA
AACTAATTTCAGTGAATGGGTGTTGGGCAATAAACCAAAAACTGTTTAATAGAACAGCAA
TAATTTTGTTGATGGATTTATTCCAGTCTATACTCTGCATTTCTCTGTGCATTGGAGACT
AGAAACCGCTCAAAGATTTCCCAGGTACTTGTGCAGGGTAGCAGCTATATGCAGTGCCTA
CAATGAAAGGCCGGCAGAATCAACAACCAAATTAGGCCGGCAGAATCAACAACCAAATTT
TACAACAAAGGAAAACACCGTGCAAAATGAGAAATGCTTAATTGGATAGTGAGACGTCCA
GCACTTGAGATTCCAACAGCAGGAAAACCTTCTGTCCTTCTGGTCCAGAGATTGAGAAAA
TCTTTGTGGGTGTCAATTCTCTGGTTCAAATATCAATCTATCCGTTTAAGAGATTAACCT
GGCAGTGCTGGTTAACATTAGCTTTCTGGTTATGAGAATTTTCTGATTTTTTTAGAAAAG
GAGAATTACCTGTGATCTCTGCATCAACACGATGCATACGATCCCTTTATTAAAAAAATA
AAAAACAAATCGCGGTTCAACATAGTCTTCGACATAGCAATATCTCTACTCCTAAAAGGG
TAGTTGGTAGCCCGCGCTCATCGATCTTTTTTTCGTCCACCACTTTTTGGTTTTTTTTCG
TCGTCGTCCCATCAAAGAAAACCAGCACCGTTCCTTCCCTGGCCACGCCCGTCCTGATTT
ATTCCAGTAACCCAGCTAGGGTTCTCTCACCCGCCGCCATTTCGCTGATGCCACCCCGCT
ACCCGATGCCCTCCATGGACGCCACCACCACGATGGCGCAAGGAAGAACAAAAGGGTGAT
CGTCGAGGTTGGGCGCCGCCGTGAGGGTAATCTCCCTTTCCCTTCCTCCCGAGAGCAATC
TCCCTTTGCCCCGCCGCCGCCTCTCTCCGTCGATCCATGTGGCTATGGCGGGCCAAAGTT
GCTGGAGATGCGCGACATGAAGGATCTTCCGTCATCGCGCCACCCATCGCCTCCACCTTC
CATCACAGATGGTCGTCTTCATCCGATGGAGCCATGAGCTCGACGCCCAACCCCACATGC
CCCAACCTCCGCTCCATCCCACACGACGTCGGGCCGCCGGGTCGACCGTCTACGCCCGTG
TCGCGTCGCCTGAACCCTATCCCAGCCCCGCCGGGCTCATGCACGACGCCGAGGGGGACG
GGGATCTGGACGACGACGGAAACCATTCGTGCGATGCCGTCGCGGATCTCCTTGGCAGCG
ACGAGGGGCTAGAGGAGCAGCCGTAGGGGTAGAAAGGTGGAGCGCCGTCGAGTTCAAAGA
GCAGACGTCGTGGAGGACTCTAGGTCGTCGTCGTGACACCGCTGCCGAGGTCCACCATCG
CCACCATCAATTTCCAAGAGGGGCATCACCGCAGGCCTCTTTGACTGCAGCCAGAGCTCG
ATGGCCGGGGCAAGGCGTTAGTCTCGGCCGGGATCCGCCGCTGCCCGTCGTCTTCACCGT
TCGACAGTTCTCTGCTCCCCCGATCCCACTACCCTCCATGGCGTCGTCTCTGCATCGCCA
TTCATCGTTGAAGATCGCCCGCCTCTCTTGCGCGGGATCGACGCGATTGCCACCAGGAAA
GGCATCATCGCTGCTGTCGTGCAAGGTAACTGGCCACCTCCTCTCTTTTTTAGTAATTGT
ACGGTGTACTCCATGGCATACTAATAACTGTTTCTCCTCAATCCACGCTCGCCTCAACAC
TACTACCATAATATTTGGTCATTACTCAATTTGCTCGAGGAGGCTAGCTGGGCGAATTAT
TATACATATTATATGTTGAGCAGGCTGCAGGAAGATTGTCCACCACTTCTACATTCTGGG
ATTCCTCTCATAATCTATTTCGAGTGGTTCCCATAAGGCCATAGGCCCATTCCTCGCCAA
GGTAACCGGTAATCACAGCCGGTCCTAATTATTCCCAGACATCAGTAAAGATTGATGTTA
TCTATTTAATAAGTTGTATGTGTTTCTCTTACCTGCATTTTTGTCTCCTTTTAGTTTATG
GCATTGATGTGTGAATCAAGTTCAGGAT