Contig Data
morexGenes
Links



Map Locations of contig_5647 (4857 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_5647

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69468 1 417 bp MLOC_69468.1 Available Available LOC_Os02g51620.1, FRAME:+1, EVALUE:7e-45, 13102.m05875 protein glycosyl hydrolase family 3 protein, putative, expressed





CDS Structure of MLOC_69468






Contig Sequence (4857 bp)

>contig_5647 4857 assembly3_WGSMorex_rbca.fasta
TAGATACGTTTCAGACGTATCAGTCATCATGCCCAGTATTTGGCCTCTTAATGACCACAT
GCCTCCACTTCTTTCCAATGAGCTTCATAGTTTTCTGAATTGGACTGAATGTGTCATTGG
CAACATACACTTTTGGTTTATTAAATTACATGATTTCCAAAGCACCATGGACACATCCTT
CAAACACATCCGATTATCAGAATCTCTGGGATTCTCATGAGTTTCAGATTTAGAATCTTC
CACATATCTAATAAGTATCTTAATACAGTAAGTTTTTTCGAATAGAAAGAGGAGTACAAC
AAGCACTATCACGCTCAATATCAAAATTTGCATATCTTAGGGAACCCTATCAATGGAAAC
ATCAAGCGACATCGTAGAGTCTAAAGTGATATCTTCAGGCATTTTGGAGACAGTGACACA
TGCCTCAAATGATTGAAGGGGCAGCATATTCAGAATTAGTTCCATTATCTACCATAGTCA
CATCCTCACAAGAAGGCACAACACTCCCACCAATATTAGTAGCAATCACTCTAGTGGTTT
TTTTATTTAGGAGAGGTACAAGCTTCAGAAAACAGAGATGTATGAAATTCTATGGTTGGC
ATCGAAGTTAGTCCCAATTGCTTGTTAGTAGATGCATGCACATTTTTCTTGTTAGACAAG
TCAAGCTCATCAATAGCTGTATCATCATCCTCAAAAAGGTTGTTGTCAACAATATGAGTT
CCTTCCTCAACATATTTTTCTACATAAATATCCACAGGTACAGAGTCATCATTAGGGTCA
TCACTACCATACTCGTGAAAACCTTCAACCGAAAAGGGGAGAAGGTACAATTTATTTTTC
ATTTCCATTAATATTTCAAAAGGAATCTTATCAGGTCCTCTGTGAAGGCAATCTTCACCC
TAACAATCTCATAGAAGCTCTTCATCATTTCATTCCAATGAACATACACCAAGATACCAA
AGCGTGATGCAATTTGGGCAAGTACCTTCCAGAAACACCATATAGAAAGGACGCCTTCAA
CCTTAACCCAAGCTTGAACTAATTCATAGAAATAATCAATAGAACCAATCCATTCAACCA
ACTTAACAGATACACCATCAATAGGAAGATCAAAACTAGGGAGATCAAAAAGATCTTCCA
CTTTCTTCCAAGGTGGGAACCTAACTAGATAAGAGTTATTCAAAAATTGAGCGAATATGC
CAAAGACACATTTTGAAACCTCTCCTTTAACTACACTGTTCACTCCACAATTTCTGAAGT
TCAACCACTTTGGTTCATCACCAACTCGCGCATCCACATGGCAAAAATCCACACCAACAG
TAGAACTGCCGAAATATGTCATCATGGGGTGTAGTCGTGTCCAAGCAACGTGGTTGTTCT
TATTATGACCCTCTAAACCACAGATAAATCAAATCTTGGTGTCAATGTAGTTCCCTAGAT
AGTACTAGGAGACTAGGACATCCACAGGCAAAACAAACCACATGTTTATATTTCATCAAG
TCACCGCTCGATAGATTTAGGAGGGGGAGAAACAACAAGGTGTTGAAGACCTTAACACTC
GAGGGGGAGGATATGCATGAGCCTCCACCACAAGAAGTTGATTTCTCATTGGTGGTCCAT
CAGCCGCAAGAGATGTAGCAGGATGACCCCCCACCCGAGCAGCAGCCTTGTGAGGTGGAG
GTGCTCTACTCATAGAAGGACCCCTATTTTGGTGTTGTCATTGATCATCGCTTCAACAAA
AGATCTAGATCCTTTTGTAGTCCCCTCTCTCACAAATTTATATCTTATCGAAGTCAGATC
AAAAGGAAGGAGTTTCTTCATATGGTAGCAATCAGAGGAAGGAAAACATATCGATTGGAA
CAAGTCATGAGGCTCCTCACACATCCAAACAAGGGGTAGGAGATGAGCGACGTCGTGACA
ACTATGGGATGACCCACAATTGGCCGAGAACCCTAGTTAGAAATTCATACTCACTTAGCT
TGTGCGAAGGTGGCATTTTGGAAGGTGTAATCATAGACAACCCTGATGGACGATAGGCAT
AGCTTGGCGGGGGGTGAGGGCGGAGGGGTAGGAAGGTTAGGCATGTTTCAACCTACTACC
ATTCAGATCAATCATGACGGAGGGAGGGACTAAAACTGGCCAACGATGAGCTCGTTGCAT
GTGCTCCACCACATTCAAACCACAAGGATGAATGCAATAATATGTAGACTAGGGGAAAAT
