Contig Data
morexGenes
Links



Map Locations of contig_56539 (2708 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_56539

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69515 1 1411 bp MLOC_69515.1 Available Available LOC_Os01g73220.1, FRAME:+1, EVALUE:2e-157, 13101.m07991 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_69515






Contig Sequence (2708 bp)

>contig_56539 2708 assembly3_WGSMorex_rbca.fasta
AAGGCGTACGTTACTGATAACGTACGGAATTAATGTTACTTATGACGACCAGCCGAACGC
TCGCCTGTCGGCCTCCCTGGAGTGGTTTCAGGTCTTTTGCGTCGACTGGTTTCTGGCTCT
TCCGAGTGTAAGTTGATTGTCGAGTGAAGGGGGAAAATTCTTCGAGTGATTGGTTACCGA
GTGACTCAAACGCTATGGCTCTTCAGTCGGAGCCCTCCTTGTAGTCTTCAAGTCTTTAAT
GAGGTGCCCTTAGGTAGGACATGTAGGTCAGGACTATGGCGCTATCCTAGATACATATCC
CCATCAGAGACAGCATCCCAGAGTCACAAATTCTCGTCCTATGCATATGCTACTAGTTTA
AGTTATTATATGCATAGTAAATAGTAACATCTGTCTAAGTTGTTGTCTGCTAATCTAAGT
TATTATTTGAGTAAATAATAAGATGGAGTAGAAGTTTTCATTTATTAGCATGTAGGCTCT
TCTTGTCTTTTATGTGTGATCTTACTTATATAGTATTACCTCTGTCACGGTTTAGAAGGC
ATGATTAAATTTACATGCATTTTCACAATAGACAAGGTTTAAGATCCATTGCATTTACTC
CTAATAGCTAATTAGTACTTCGTTGTGCTACTTATATATGCATGCGTAGTGTGAATGCTA
TTTTTCAACTCATTTCACAGCCAACCAATAACCACCTAGGTTCTAGAAAATTTACATGCA
CGCCTTCTAAATCAAGACGGAGGAAGTATGAGTAACTAGTTATGTTATTCAATTTGTAAC
TTTCCTCATTAATTAGCTGCTACATTATTTTTGTTTTTTCTTAGATGACATATGTGTTAC
TTTCATTGTGGATAGCCTAAGCAATTTCGTCGATAGATGGAGGTGCCGTGCGTAGCGCAT
GGTTTTCACTCAAAATCATGTATGACAGCGCCTCTGTTGGTGTTACTCTATGGCGTGATG
ACCTTCGTGTGTATAGTAAGCAACCTAAAGACATGGCAAGATTGGCGCCTTGGCAATGCC
ATGTCACCTATCCCAATCCTTAGACATGCGGTTAAGCCTCGACTCTGGCGCCTAGCTATA
CCTAGCCTCACTTTAGTTTGTTGGAACTACTTGACATCAGACACTTGTCGATCCTTTTGT
AAGTTGAAGCGACGAGTAATCAAGTGCTGTGCTACACGGCCACTCATGAATCTTTCCTAC
AAATTGAGGTCCTGATCAGCAGCGTGGACAGAAAGCCGTAGCAGCCCGGTCACACACAAA
GGAGAGAGGAGATGGCTCGTGTTCCTCTGCTAGCAGCACTTGTGGTGGCAATGGCGGTGT
TGGTGGCCAGCTCGCTTGGACCTAGGGCTTCTGCGGCCGAGCCACCGGTGGCGCCCGGCC
TGTCGTTCGACTTCTACTGGCAGACGTGCCCGCGGGCGGAGTCCATCGTGCGCGAGTTCG
TCCAGGAGGCCGTGCGCAAGGACATCGGCCTCGCCGCGGGCCTCCTTCGACTCCACTTCC
ACGACTGCTTCGTGCAGGGCTGCGACGCCTCCGTGCTGCTCGACGGCTCGGCCACGGGGC
CGGGGGAGCAGCAGGCGCCGCCCAACCTCACGCTCCGCCCCTCCGCCTTCAAGGCCGTCA
ACGACATCCGGGACCGGCTGGAGCGCGAGTGCCGCGGCGCCGTCGTCTCCTGCTCCGACA
TCCTGGCCCTCGCCGCCCGTGACTCCGTGGTCGTCTCTGGCGGGCCTGACTACCGCGTGC
CCCTCGGCCGCCGCGACAGCCGCAGCTTCGCTTCGACGCAGGACGTCCTGTCCGACCTGC
CGGGGCCCTCCTCGAACGTGCAGTCCCTCCTCGCCCTGCTCGGCCGCCTCGGCCTCGACG
CCACCGACCTCGTGACGATCTCCGGCGGCCACACCATCGGGCTGGCGCACTGCAGCTCCT
TCGAGGACAGACTCTTCCCGCGCCCCGACCCCACCATAAGCCCCACCTTCCTCTCGAGGC
TGAAGAGGACGTGCCCGGCCAAGGGCACCGACCGCCGCACCGTGCTGGACGTGCGCACAC
CCAACGTGTTCGACAACAAGTACTACATAGACCTGGTGAACCGGGAGGGGCTCTTCGTCT
CCGACCAGGACCTCTTCACCAACGCCATCACCCGGCCAATAGTCGAGCGCTTTGCGCAGA
GCCAGCAGGACTTCTTCGAGCAGTTCGGCGTGTCCATTGGTAAGATGGGGCAGATGAGGG
TCCGCACCAGCGACCAGGGCGAGGTCCGCCGGAACTGCTCCGTCCGCAACCCTGGCCCCG
GCGCCGACGCGCTCCAGTTGCCGTCCCTTGTGCAGACCATTGTCGACGAAGCCGCAGGAA
GCATTGGCTAGCTTCTACAGTAGCATCTAGATCAGTGGACTAGTAGCTGTTAATCATGTC
GAATTAATAAAAGGTGAAGAAACTGGATATCATTTTCAGCTGTCATATTATATACTGTCT
GTTTACTCCCACATCGGTTGTGGAAGAAGACATAACACGACTTATAAGGGTGAGGGTGTC
CCTCCTAACAGACTAGTCTTTTGGGAGGAGAGGGCCCAAGGCCTGTCATAAGTCGGTGTT
ACTCTCTGGTTGGGCCTGTTGACGCATCTGGGTCAGAACCACTGGTGTTAGCGGACCCGG
GATTGCGCACATGTGTAGGGTGCCGTCCCGTGCCCGCCCTCACCGTTGTCGATCGCCCCG
CGCCGATC