Contig Data
morexGenes
Links



Map Locations of contig_56627 (4980 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56627

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69570 2 1289 bp MLOC_69570.1 Available Available LOC_Os01g65370.1, FRAME:-2, EVALUE:7e-89, 13101.m07060 protein MYB family transcription factor, putative





CDS Structure of MLOC_69570






Contig Sequence (4980 bp)

>contig_56627 4980 assembly3_WGSMorex_rbca.fasta
GGGCTTGTGGTCGCCCCTATTTTAAAAACCCCTTATGTGCTCCCGGGTAAACATGGTGCA
AAACCCCCATTTCCCCCCCCCCCCCCCTTTAGCTGATCATGATCCGGACACGTCTTGTGT
CAAATTATTGGCGATCGGGTGCGTGTGCGCGCGCGTACGTACGTGTTTGCAGGCAGCAAG
CAAAGCAAAATGAATGAACGAGAGCATGGTACACCTGGTGGTTCTGGTTGGTGAAGTCGG
CCGGCAGATTCAAATGTCCGACGTGTCGGCACGAACCATGACTCGTGATATGTGCTCTGA
CCTTCTTCTTGTTTTTGGGGGTGATCAGATTGAGTGGCGTCCGGCTTCAAATCTTATCGT
TTCAACCATGATGTCAGATGAAGCAAACGTTGAACTTATTTATATGCCAGCAATTGAATA
GTAGTGTGAAGACGAGGACTCCTTCACCAATCATCGTTGGTTCAGGTGCCACACACCGGA
AACCTCTCACGCGAAACTTCAGTAAAATACTTCAAATTGTGAGAAGAAATGAGGTACGTA
GTGCATGCAAAAATGTGGAAAGCGTAGAAGAACGCACTCGATGACAGGCATATCAAACCA
GAGATTATTTATTGACATTTATATTAAGTCATAATAAAACATAATGTCCACGTCCAACTT
ACCTGCAAGAAACGCCTTTCGTGGTTTGACAGACGGTGATTGTTTTTGTGCAACAAGTGT
CATTAGACAAAAGGAGGAGGAAGGTTCCAATGATAGTTAACTCCCTCCAGGTGTAAAACG
AAAATGGCATTCTACTTGCCAATGACATAATCAACAATACAAATTATAAGCGCTGTTACA
TATATCCACTTGCACCAGAGTCCAAATTAGCTTCCAATTACGCAATTTGTACGATGAGGG
CTGGACCACCATGAAGCTATAAGTTAAATCCACAAAGTTTTCTGGAACTACTCCAAGTGT
CATTTCCACTTGTCCTTTGGCCGCTTTTGAACCCAGCTAGGTTGGTAGGCTAACTTACTA
CCATAACCCACACGACGGCACATTTGCTACCTCATGTCATTTTCACATAAAAATGAGATG
GCCAACTATATTATTTTTCATGCCTCCCTCTATCAACCGATAGATGGTTTTGAAGAGCGT
CTGTCTATTTTTAAAAAGCATATTATTTTTTCATTTACAACTACCAAAGGTAACTAATGA
TTTTCTTTGAAGACATTTGTTTCTCCCAAGAAAAGACCCCGAAATGATTAGGTTTTCCTC
TTTTTCTATCGGCGACGTCATATGTTTGCCATGCCTCCAACAACCTTTGGTCCGACCCTC
CCCCCTCTTCGAGGTAAGTGGGAGATATCTCGCTCTCCTTCTTAAGAGTTTCAACATCTT
