| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_56495
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69488 |
2 |
247 bp |
None |
Not available |
Available |
None |
CDS Structure of MLOC_69488
Contig Sequence (8988 bp)
>contig_56495 8988 assembly3_WGSMorex_rbca.fasta
GGGCGGTCGGTCGCGCGCTGGCAACCGCAAGATTCTGCACGAATCTTTGCGAACCGCCCG
CCGCACGGTACGCCAGAGGTGCAGCGCCTCTCAATAGATTTTCCCAACAAAGAAATGTAG
GGGGAAATCCGCGTAGAAAAGGCCATGGTTGGACCTTTTTCTTGGACCTGCGCAAGCGGG
AGCTACATGCACCGAGCCGTCTTCTTTTAATACAATCCTTAGAAGAAAGATAAAATCTGA
ATCAAATTCGAAACACGCGACGGGGATGCGAATGGTGTAGTTTTGAGCTTTTGTCTTTTT
CCGACACCATTTCATTCATGCAGATTTGTCCTTTTGGTTTCTCCATGTGTATTTGGTTTT
GGATGTGAACATTTCAGGGATTGTAGACGCCATGTTGTATGAACATCCGGGGAAAATGTA
GCGTGTTCCGTAGAGATAAAAGAAAGCACCAGCCCGTAACCTGCTGGGTCTGACAAACGG
GCCCACGGCACAACCTCAGGCTGACCAGCAGGGTCCACCTCGGCCTCAATAATTTGGTGG
CATCAATCGAAGTGTAAGATATCTCAAAAAAAAAAAACTCAAATAAATCAAACCATTTCT
TGTCCAGCAGCCAAGGTTAATTAACCATTTACTTAACTACGTAGGAGTACTTACTTACTA
CAAGTCCATCATCACAGTTCAATTTATTGCACAAACCCAAAGGCACTATATATAGCCACT
TGGTAATAAAAGTTGGGCACCTAGCAACTACTCCCTCTCTCCTGGTCCTGGAGAGTGCTC
CTACCAAACAAACAATGGCCACCAAACAGAGTAGCCCCCAGACACCTCTCCCCCGCCCGG
GTCATCAGACGTCGTCGTCGACGGCGGCGATCACCAACACGCCGCCCTCGTCCACCGCGG
TGCGCCGCAGCCGCTGCTGCGCCTTCTCCACCTGCGTTCACATATTACGTAGCCGTGTCA
TCGCCATGAGCAAAGCGAGAAACGGAGCACAAGATTCAGCCGAAATAATCACCTCGCTGT
CCCAGTTGGTCCTGGCCGTGATGACGATCAGAGCCACCGTCTGCACCACCACCCCTATGA
TCAAGCCCCACCAGATCCCCTGAATCACCACAAACAGATCATCATCAGACCTCTGGAAAT
ATATGCTCCAGGATGGATAGAGGTTAACTAACTGAAGATGAAATTCATCGGCATGGGAAG
CTAATTGGCTTACAGCTGCCTCAAGGCTTGTTTTGAACCCTAGGACGCATCCGATCGGCA
GCCCGATGATGTAGTAAGCCCCCACGTTGACATAGGCAACTATGACCTGCCACCCGCTCC
CGACGGCCACCCCTGCAGAAATTTCCACGAAAGGATTTTCAGTTCCTTTGGTCAATGCAA
ACTTTACTAGGTACTGAATGATTTCCGTCAAGAAATGTCAGGTGTGTACCTGAGAGGATT
GGCTGGATCCCGTTCAAGAAGATGCTGATGGCCAGCAACGGCGTCAGGGCGATGACGGCC
TCGATCACCGTCGTGCTGCTCGTGTAGAGGGTGCTCAGCGGGTACCTGAGGGCCATCACG