CCTAAATCCGAATCATTCGAGCTACCAAGAGAACTTTTCGAGAATGCGTGATCGTGGGGA
TAACCCTAGAACAAGCCACATTAAAACCCAAATCAAATGAGACCATACTCAATTTTACGT
GTGATGAATGTATACTAGAAAGCCCAAGACAACGAATCAACAAACGAATTTGGGAGGAGG
AGGGGATTTTATCTCGCTCACCACGCCATGGAGGGGGTCGAGGTTTTGACGGTGTGAACT
CTTCAGAGTACCCCTTGCGTCACGGTCTCAAGATCTCAACGACATGAATTATGTCCTCTC
CACAACGTCGTGCCCGACGGTAGCGGAGGAAGATGGCATGGATCTGGCTTCACAATATTT
CGGTGTTTCACAACCCGCCTGTTGGAGCTCGCCATGGAGGTTCATTGCAATGGTGGAAGT
GGTGTGTGTGTGTGGGGACATGTGTGGAGTGAGAAGGAAGAGGGGACAAGGTGTGGGTCG
GTTCACAGGTTGCCCCTTTCCCTCTCATTTTCTGCCTTGTACTTCATTATTGATGAGGTG
GATCTTTTTTCATGCATGTTTTCATATTCAAAGGAAACTCTTGCATCAGAGTGGACGCCA
GGTGCTTGAAAACAAAATTGCGCCGGTAACTTTCATCTAAGTTCGTTAGATCTTCATCCA
ACGATTGAAAACAGATCATGACACTGTTCGTCTCCTCCATCCTCTTTTTGTCTTGTGCAA
CCGCCGGCCAATCCAGGCTTAACCGTCTGCCTCCGCCCCCTCCCCAGCGACCGGCAGCCA
TGCAAATAAGCCTCGTTGCACCATAAAATAACTCGGGGTCTCGGGCCGTCCCCTGCACTC
CCCCACCCCCTAATAAGATAGATAATGAGGCTATGGCTTTCACCTAAGATAGATTATGGG
CCATGACTTCCCCCTAAAAATATAATATAGATATTGGGGCCACTTATTCAACGAGGTCTC
TCCTTCTCCTGTGAGGTTAGTACGAACTAGAAAAAGTGACTAACGCTTTGAATAATATCC
AGGTACCTGAGAAATAGCAAAATCGATGTTTATATGATGAGACGTCATACATATGCATGT
TAACATAAATATGTTAATGAAACTAGCTATTTAGATATAAAAAGGGGGATACTACAAATC
AACCTGGGAAATCAGTTGGGTCGCCAGCCGTTGGTTGCATCCTCCTAGAGCCTTTGGATT
CGGTCAACACCCCCGCGTAAGGACGCACGGTCTTCGGCCGGTGATGCTACACTGCGGCGC
CTACACCCCCGCATGGCAGCTCAGGGACACCGATGAAGCTTCAATGCAACTATCGGTGAA
GCTACAATGCAGCATCGCTCGTTGCGGCGTAGCTCCGGGTTCGCTAGTGAAGCTCCACTG
CAGCCCCGGTGAAATTTCATTGCAGCTTCGAGTGCAGCATCGCAGCTCCAGGCGCGATCG
GTGAAGCTCCATTGCAGCCGTCGGTGAAGCTTCCTTGCAGCACCGAGCTTTGGGCCACTG
TGCGAGCGCTTTATCACAGCATCGGCCGTTGACGAGCACTCCACTGCAGCACCGCCGCAC
GCATGTGGCAGCGATGTCTAATGTTACGACGACTACGGGGTGCTCCAAGCTCGCTGATGA
AGCTTCATTGCAGCGTCAGTGAAGCTTCATTGCAACTCCGGGCGCCACCGATGAAGCTTC
CTTGCAGCACCGAGCATTGCATGGCAGCACCGGAAGCCGCCACCGAGTGCTCCGCTGCAG
CAGAGCCGCGCGCATGTGGTGACATCGTCTGATATTGCGATGGCGACGGAGTGCTCCGAT
GAAGTGGATGCTTTGTCGGAGGAGGAGTGGATGGGGTCTCTGAAGGAGGAGTGGCTGCTT
CACCGGAGGAGGAGTTCTTGAGCTCGTTAGATGAGTGGATAGGACATAAATGAGGTTTGG
ACGCGTCGGGGAAGAAGAAGCACAAGAGAGAGAGGGAGAGAGAGAGGATAAGGCGTGATC
TCGTGAAGTGGGAGGGGTGTGGACGATGAGTGGAAGCGGCCATGCACGGATCCACATGAC
ACGTATTATGTGAGGGACGCGGCTTAAGTGAGAGGAAAATCATTCGGTTGATTCTAATCT
TTTTTATAAAAAATATTAAAATTAAATACAAGCAAAGCCAATCATACCGCACTCCCATGG
GCCATACTGCATGTGGCATGTGCCGCGCCCTTCGCTTCATATACCCGCGTCATAGCCAAA
GCCAGCCAGCCAGACAGCCCGCCTCGCTCTCGCAAGTAAGTGACACTTGTGACAGTTCGG
ACGCACACTAGAGCCATGGGACGTCGCACTCACGTCGTGCTAGCCGCAGCGGCGCCAGCG
CTGCTGCTCGTCCTCCTTCTCCGGCTGCACGCGGCCGTGGCCGCCGACCCGCCCTTCTCC
TGCGGCGCGCCGTCGAGCGCGGCGTTCTGCGACCGGAGGCTGCCGATCGAGCAGCGGGCG
GCGGACCTGGTGTCGAAGCTCACTCTGGAGGAGAAGATCTCGCAGCTCGGCGACGAGTCG
CCGGCCGTGGACCGGCTGGGCGTGCCGGCGTACAAGTGGTGGTCGGAGGCGCTGCACGGC
GTGGCCAATGCCGGCCGCGGCGTCCACCTGGACGGCCCGCTCCGCGCCGCCACCAGC