| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_56459
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69462 |
1 |
345 bp |
AK248951.1 |
Not available |
Available |
None |
CDS Structure of MLOC_69462
Contig Sequence (6644 bp)
>contig_56459 6644 assembly3_WGSMorex_rbca.fasta
GTATGTCATGAACCTAGTCAATGCCATGTTANNNNTTATTTCATGGATTAATCTGCTCGG
AAAATTGCCTATTTATTCAACACATTCAGGGTGCCATTGATAGTAGGAGCCATCATCTCT
TTCTGCACAATTCAAACTTAGGACCTTAATAAGAATTGCATGCATTCCTATGAAACGGTG
AGCTTGTAATAATCATAATCTAGCGTCGAACTAAAGAAAACATATTTCGGTCCTAAGAAA
ATGTTGTTATGATACGGTCTAATATTGTTGCAGGTATAGATTGAAAATGTAGAATACTAC
TTCCAACCCCTAGTTGTGTAGTGGTAGAAAAATAAGCCCCCTTATTTTTACCCATAATTT
GCGCATTATTTTCTCATTTACCTGACATAAGTAATATACACATTCTGATAGAGTGCCCCG
TCTAAAAGGACCATATGTAACCTAACATGGCCATGCCATAATTATGAATTCGACTAAATA
AATTTATCACCCACCCTCTCTTACTTTAGAATGAGTGTTTTTATCCTATAAATCATTGCA
ACTACTCTTTCTATTACACCATTTTTTTCACATATCTCATTCCAATTTAGAATTGAAAAT
TAATTTATGTTTTAATGAATTCAACTTAATATAAAATTCCAATAATTCTTCTTTATAAAA
TTCCTAAAATTGATGTACAAAAATGATATGTTTTTACTGACTTTTGATTTCTATTTTGGT
TTGCGTCTCAAATTTAAATCTTGTTTTACTTAAATTTGAAATGTGTTAATCTTACTATGT
CCATTATATTTCACGCAAATGATTGTAACAATAAAGTACTACATTTGCAAGATTAAATAT
CAGCCAACCAGCCTCAAGCGAGTGTATTTTAGTGCTTGCCTCTTTATCAACCATCTTGTC
TATGGGAACTGGAGAGGCCAGATGGAAGACACCCTCACACCCGACAAATGCAGTTGCCAC
CATGTCGTAGTCAAGCATGTCTGCCTTGAACAACTGGAGATTTTCCGGGGCCATATCTAG
CTGTTTGAGACATGCATTCTTTGGATCACCTGAAACAGAAGTTAACAATTATTCACGTAT
ACGCGGAGCGTGAGTCCACAATAAAAACATCCCCGCCACAATCACGCTTTTAGCCCATGC
GACCATGTCAATTGAAATTCCAAAAAACACAAGGAGCAATGGTTTGAGCATTTGCATGCC
AACTTAAGTATCAGCTACTTCTAGTTTCCACAAACTTTTCCAAGTGCTTATGAGAATATA
CAACAATAATGTAAACTTCTAGTTTCAACATATTTGCTTAATCATTCTAAGATATCCCAA
TATTTGTATTATATTTTTTTACAAACAATAATCCAACACACACACATTTTTTACCAACAG
TAATGCAGCACGCACACGCACACACACGCGCGCGCACACTGACACACACACACACACACG
GAGAGAAGTATTATATACTCTAGATCTTTTTAATTCATAAAATTTAGTTTAGGGTATCTG
GTAATCAACAATGAAGTATTAAAAATGATAAAATGCATAGCGATTCATCTAAGTGGTATA
TATATAATAAGTGTACCAAGTCGTTGAGATATATGATGACTCGTATTTGACAGTAATTAT
ACCACTTTGGATCTGCAACATCAGATTCGACGTGACACAACCAGAAAATATCAGAGATTT
TATGCCCGAAATTTCAAAACGCTACTATGGCCCATTTGTGATGCTCAACTTTTGATCATT
CAAATTTGGCCAACACATGGGTACAAAGCAAATATAGTGACCAAATTAGAGCATCATAGG
TCAGCAATTGTTGTATAGTGTTATATACTCCTAAATTATTTTAAATGATATTTGACACTT
AAGTAGTAGACTAAGTCATTTTGCATCCATGATTATGTTACGCTGTTACACTCAAAATTA
TTGTTTGATATACAAAAGTTACTTTTCTGTTGAGTCACAACGCAAACATCACTGTAAGGA
ACGCAAGATGCGAGCCGTTAAACCACATAAAATATGAGTATTTATATTTTATGTCGTGTA