ACGACCGTGGCAAGAATGCTGAAGGCGATGCTCGCCGTGACGACCACCATGACCGACAAC
CTCGCGACCTTTGGATGGCCAGCGCCAAGCTCGTTGCTGACACGGATACTGCGTGATAAG
GCGATGCAAACGTTTGATCAGCACAGGGAAATTGGTAAGCATCCTTGGTAGGTCTCGGTC
ATTTGCACTGACCTGGCCGCATAGCTCAAACCAAGCATGATTTGGAAGTCCCAGTTCCAG
TAGTTGATGCTGAAACAGGTCAAAGAAATAGCGATGCAAGTTAGTATGAGTGAATATGAA
GATATGGTCAGACAATGGAACATCCAACCAGTGTGTAACTATAACATGGGCTGAATCATG
GTGTGGCGTACCAGATAGAGAGCGAATCAAGAGCAATCTCTGAGTTGGGGAGGAAGCCAG
TCAGAAGCACAAATCCTTGCACGTACCAGACCTCCAACCTGAGCAAGAACACAAGGACGC
AAGACATAAACAAGCAAGAACTACGAAACAGTTAACTAGCAATGCCTGGTAAATTCACTC
ACGCTAGCATAACAGCCGACGCAAAGGCGAGCTTGGCGTATCCCCAGAGGCCTCTGAAAG
CGAGCATGGACAGCCCGGTCCATGTCTCCTTACAAGCTGGGCTCCAGATGATGTACGACC
ATGTCAACGCCACGAGCACCCACCAAGAGAAGCTCAGCGTCAAAGCCGCGCCAAGAAGGC
CAAAGCTGAGCACAAACACAGCGAGCCACGATATGAGGATGTGGAAGACGAACACAGCAA
GCACCATGTACGCCACGGGGTTGACAATGTTCTGAGCCTGCAGGAACCTCTGCATCGGGC
AGAAGACCGCAAAAGCGAGCAGCTGTGGCACCAGCCCACGAGCATACAGCTGCCCCGCCA
CAGCCACGGCCTCAGTCTGCCCAATGAGCCGCAGGAATGGGCCAGAGTACCAGTAGAAGA
AGGCGATGGCGACGGCCGTCACGAACTGCAGGACGAGCGCCCTCTGGCAAACAACGCCCA
TCGCCCTGTACCTCCTCGCGCCGTAGGCCTGGCCGCAAACCGTCTGCACTGCGGTCGACA
TGCCAAGCTGCATCCCATACAAGTGAGAAGACTTCGTTTCTAAGCAACACAAAGGACTAT
ACTACATAGTGCAAGAACGAGCGCAGCTAGTTACCATGATGCCGTAGGCTAGGCCCTGGA
TGCCGATGTTGGTGATGGAGGCTCCAGCGAGCTCAAGCTCACCAAGGTGGCCAACGAACA
TCTGTGTGACGAGGCTGAAAGTGAAGCTGAAGAGCGTGATGAGGATGGACGCCCATGAGA
TGTGCCACAGGTTGCCGGCCTCCCACAATGCCAGCCGCGACAGCACGTCGAATGGCACCG
GCTCCCGTCGCAGCAGCTCCTCCGAGGCGGCTGACCGGTCATCGACAAAGTCCAGCAACG
GCGCCGTCGCAGCGTCGCCATCTCCCTCCATTGTCTCCTCTCCTTAAGTGCTTCACTTGG
TCTAGTTCATTATGGACCAGGCCTTTGTGATGCTGATATATGCACGAACATGTGTACTGT
TCAGTAGACCTTTGAGTGGCAGCTAACTAACCTTCAGGTTCCATACCTACCAGTCTATTG
GCTGGTTGTGAATAAGTTGGTGACAGGTGCAGGGGTATGAGCATGAAGCATGAAACGTTA
CCAACTGAACACAAAACTAAAAATCTGTCAGCATTAGGTAGAATAAAGTGATTAAGCTTT
CCAGCATGTAATGCGTCTGATTCTAACAATCAGATCAAATCTTAAACATCCTTGCCAATA
AACACATGATACATCAACATGCCAGACAACAATACCTTACTCTTCTTGTTTCAGAAGACC
