Contig Data
morexGenes
Links



Map Locations of contig_56628 (5991 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56628

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69571 1 1627 bp AK364109 Available Available None





CDS Structure of MLOC_69571






Contig Sequence (5991 bp)

>contig_56628 5991 assembly3_WGSMorex_rbca.fasta
CTTGACGATCCACGGGATCTATCACATCATACATAGAGGTCATGGCAATAATATGCGAGT
GATTAATATAACACGTGTATGAATCTAAACTGCGGTTTAGTATTACAAAGAGATGAAGAA
CGTGTTGGTGAAGAAGATGTGGGTGATGATAATGATGATGACGAAGATCGATAGCAGAGC
CTCCTTCATCGGGTTGATGGCGTAAGTGGTGGTAGACGGCCATTTGTCAATTTTCCCTTC
GGATCCCTTCAGGAGGTCAGGTTTCTTGGTTCTGGAGCGTGTTTCTATTTTCGCCATTCC
TGGCCCGCGAGATTCGAAGGACGGGGTTGAAGAACTCAACAAGGGAGGTTGCAAGACATT
GGAGACCGAGGCTGAAGACTCTTTGCTGAGCACTTCTTTTTGTTTGTAGTACTAGTAGTA
GTTAGTTCACTTCAGAGAGGGGCATGGTGGGTGGGAGCGCTATCAACAGTTTGCGCGCAA
ATCGTGAAGGGCACGTTACTACTGATAAGGCGGATGCAAATGTGATGGTTCCAGAGAGAT
AAATTTCCTAATAAATTTGTAGATATGGGCGCGGTTTTCTGTGTGGAAGGATTTTGCTGA
ATTCATCATCTGCAAATATCGAACTTGACAAGACACATCTTGCGTGCTTGTTTGCGAATC
ACAGCTGACTGAATTCAGTACCACTTTGCTTGGCATCCTTGTTTTTTCGTAACACAACTG
GCTGAACCCAATTGCTCAATTGCGTGGTCCAAAATCACAGCATTGAAACTATGCAGCTCT
AGCAGTAAGAGCATCATATAATGCCCCAACCTGTAAAACAAAATAAGGGCTTGTGTAAAA
AATGATGTCAGATCAGACCTCGCAAACGTGTCTGATCCGTAAACATTTTTTAGGGGCGCG
GCAAAATCCCCTCCCCGATCCACAAAAACACATATTTTCGCCTCGCATATACGATGCCCT
GTATCCCACGGAAGCGGTTGGCGAGCCGAACATTTCAACCCATGCCCTTTTTCCACACCC
TTCCACCGCCGCGCCGTTATTGGTTCCACCAGTTCGCTGCCGGCTATTCCGCCAAATATG
CAGGGTGAATCGCGCCGCAGTGGCGCCCCTGTCCTCTTTCGCCGAGCCGCTTCACCGGCT
TCCCCGAATTGGCCAATCCACCTTGGTGGGAGAGCCACCGTCGGAGATGGATTTGAGCCT
GTGCGAGAAGTTTCTGCTCGAGGATTCATCCATTCGGATGACTCGGATGTTGAGACGATG
CTTCAAACATTTTGCCAGCAGAGTTTGTGATGGCCCTTGCCGTGAAGGAGCACGAAGACG
AGCACCGAAAGAGGTGGCGAGGGTCAATTGTTCGGGGTCTCTGCATTTCTCGAAATCGCC
ATCTCGGGAACGAGATGCTGATGCGAGACTACTTCGCCGCCAATCCAACATACCCGTCAC
ACCTCTTCCGGAGAAGGTACCGTATGCGCAGATCCCTCTTTGTTAAAATTGTTCAAGCTT
GCGAGGCGAATTGTCGATATTTTACTCAAAGAAGGAATGTCGCGGGCTTAAAGGGATTTA
GTGCATATCAAAAAATCTCGACAGCTATGCGGGTAATTTCATACGCGTTCCGCCTGACTA
TACCGATGAGTACCTTCGCATTGGGAAAGATAGTACAATTGAGTGAGTGAGTAGGTTTGC
CAAAGTGGTCATCCGTGTCTTTGGTCCTGAATATCTTCGGGCACCGANNNAGGAAGACAC