TTTACGTTTGCAATTTTACTTCAACTAATTTCTTGTTTTTATTTGACTGGGTTTTTGCAC
TTCCACTGCTTAATTTGGCCACAATTGTGCAAAATTTATGTTAACGTTTACACTGACAAT
GGGTTTTGCAATCTAGGCTAGCTTATTTCACAGCGTAGGGGATGGAAATGGCTGGCATCC
TTAAACAGTTCATTCATAATTCATATCACCCACTTGGGCTTTTGCAGGCTGGTCTAACCT
TTTCAAGCCACGCTGTCATCATACTACTAAAACTTGCAAAGTGCAACACACTACATGAAC
TCTGTTCGTTGAAATCAATTATGCTAATTAACTGAACAATTCTTTTCTTTTTATTCAATG
GACCTATGCCAAAAAATTGGGTTACATAAAAAATAAAAGCTTTAGATGTCCAAAAAACAC
CGGACGTTCCCATGCACATGGTATCGACAAAACAATTCTTAAACGGGATGTTCAAAAATT
TAACATATAAGGGATTATTTTTCTTATGACTCGAATGCACGTTAATTTTTCAACTCCACT
ACTATTTGCTACCCCCTCTGTAAACAAATATAAGAAGTTTTACATCACTACTTTAGTAGC
TGAAATACACTATTTATTTACAGAGGGAGTATGTTTGAAAGGGTGTGAGAGCATCTACAA
TCGGGCTTAGTAAACATGATCCTCTATATGTTCACGAGTGGTCAATCACCGGGCGTGTCT
GTTTTAAGCCCCTATATTTTGGTCCGCACAGCCGTACTTTTTATATTTTTATCATATGTC
CAATCACTTGCACGTGATTAATGAATAAAAAAAGAAAAAAAATGAATAAATGAAGTAATA
ATATGGTCCAGAAAGGGGGGCGTGCCCTACGTGGCGGACTGACCGGACGTGTCCGGACGC
ATCCGTGAACCCTCATATCATCTTCATGTTTATGATGGATATGAGGGGTGCCGGTCTGTC
CGGACGTTTGAGACGGATATGAGGGGTTCGGTTGAATCGCGTTTTTGTAACCGGTTATTG
ACGAGATGATCTGTGTGGACATTTGAGACGAGTACGAGGGATCCGGTTGTAGACGTTGTG
TGGATGCCCCCGAAACACACCGTTGTAGTAGCTGCAACGGCGATGAAAAACTAGCTCAAG
GTAATTAGCTTTACTCATCCCAGATGTCACCATTTTTCATGATCCAGGAACAGAAAACTA
AACAAGGTGCAGGGAGGAGGGAGCAGCAAAGAGAGCGCGCAGGCGTGTCACGTACATGGG
TCGCGGACGGTGGCGTTTACAGCGTAGCCGCGGGCGAGGAGCAGCTTGACGAGCCACGAG
GCGATGTAGCCGCCGGCTCCGGTGACGCACACCCGCGGTTGCGACGGCGGCGAAGAGGCC
ATTCCCTCTCGTTTCCGATGGTGCTGTCCTCTCTATCCACCCCGTCGTCTCGTCCTCTCC
TGTGTTTGTGCATAGAAGTAGTGCGCAGACTTTTACTACGACAGGTACAGAAACATAATC
AATCTCCCCGTCTCGTTACTACGACAGGTACAGAAACATAATCAATCTCCCACACGCAAC
GGGCGAAGCAACGACGAGATCCAGTGCTCTACGCAAACAAATCCATTGGATATGCGCACG
ACGACTACCTGTTATTTTACTTGGCACGCCTGTGGTCAGCTAAGCTCTTCTGTTTTTCTG
GAGGGAAGTGTGGTCAGCCAAGCACTGAAAAATACATGTAGGATTGTATACGTCTGCTTG
ATTCCTGCGGCATAGAATTTGCTACAAAATCTGTCCGACGGCACCACAGGGAAAAACCAA
CAAACGGGGATTCTAGAGCAAGCACGTTCAGCCTGCGGTGTTCCAGCGCGACACCTCACA
GGCCGTCCGATTTTGCCGCACGGCCGGCTCGCATGAATGCTGCGATGATAATGGGAAGTC
ACGGTGCGACCTGTAAATGCCTCGCACCGTCCATCGCGTGATGACCACGTCGCGCTGTAG
CGACGTTCCACAAAACGAAAAGGTCCATATCAAAGAGAAATGTCTAGAAACTAGTAATCG
TGCACGTGCAACGCACGTATAATCTTTGAAAGAAAAGGCTGCATTAAGTCTGTTTCAAAC
CTTGAACTTATACTAATACTATTATCCCAGCTTGAATCTCTAATCCCTAAAATCAAAAAC
CTAAACCCACATCACATTTTTCAAATTGATTGTCATACTAAACCAAGACCGTTTGGCAAC
ATGCCACAAGGAACTCATGGACCAGTTGCACCAACTTTTGCGTTATCCTAACATTAAACT