TGGTTGGGCAATGTGGTGTCTACAGTGCCCCTTAGTAGGAATAATGTTTCCCACGTTCGA
TCCACGTCCCGTTGACTTGTCTAGCATCGCCATATGGCATGTGGAGGTTTGTCTTCGTCG
GACTAGCGGGATATAGTCGGTGTTAGTCTTTTGGGAACCCGTTTGGATCCGATCCTCCTT
CATCTTCATTCATGTGTTTATAGGTTTGATCCTTCTAATCTAACTCTCTTCATTGGCGAT
GGTTATTACACTGCTGGGATGGTCCTATAGGGCCTTAGGATGATGACTTTTCCAGTGTCT
ACTATAACAAATTTTCCTCACTCCAACGACGAAGGGTCGATGACGGCAGGGTGCCTTCAG
GATCGCTTCAATGATTGTGGTCGTCACTAGGTGGTTCGTGGACATGGTGGTAATTATTAT
TATCTCCTGTGTTCTTTGTACTATCATGATTGATTATGAATACATCGAAAGTTTGTAAAA
AAATAATGATTTTCTTAATTCCATACCTTTTTTACCAAGAGTCCAAAAGATATTAAGTAG
CACATACCCATGTAAAAATATTCTTACAGTCATTGAACATACATTCGAACCCTTAGGGGT
GCCGAAGTGGTCTTACTCTTGCATACCACCATCAAACCGAAGCCATGAGATTTCCTCCCC
CTCCCATTGTTGGAGTCAACCTCCAAGAAGTATAGTAAATCTCTTGTGGCTAACAGCCAA
TTGATTACCGAGTAATGTTAATATCTTCATATCTAGAAATACATGTTTGTAAGATGTGTG
CCGTCAAAGTGTTTTTTCAGTTAACCATATTATGCATATGCTTGGAGATATACAATATAA
ACAAGTACATTCATGTATGCATATTTTAATATTTTGAAAGATGTTGTGATGAAAATTATT
GATTCCTGGTTGACTAAAAAATAGATGAACAAATATTTTGTTTTCACATAAAAAATATAT
AGCCAACTATATATTATTTTTCATGTGTGTCTCTATCAACCGATGGATTGTCATGAAGAG
CGTGTATCCATTTACAAAAAAAAAATACTCTTTCCATTTCTAACTACTTGTAGATAACTA
ACAAATCTTAATTTTGTATTTTTCATGAAAATGAAACTGAATATAAAGGGGGACAAAACA
TGTTATATAATGTTAATGGGACCAAATCACCTAAATCTAAGTAATTTTGTCTGACAATAA
AAGATTAAGAATACATATAGGTTTATTTATGAGAGCATAGGGAGGCCAAGGCCCCTGTCA
GCAGTCCCCTGCCTCCGCCGCTGATACAATATGAACAAAAACAATTCATGTGTGCGTCTT
TTAATATTTTGTAACATATTGTAATGAAAATTATTGATTCCAGCACTGGTGACTACACAA
AATAGATGAAGGAATAATGTGTTGGGTTGATTTCCTCGAGGGCCTAAATAGCATAAGTTC
TCTACCTACCCAAAACACGCCACATGCTCTGTTCTCGCACTATATCCCACATGACACAAA
CAGACGCCCGAATCGGATCCGCAATCAAACAATTCTATCTGCCACTCTTTTCTCACCTGT
GTCTCTCTGTGTTCTTACACTAATTTAATACTCATTTTTTAGCACCCAAGATTTCTTTTT
GAATATTTGTTTTTGCCGCCGCATGAAATTCAAAATTCTATTACTTCTGTCCCAAAATAA
ATAATTCAAAAATAATTTAATTTTATACTAACTTTAATATAAGATTGAGTAATTTTTGAG
TCACTTATTTTGAAATGAAGGAAGTACTATATCCAAGAAGAAATGAATCATAGTATTTGG