AAAAAAATTGATGGCGTTTAATGAAAGAAGAGGTTGTCCTGCATGCTGGGAAGCATAGAT
TGTATGCGTTGAACTTGGAAAAATTGTCCAAAAGCATGGCAGGGAATGTACCGTGGCAAG
TCTCGTGATGTAACAATTGTGCTAGAGGTCGTAGCTTCACATGATTTATGAATTTGGCAT
TTCTTTTTTTGGTATGTCGGGTACTCTAAATGTTATTAATGTGTTGCAACGGTCTCATTT
GCAATCTAGGCTTGTTAGTGGTGATGCTCCAGCTTGTAACTACACTATGAATGGGCATGA
GTACACAAAAGGATACTATCTTGTAGATGGTATATACCCTTCTTGATGCACATTTGTGAA
GAACATCGAAGACCCCCAAAGTAGGAAAGAGTCTGAATTCGCAAGGGCACAAGAGGCAGC
CTGAAAATACATTGGAAGAGCATTTGGGGTTTTGCAATCTAGGCTTGCCATTGTTCGTGG
TCCTGCTCGGTTTAGGGACCAACGATCCTTAAAAACATCATAACATGTTGTGTTATTCTT
CACAATATGATTCTCGAAGATGAGAGAGGCATGAACTTGGAGTTCTTCTATGACAATGTT
GGCAGTCGTGTCAAACCAGCTAGAGACCCTGACCGAATTAGAGTTTTTCTTCAGACCTAT
GGGGAGATTGAAAATGCAAACACCCATTGTCAACTTCAGAAGGATCTCATTGAGCACCAT
TGGCAAAGGGCTGGGCAGTAACACATTTCATTTTTTCATTCATGTGTGATTTGTATACCG
GACAAGTTTTGTATTCATGTGTGACATTCATTTAGTTTGCTCCAGTGATTTGAATAATTA
TTGTACTTTGAATGATTACTGTATTTGTAATATTAACATTTTACTTATATTACACATGAT
GAGTAATTTCGATTTACGGGGTATTCGGTTTGCGGGGTCGATGCGGTGCCGCCCGAGCAG
ACCCCGCATTACCGACCCGTAAAAAACATCTTCTACGAATATCTTTTTTACGGGTTTATT
TTGGGGGATTTCACATCCGCATCGGCCCGCAAAATCCTCTTTTTGCGAACTGTAAACACC
TTTTACGGATTGACTATATGTGGGGTCTGCTAGAGATGCTTTGATGTTTCTTTGCGGCAA
TGGACTCTTGCACTAATGAACAGTTCTTTCTTTGAGAATTAGTAATAATGTAAGTTTTTT
TTTAACTAAAGTAATAATGTAAGCGGTCTGTAGGCCAAGCTAGACGGGCTTGATTTTCGC
TGGAGAGAAAAGTAGCAAGCTGGGCCCTTCGGTTGGACGGGGTCCGAGGGTGGGAGTCAA
GATCGGCGGCGAGAAGATGCACGGCCTGAAGGAAGAAGTAAAATGCATGCTTGGCTGTAG
CAAACGCCTCGCACAAATGCACGATATGTTTCATGCAGGATCTAAAAGTATCCATAAACT
TGGTCAATTGTGTACAAAGTTTGATTAAATTTTGGATCCATGGACGAATGGACCCGTTGT
CTAATACGCTGATATTGTGTCATCCTGAACCGGGTGAAACATCTTTATTGTGTCACAGGA
TGAATGTACTTTCCCGTGCGCATACAACACGACATCACGCCTTGTGCGTGGCATCAACGT
CGGAGACACAAGGGTGCGAAAGCCGGGGCGTTGGCACGGCGCAGAGCCTGGTGGCGCGCG
GCGCGGTGAGTCCGAAGATGTCGGTCATGTCGAGCTCCGACGGCTTCATGCCATCGGGCA
GCGCCCAGTTGAACCCGTGGGCGAGTTGGGCGACAGCAAATTCCAATGAGTAGATGCCAA
GCGCCATCCCAGGGCACGAGCGGCGGCCAGACCCGAACGGCAGGAACTCGAAGCAGTTGC
CCTTGAAATCCACCTTTGCGGCCTCTCCTTCCACTGCCATAAACCTCGATGGTCGGAACA
TGTCGGCGTCCTTCCACACCTTGGCGTTTCGACCAATGTCGAAGACGTTGATCATGATAC
TTGAGCCCTGGGGTACTGAATAGCCACCGACCACACAATCCTTAGCGTTCTCGTGGTGGA
GAATCGGGATGGGCGGGTGTAGTCGAAGCGTCTCCTTGATTACGCACTTGAGGAAGGGGA
GCTTGTCGAGGTCCGACTCATCCACGTTCCGGTCAAGACCCACCACGTCGGCAAGCTCCT