CAATCGAGTTGCGAAAGAGTGATGGAAAGGTACATCAACATGAGGTGAAATAGAGAAGAT
CATGTCCTTGGCATCCGCATAGGCATCATGCCAGGCGCCAACGGGGCCACCGGCTCTTGT
TTCCAAGCTACCAGAAACATGTGGTTGAGGGCCAACCAGTCGCTCGCTCCGTGCCCTTCA
TTGTGCGGGCATGGGGGAGACAAGCCAACGACAGGTGTGGGCGTCATTGAAGGAGCCAAC
ATCACAATGTGCAATCCTCTTTTTCTCCAAGTTCCTAAGGCCCTAACAACATGTCTTTCA
TGAAGTTTATTCACACGAAATCGTACCGCAACCAACATGTATTACGGAGCAATGTCGAGA
GAATCGCCCAAAAAGAAAGAAACAAAGTAATTGTTGAAGTAGGAAGAATGGGTGGTGAAA
ACAATTCAGAAATGTAAGCATCGTGTTTTTCTATTTGTAAACATGTGATGCATGCAATGG
CCATGCTCGTGAAAAATCATTTGTAGGCGTGTGCCATCAGTTTTTGCTTGGTGCCAAACA
AGAAAGAAGACTCGTTTAATGTAAAATAAGAACTACTCCTATAGAACAAGCTTGCAAGAC
ACATACTACATAAGCGAAACAAACTACAGTGCAACACAAGATTGCAATAAGCTGCATTAG
CATTAGTGATATATTTCTTGTATAAGAACATGTAAGATAACTAAAAAGCTATCATATATG
GATGGTGTATGATCTACATAAAATGATCCAATCTGGTGTAATTGTCTCGTGTGCGAGATG
CAGCAAAATCTTGATGGAGTGGGAAAAAAATCTTTGAGAGTAGACATGAACTTTTTCTAT
AGGCTTAACTATGATTTGGCATAAATTTTCAAATAATAGCTCAAATACAAGATCGCCATT
CTTTCATGTAACATATTATATATAGGTTATTCATATGAAAGATGATGCCAAGGAATAGGT
TTTTAGCTGTAAATGTGAATATGTAAACTGTTATAAAGCATTAAAATAAAAATGCAATCT
AGGCTTCCCGCCTGAAGAAAAAAGAGAAAATAATATGTGTTGGTATAAGACAGTACCAAA
TTGTACATTTGTTGAGTTTGAAGCCTTTCTCTAACAACAAATTCCTATTTGATACACCAA
ACAGTGTTCTCCCCCATTTGGTTCTACACTCATCCTTTGCTCTGCCTCAACATAATTGAA
ACCGGTAGCAAATGTTGAGCTCGATTTGGAGCAGAGGCCAACCAACATTAACAATTGCGA
CCAGGACGACCAAAATCTGACCAAGCATTGTACAATTTGATTCACGAAAACAGCGTCCAG
AAGAAACACCACATTCACAGGACAGATGAACTAAAATAAACTTGTAAATAGTCATAAACT
TCTAAAGAGTCATAGCGAGCATTTGAGAGTACAAAATTGGAGCCAGAGGGGTTGTATATA
GTGCCCCCTTGTACTCAATTAAACAGTAATTAGAATGACTTCACCTACGTATATCTGTGT
TCTTTTCATGATGCTCTCTCAAGAGCAACGGGGTCCGTCTACATCTTCTCCATCCCTCAT
CCCGGGATCAGGCTATTTGCTAGTTCTACAGCCATCAATTCATCATGTATTCTACAATTT
TCAGGTTCGTATCATTTGAGTACCTTCAGGTAATTTTCTTAAGCTTGTTACCCACAAATG
AACTGAGATTGGAAGGGAAAACCTTTCTTGCATCAAACTTTGTTTTCTTTAAGGTGCGAT
GGTGAACACTTGTCTCTGTCCAACATAACCTATTCCAAGTCCGCACAAGACCCTAGCTAG
GCATTACATCCAACACACAATCAGTTGTACTGAGAAAATTTTCTAACATCTATTATACTA
TTATTAATCACTGTCCATCTATTTGCTTCTTAACCCAATCCCATGCTCCATGACAGTATC
AAATCCCTAAATGTGGCCGAATTCATCCCATTCCGCTTTTTATGTTACCTAATAATGTGA
GTACATTAGGGACAAACACTTTGACCGAGTTTGACTATCTGTAGAGTGAATGAAATGAAC
TTGACGGTTGACACTAGAAAGGCACCTTCAGGAAAAGAAAACTCTGAATACAACAACAGT
AAAGTCAATACATGGTTATAAGAACCTTTACTCTCAAGGCATGCGCATTTATATGCGCAA
ACCATACTCCGAGATTGGAGTACTATGTTGTTTCTGTTGGGGAACGTCGCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGATGT
TCGATCTACGTACCCTTCTAGACCGCACAACAGAAGCGTTAGTG