GATGAGGCCAAACTTGAGAAATCATAATCCACATCAGCTAATCTCAATTAGAAACTTTTT
TCTCTCTCTTTCCTCCATTTTTGTGCTTTGTACAGAGTTTTTTGGGGGCTGCCTAGTGTG
CTATATGTATTGACCCTCCTCCAGTGGCCGGAGAAACCGGAACACGCGCGGGCCCGCCGG
CGACGCCGTCTTGCAGGTGCATGCCTCCCCGTTGCGGACGCCGAGGTGGTAGCACAGGCA
GATGCCCTGCTGCTGGTGCGACGTGAGCGTGGACCTGGCGGGTGGCGCAGCCTTGGGCGG
CGAGCACGGCAGACTCATGGACAGGTCGAGGTCGAGGTCCAGGTTCAGGTCCGGGCACCG
TGGCGCGTCGCTGCTCCCGCCGCTGCTGCTGTGCCCGTCGTCCGACGGCGAGGGCCTGGC
GAAGCTCACGGTGCTGCCCGGGTAGGAGGCGAAAGGCGCGCTGGCGAGCCTGGACGCCGG
CGCCGGGGAGGAAGGGAAGACGGGGGCGGTGGTCGACGCGGTGAGCCCGCTGGCGGCGGC
GGCGCTGATGGGGCGGTGCGTGTGCGGGTCCATGCCGCGGTTGAGGAGCTTGCGCTTGAT
GTGCGTGTTCCAGTAGTTCTTGATCTCGTTGTCCGTCCGGCCGGGGAGCTGCCCCGCTAT
CAACGACCACCTGCACGACGGCGACCGCTTGCCCCGGTCAATAACTTGCCCGTCGCCTCC
AAGAAACCAGGAAAGGAGAGCGGCGGAGGAGGAGCCGACGCGCATTGGAAACCCTACGAT
CGATCGGGTCGGGTGCTTACTTGTTGCCGAGGAGGGCGTGGAGCTTGATGATGAGCTCGT
CGTCGTCGTCGGTGAAGTTGCCGCGCTTGAGGTCAGGGCGGAGGTAGTTCATCCAGCGGA
GGCGGCAGCTCTTGCCGCAGCGGAGGAGGCCGGCGGCCTTGGGCAGCGAGCGCCAGCAGC
CCTCGCCGTGGGCCTTGATGTAGCCGATCAGGCGCTGGTCCTCCTCCTTGGTCCAAGCCC
CCTTGTTGGTGTGCGCCTTCTCGCAGCACGGCGACCTCCCCATGCCGATGACGACGCCGG
CTATGGCGGCCCTGCTCGGAGTTTGAGCTCGCGGTTGTGTGCGGCAGGGGAGGGGTGAGG
AGAGGTGTGGTGGCCGCGCCGTGGAGGGCAGAGGCGTGCGTATATATGGGGGGCGTGACG
GCGAGAGCAGAGGGGGTGGGAGCTTTTTGGTGATTCTTTTGCTGGGTGTTGGTGGTGGTT
TCTCGCTCCATTGACCCGATCCTCCTGGTTTGGGGTTTGACTGCCTGCGCGGGCGCGAGG
TGCGTGCGGGTTTGGGTTTGGGTTGGGTTGGGTTTGGGTGGGCGTCGCAGGATGCTTGTG
ATCAGTGAGCGAGAAAGTAAAGATGTGGGCGCGGCGCAGCTAACGTGTTTGATTCCTTGT
TGTACTTGCTTGACTGGAGTAGCTTTGGTTCGGTGGCTGCACAACGGGTCTGCCTTTCAA
AGTGAGAGCATTAGGCCAACTCCATTGCACGACCCCATCTTATCCGTGCGCGTTTGTTTG
GGATAGAACGAACGAATACCGCGGGATAAGACGCGGACCCAAACGGACAAATGTCCGGAT
TTTATCCGTTTTCGACCCATTCCCGGCCCAAACTTGCGTCCAGTTTGGGAGAAACGGACA
TCGCGCGGAAGCGCTCGCCGCACGCCCTTGCCCGCCCGTGGCCCGCGTGTCGGGGATACA
AGTACTCCCAGAAATTCCAACGCCTCCACCCCCTCTCCCGCCCCGCCCCGCCGACGGTGC