TCTTTCTAAAAACTTAACTATAAGCTTTCCAGCGGCTGGTTGTTTCTGTAAGGTCAGCTG
GCTGTCAACTTTTCGACACAATTTAATATCAGGAATTAAATTTCTCTGAAACATCTGGCA
CGCCACATTGTATGACTGAATTGCGAGACCTCTGTTAAGAAAACTCTCCATCAGAATGTG
GCATGTCTGAGCATCTCTCTGTGACGCAGTTCTCAGTACCTTGCTGAGGAGACTGTAAGC
TTCATTTATTTTACCTAATGCACATAGCTTCTCAATGACCTGATTGTATACACTCTTAAG
CTCTTGTCTTGCTAACATCTTATCCAGTAGATCGAGTAATTCTTCCACTTTACCCTTCTC
ACAGTATCTATGTATCACTGTCCTGTATGTAACAAGTGTAGGGACAATTCCTCTATTAAG
CATTTTCTTCACAAGCTCCGTCGCTTCTTTCAGCCGACCTTTCTTTCCCAAAGCATTGAC
GACAACAGTATAAGTTACAACATCTGGATGCCTGTTACTGAGATACAAGTCGTCCAACAA
AGACAGCGCTGATTCCAAATCCCCCTGCCGAGAAAATCCATGAATTACAGTAGTGAAGTT
AATAACATTAATGGTACAGCCTTTGCTTTGGCACTGCTCCATGAAGTCTTTGGCCTCTGC
CGGCTTTCCTTCCTGACATAACGCATGGATCAGCAAGTTAATCTCCACAGTAGTGGGAAA
GAAACCCTTCTGCAACATCTGGGCAACGACATCACATGATTCCTTTAGTTTCCCTTCCCT
TCTAAACCCATGCATTACAACACTGTATGTGATATCACTTGGAGTCCACCACTCCTCTCC
ACTGTTGTTTAGCAATTCCCAAGCCTCTGAAGTTTTCCCAGCTTTGCAGAGACCATTTAA
CAGTGCAGTATGCGTGACTATGTTTGGCTTGCAGCCATTCTTATACATATGCTTCATCAT
CTTTCTTGCTTGATCGATTTCCCCGATCCGACAGAACCCATCCACAACTGCACTGTACGT
CACAACATCAGGGCGACATTCTTTTGAGATCATCTCACCTACAATCTCCTTTGCCTCAGC
CATCCTCCCATTCAAGCAGAAAGAGTGCACAACTGCACTATATCCAACCTCATCAACACG
GAACCTTTTCCCCTCCGACTCCCTCAAGAACTCCAACGCCTCATCTGCATGCCCATGCTT
TGCAAGCACATGGATGAGCATGTTATACGTGACCTGATCCGGAAATAGGCCTGCATCATT
CCTCATCCTCCCAAGCAACCCCCGCACCTCTGACACCCTCTTCTCCTTGCACAAGAAGCC
CATCACTGTATAATAGGTAACCTTATCAGGTGGGCACCCATTTTGCAGCATTACACCGAT
CATCTCTAGCGCCTCAACAACCCTCCGCACGCTACATAACCCCTTGATGAGGCAATTGTA
TGTGACTACATCCGGCTCGACCCCGACACAGCGCATCCGGTCGCTAAACTCGAGCGCCTT
GTCGATGCGCCCGGCAACAACAAGCACATTCACCGCCATGTTGCATATGGATATGTCAGG
CGCGCACCCGTCCTTCTGCATGAGCTGGAGCACGCGCATGGCGGAGCGGAGCTTCCCCGC
GCGGCTGTACGAGAGCATGAGGTGCGCGAACTGCCGCGTCCCGCGCCTTATGCGGCGGCG
GATCATGAGGCGCATGACGCGCCGGGCGGGGTCGTGGAGCCTGGTGCGGCTGAGGAGGCT
CAGCATTTCGTCGAACACCTCCGGGGCGTGCCGGTAGCGCCACTGGCGGTCGGCCCAGCG
GAAGAACTCGAACGCGGCGCGGGCGTCCGCCTGCGCCTGCGCGCGGAGCACGGCGCGGAC
