Contig Data
morexGenes
Links



Map Locations of contig_56519 (3100 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56519

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69498 1 1386 bp MLOC_69498.1 Available Available LOC_Os01g52240.1, FRAME:-3, EVALUE:1e-163, 13101.m05463 protein chlorophyll A-B binding protein, putative, expressed





CDS Structure of MLOC_69498






Contig Sequence (3100 bp)

>contig_56519 3100 assembly3_WGSMorex_rbca.fasta
TCTCTACGAGGTCTTATATTTAGGAACGGAGGGAGTACCACATACCAAACGTGGGATTGG
GACTAATAATCTACTTCCCAAGTCTAATTTCTTCACAAATTCCCCCTCATAAACTCCCAT
GCCCAATCCCTCAAGATGCCAAACACGCTGCAAGTATTATCAGCGGTTGGGCTAAAGAGT
TGACCGTTGCTGGATTGATTTGTCGTAGAAGGATCGGTCCATAATTATCGTGTGTAGAGC
AGTTTTTTGGTATAACAATCGAACCCAAAGCACCGTATGTGGAGTTGGGAGTAATTCCCG
CTGTACCCAGTAATGCAGTTAACGAGCAAATGGTGGTTTGTCACACTCTTGGCACAAAAA
TTATAACTAGATTTTTTTTTTTACCTTCATCGGCTAACTGGAGTACAGCTAAAGTGAGAA
AGATTTTTTTTTTTTTGAGGGAAAGCCTTCAGGGCGCACTTTATTTCATCATGAACAAGA
ATACATAGTTCATTACATCGCTGACAATGAAACTAGGGGGGGTCACCATCCCAAACTACT
GAATTATTTGACTCTACACTGTCCACGGGAGGCAAATTATGTGGCTAAAGTGGGAAAGCT
GATAGCTAACGGAACATACAATTAAGGGAGCGCCGTCAGGTACCTGAAAAATTCATCTAA
GTCCGTCACCATTCAGAACCACACTAGATCTTCATCCAACGATAAAAAAAATACTTCCTC
CGTTCTTAAATATAATAAGTCTTTCTAAATTTTTTTCCTAGAAGACTACATGTAGAGCAA
AATAAGTGAATCTACATTCTAATATATGTCTATATACATTCGTTTGTAGTTTTCTAATGA
AAGCTCTTAAAAGACTTATATTTAAAAACGAAGGAAGTAGATCGCATATTGCTTAGCTTC
CTCTTGCAGCTGCCCCTCCAACCTAGCCCTAACGGCGTGCTTTCAACCCCCATGGCCAAT
GGGTGCTGTCATGCACCGCCTCAACCTCCCTCGGCAATCTCTTTGAGCCCCACCCCAATG
AGCAACTCTGATGGCGCGCCCCTTCCCCCATCCCCAACATGTACTCGTAAAGTTTCGGAC
TTCCTCCTCCCGAATCGCACCCGTCCACGGCTTAGTCTTGCATGTCCGGCACCCCTCACG
TCGCCTCCTCTTTCATTTCAGCCTCTTATGAAGCTGAAGCGGAAAGTGCCTGGCGCATAA
TATTTTTTAGGTACTTGATGTTTAGCAAACAAGAACAATTAATGTCCACACATATTCATT
CATTTGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCATATGGGCCC
TCAATTGTAAACATCTTTGATAGTGTACAACATCAACGATCCGATATTAGTCATACATCC
AGAGTACACACATACTCATGAGAACTCGATTTTCAAGTGTTTACTTGCCGGGCACGAAGT
TGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCT
CGAGCGGGCCCTTACCAGTGACGATGGCTTGCACAAAGTATCCAAACATGGAAAACATTG
CAAGACGACCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCGGGGTCGTCTG
CAAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTATAGTGGGTCGACGATCTCTCCGAGTG
GGCCACCAGCAACGCGGTACCCCTCGACAGCGCCCATGAGCACGACCTGGCAAGCCCAGA
TGGCAAGGATGCTCTGCGCGTGGACCAAGCTAGGATTGCCGAGGTAGTCGAGGCCACCCT
CGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACACCGTTGC
GAGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAATGGA
TCACCTCCAGCTCACGGTTCTTGGCGAAGGTCTCCGGGTCAGCAGAGAGCCCCGCGGTGT
CCCAGCCGTAATCGCCCGGGAACTCGCCGCTGAGGTAGCTCGGGGGCTCGCCGGAGAGCG
GGCCGAGGTAGAGCACGCGGTCGGGGCCATACCACGGGCTGCTGGAGGTGGCAGCCTTGG
CCGCGGTCTTGCGCATGGTGATGCGGCCGCCGCCGAGGACGTACGAGGCTCCGGCGAGCT
TCATCGCGGGGGAGGAGAGCGCCATGGTCGTCGCCGCCATTGCTTGCTGCCGGATGGAAC
AGAGCAAGCTGCTGATGTGCGGCTGCTGCTGCGACTGATGGGTGGCTGCGTGAGGAAGAG
AGGGGCAAGGCAGGAAGGTTAAATACCGGCCCGCGCGCGCCAAACGGCCAAAGGGAGGGA
GTGAGGGAGGGGGCCACGTCCTTATCTCGGAAATCACGAGCCGCGGCGCGATTGGCTTGC
GGGTTGGAGTAGGGTGGATGGGGTGGCCGTTGTGGCGCGCTCAGGGCCGGACACCAGGAC
GACATGAAGCTGCTAGGACGATCGACGATCGCTCCGCATGTCCATGTGGTGGACGAATGT
CGTCGGGGTTCCATCCCCACCAGGAGGGAAGAGCACATCCAAAAGTAGAATCATCCATTT
TTTCGGTCACATGCACCCTACTCTCTCCGTTTCTAAATATAAGTCTTTTAAGAGATTTCG
TTAGAAGTTACATACCGAGTAAAATGGATGAATCTACACTCTAAAGTATGTCTATATACA
TCCGTATGCACTCTATTAGAAAGACTTATATTTAGGAACGAAGGGAGTAGATTTTACTAT
ACGGCTAGTAGGAAACTTCACTAGGAGTACTAATCGTGGTGAGTGTTGATTATCACTTGT
ACATTAGGCAGTTAGAATTATGTTTCTTATTTTCTAGTTTTACATATATCTCTCGATCCT
TTCCTTTTATAACGGCAACGGTTGAGGTATTTTTATTCATGTACTCTATATATGCTAAGG
CATACGATCAATGCTAATATTAACAACCCATATGGTATCAGATACCGCCTCCTTCCTCGA
CCTAATCTCTTTCGCCGCCGACGCCACATCTTCTTGCCGCCGCCGCACCTGTTGCCACCG
CAACCTCCCTGCTGCCACTATGTTGGAAATATGCCCTAGA