CCTGCAGCCGACGAAGCTCATTGGGGCTGTGCATCATCTCTGCCATTGCCCACTCAATCC
CGGATGCCACCGTCTCCGTCCCACCAAACATCACGTCCTGCCAAGCCACATTATATCAGT
TTATTTCACGTGCATATACACAAAAGCAAAAACAGATCATTCTCATGTGACATAAGTATA
TACTTGCGGTGTATACAATGCGATCACACACAAAGTCATGCTAACAGTGTAGGAAGACCG
GACTCGTAATATATTTTAAAAATAAGAAAACTTGCATATTTTATGAATTACTTGTGTGAC
TTTGAAACATATTTTGATATCATATAAAAATGTCCATGTAATAAAAATTTGTTCATGTTT
CTTTTAAATATTGATGCAATTTTAAGAATATCAAAGTCTTTAAAAACCGTCCTGCAATTT
TAAAAATAATTAGATGTTTTAGAATATTCATGCAGTTTCAAGTAAATTTAAAAAGTGTTC
CAATATTTATAAATAAAATTTGTAAGTTTAGAATGTTCATGTTTATTTATTAAATGATAA
TGAATTTTAGAAAGTATTAATGTATTTCATAAAATGCTTTTTTGTTTTTATAAAAATTAT
TGTTTTTCTTTTTAGAAATGAAACATCGAAAGCAAAGTAATAAAACTATGAAAAAAATAC
GAATAATAAACTACTCCCTCGGTCCTATATCAGTATAAAAAGAGCTCTTATATTATGGGA
CAAACGAGTAATAGGTTGAAAAATAATGATCTGAAAATCCCCATAGCTATATGTGCATCT
TCAACAGGAAGGAATAGGGACCACTAGAGCCTAACTAAGCGGGGATGTTCTCAAACTTCA
CTTCTTTTTTTTCTTCTTCCCTTTCTCCTGGTTACTTCTGTACTTTTCTTCTATCTACCC
CAATGGAAATAAGTCATTTTTGTCAAAAAAAAAAGGGACTGAAAGAAAACAAGAATCGAA
AGTCTACTTGTAGAAAAAACTATTTTCAGAATATTCAACAATCATAAGAAACACTAAGAA
ACAAAAATATTATCTTCAGAAAAAGAAATAATAACATTAGTACTAAAAAATTCAGAGAGA
AAAAATGCATGCAACCTTGAAAAGAAGAACACAAGAACAGAAAAATAAAGAAAATAGCCG
CGCAAACCAAAAAAAAATTGACAACTAAAGAGTTGACTTAGACCTAATAATATTAGTCCC
TCCGTATCATAATATATTATGATAAGGTACTAGTTCCTTAAAAAAAAGTACTATTACGAA
ACTAGTAATGGAATTTTTGGTGTCCTTACCATGATCATGGCTTTGATGTTGTCACGGGTG
AGGCGGAGCGTGTTCTGCAGGTCGTCGCCATCGGCCTTCTTCGGCTTCGCCTCAGAGAGG
AACGCGAGCATGTCGTCCACCATGTCGGCGTCCACGTCGTCCGGGTTCTTTCCTCTCTCC
ATGTGCTCGTCTATGATCTTGTCGATGAACTCATCGAGGGCGGCGCGCGCGGCGCGGGCG
CGCACGTTGGTGCCCTGGTCCGCCCAGCCGAGCCACGGGATGAAGTCGCCGAGGCTGAAT
GCCGCGAAGAGATGGGAGAACTCCTGCATGATGGCGATGAACTCGTCCCGTTTCCCGGCA
TCGCCGGCGGCGTCGGCGCCGAACGCGGCCCGGAAGGTGACGTTCTTGGTGAGGTTGAAG
ATGAGCTCGCCGAGGTTCACGGACTCGCCGGTCTGCCGGGCCACGGCGCGGACGAGCGCC
GCGGACTCGTCGCGCACGGCGAGCCAGGTCCCCGCGCGGCGCCGGCTGAAGAGCTTCATC
ACGCAGAGCTTGCGCATCTGGCGCCAGAAGGGCCCGTAGTGCGCGAACGCCATGTCGGCG
CGGTCGTAGGTGAGGTATATGGCGGCGATGGTAGCCGGCCGGTTCGAGAAGGCGACGTCC
TGCGCCTGCAGCACCTCCTGGGCGTACTCCGGCGTCGACAGGACGATGGCGTGGACCTTG
CCGAGGCGGATGTGGAAAATGCTGCCGTACTGCTTCGCCAGAGCCGCGAGCCCCCGGTGG
GTCAGCTGGTCCTGGTCCATCGTAAACATGTTGCCGACGATCGGCAGCGGG