CTGCGGCGGGGAGAGCACCCGGAGCAGGTGCCGGAGCTGCGCCTCCAGCTTCGGGGTCCA
CGAGCCGCGGAGCTCGAGCAGCTTGCAGGTGTCGCGCACGGGGCGGCTGCGCGACTCCTC
CGCGAGGTCATCGTCGCGGGGAGTGTCCTCGACGACGGACGCCGGGGCGAGTTCTCCCGC
GGCGGCCGAGGAGGACGCGGCGGTGGTGCAGAGGCGGCGGGGTTGGAGGAGGAGGAGAAA
TGGGTTTTTGACTAGATGCCCGGCCATGGCGGCCGCTCGTGTGCGCGTGAGGAAATGCAT
TTGGTGGCTAGGAAAGCGGTCGGCGATGGCCGGAGGTTGCCGCCGGCGGCGGCGGCGGGC
GGCAGGTCACTGGCCGACGATGGATGGGCCGGAGCAACCTGTGTGGGGTCACAGCGTCAG
GGCAGCCCATGTAGCCTTTTTGCTAGGATGTCCAGTAGTTGTACGACTTTGCAATAAAAC
CCATGTGAAGAACAAACAATACCATTCTTCTCCATCTTCAACTCTTTCATTCATCTCGTC
CACCCGCTTCATAAGCACAGTGGCGGAATCAAGCCTAGGACAAATGCGGCTATAGCCTTA
GATGTAGTGACAATAGTCTCTGTAATATCTTCTTACAAAATACAGAAAATCTCTAAAATA
TATCATTGAAGCTAATTTAGCCCTAGGCATAGCCCCATGCTAATTCCGCCCCTGCATAAA
CCATCCCTGAAACTCAATTATGAAGGACGGGAGGCTAGATATGAAGCATGCTTCATAAAT
TACGATAATTCTGACATGTATGGTGACTATGCCAGAGTGTTACTTATTTTTACCAATATG
ACGTTCTGGCATAATTTTTTGTTTTGAGGAAAAGTCATGGATCATAGCGAGTTTTATTGA
TTAGATAAAAGAGTCAAGTCATTAGCCAAACTTGCAAATATACAGTTAAGGGGATCATGG
TCCTAAATACAAGTTCTAGACATAGCCACAACATTAATAGTTAGCTCATGAGCCACTACG
TCGCTTAGATTGATCACCGAATCTGCATAAAAGACATGCAATTTCAACCAGTGTAGTAAA
TTATGATAAGGATTATTATCAAGTAAAGCATGGCATCTTTGTAGGCTTTGATAAGACTTC
ACTTGGTTTTTCCTCACAAGTCACTCCATAGGATTTCTACACTGGATAAAAGCGAGTCAA
AATGCGCTAAATATTCTTTTCCAGCTTCAAAGTTATCTACCTACAGAAATAGGTAAAGTT
ACATTAGGGTTTTCTACACATACATCAACATTATTGCTAGATGATTCAGACGTATTTTTT
GAGCATTTGTATTTGCTACAAACGGATTATTATATTATTATTTTTTAGAAAAGGAGGGTT
ACCCTTACTAACAAGACTTTCAATCTCAACCACTTGCTCTGCAGATTTTTTCTTTACTCA
CAATGATTTCAACTTGTTTGTCGTGAATAGGAGAGAACTTGATTTCTCCAACCGGAATGA
TATAAGAGGGAAAAATAACTCAAAACACAAAAACATTTGATACAAGAGTTTCCATGAGGT
TGGAGTCATTGGAATTTTGCAATACAAAATGGATTCTAGAAAGTATTTCTATGATTCCAA
TCCTCCAAAATTCGTACAAATTCTCTTTGAACTACAAAATCTCCTGTTTCAGTTTATCTA
CTGCTACATCTAACAACTCCATTCAGACCAAAACATGATGAATAAAATTCACTTTGTCAT
GGCAAGGCCTGCTTCCTCGATGGATCAATGTCCCTTGCCTTCCCGTCTTGCTTCATTTAA
TCATTCCTACGCCTTGTGGCAGGAGGAGTCCCAAACTAGAAGAGATGGAAGGATGGGACA
GCCAATCACTTTGTGCGCCTTCGATCGGATGAAGCCATGGGCATGGCTACGGCCGGCGAC
CAACATGAGCCGCATGAACTCGACGAGCAGAGCGAACTTTCGCTACTCCCGAATAGCAAG
ATGACCCAGAATGATCACGTTGTGGCCCTGCGACCTGCCGAAGCCATGAGCGTTGCTACA
GCCACGATGAACATGAGCAGCATCAACACGAGCAGAGTGTAGGTTTTCTTCGATGACTTG
CGGTACTCCCCGAATAGCACGATGCCCCAGAATGTGCTCACAAGTGGCAATGCCTGATGA
ACAGCAATGCAGAAACAGTTAGATTCATATTCATAGGTGGACCTTTTAAGAGATTGGATA
CATGCATATAAGGAGGACTAGACATATATTGATTCAGCAAACAAACCTCAACAGCATCAG
CAGCAGCATGACCAGCAGCCTGACCACCCATGAACTGGAAGCCATTGCCGAGACCGCAAA
GTAAGCCGGCGAGGAGAGCCCATTGCCTCCCTTCCCAGTCATTCAGATAGGCCGTGAAGG
ACGACTTCGGCACGCCGGCCATCGGGCGGTAGAGGAGCAAGATGTTGAGCCCAACACCGA
TGACAAAGCACGACATGGAGAAGTAGAAGAAGGCGGTGTACACAACTAGATGCGGGACGC
CGTCTTTCAGGGTGTGCCACTGGTCATTGGTGGCGAGGTTGAGTGCCGGGGAGAAGAGCG
AGAGGCAGACCCCGGCAAAGAAAACCAGCCCAAGCCCCTTGAGGGTGCTCGATCCAAATA
CCTAGAAAACAATGAACACGTTTGACTAGATCAGTTCACCTCATTGGTGTTGCAAAAATC
CCATACTATCTGATTTTTTGCTCTCTGAAATGACCTTTCTCTTGACAGAATTAGTACGAT
CTATACCTTGACTGAACGCCGCTCTTCGAGCTCAATTAGGTATTCTGCAGTCCCTGCTTC
AGCTCTGGTGGCCTCTTCTGCAAAAGCTCCATTCTCTATGTCCTCATCTAGTGCACCTGA
AATAGGCAAAGTTAGCAACTAGAATCTGCAACTGCAATACATCAACAGTATCACTAGTGA
TGCATTCACCATATATACCTTGTTTGCTTGGCTCCATACCACCATTTGTCCTGTTAGATC
AGACATTATAATGGTCAGAGAAGCAACCATAAAGGCGTAAAATGGCTTACGACGATTGAC
ACCTAATGCACCTAGCCGATGTAAGTGAACCAGTGGGTAATGTGTGACTCAGTGTGACGG
AAAAAATGTGCAAGAAAGTGAGATGTTACCCATGGTTGTAGCCATTTGAGGATTCGCTTA
GTTTCTCTTCATTATCAGCTGCATTGGAAGCGTGTACAGCAGTCCCAAGGATGACTGCAA
CAAGGAAGCAACCCACTCCGGTGAAAAGAATATCTGCCCGGTTGATGCGGTTGTCCAGGA
AATAATTCAGTGTTGTACCTGAAAATACAACATGCGTTAAAAATGAGTGAATTCTTTGAC
GACACAGGATAATAGCAGAGCCAACAGGCAATTCGGTGCATCGATCGGTATAGTTAACCG
GAAATGTTATTTTTCAGATAACTTTTNNNNNGGCTTTCTTTGCCCTTCTTCTATATAATA
TATATATGATACGCACACTCGTGCATATTCGAGAAAAAAAGAAGATATCAGCTGTACTCA
TATCTTCAAATCTGTTCATATCTTGAGCTGTTTTTAATAAATGATAACCAGTGTTTCTTC
GAACCGGGCTTTCTCCCCTTTCCATTACTTTTATAACGGAAATACAACGTTTTATAACCA
GTGTTATTGCGCAAAATTCTAACTTAAACCAACTAGTGCTAACCTAGT
