Contig Data
morexGenes
Links



Map Locations of contig_56438 (2697 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56438

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69443 1 716 bp MLOC_69443.1 Available Available LOC_Os11g10980.1, FRAME:-2, EVALUE:4e-33, 13111.m01163 protein pyruvate kinase, putative, expressed





CDS Structure of MLOC_69443






Contig Sequence (2697 bp)

>contig_56438 2697 assembly3_WGSMorex_rbca.fasta
AACCCCCCCCCCCCCCCCCCCATGTGCACAGCACTGCTGCACTGCCTATTGTGCTAACAG
ATTTTATCACCCTAACACACGTAGGATACCTATGAGCATATCATGTATGAGTATAGTGCT
ATGGTATAGGACCTAGTATACCTATTTTAAAGTAATTGCTCAGTTGCTCTACAGTCATAC
AGCGACGCAAGTGATCACAAAGGGATATTTTCCTTTTCCTTTATGCGGACCTATGTTTTT
ATGGTGTCGTTGTCTCGTCACTACATATCGACAATATAAAGGTGTGGCGCAGTCCCAGCC
TGAAGCGTTGGTTGTGACGATTTTTATTTCCCATTTCTCAATCCCCAAGCATAACGTGTA
GATCAATAGATACATATCAACACTTACACATAAGTTATTAACCAAGGTTGCCAACTTACA
GGACATAACTTCTTCACATTCTGTGCCGCTTTCCTCAGATTGTCGAGGGTCTCCTGATGA
TAAGTAGCATCCTTCCAAGAGAAATCAAACCGTGCAACTGCAAAAAGGAAAACATACACA
GATCATTATGATTATTATTACCATAACAAAAGCAGAAAAATTATGACTATCTATTTAGTT
GAAAAGAAACTGTCGTCAAACCTGACATCCCAGCAGTGAGGCATTCTTCAATAACTTCGA
CAGAATGCGAGTTGGGCCCAAGCGTCCCAACAATCTTAGTGAGGGATGGGAAAACTTTCT
GCAAAAGAGCAGACACAATGTATATAAGGGTCGCAATCCAGCATCGTGAAAATAAAGCCA
AAACAGTCTCCATTTCGTCGCCTCCCACTAGCCAATAAGAGGATTCGGTTTGCAATTAGA
AAGTCAGACTCGATCGCTCCCGTTGGGGAACACGGGTCATTAACATTCCGACGAAACGGA
TCACCGGTATCTCCCCACGCCCGTTCGCCCCCGCATCACTGCACACCAAATCGGATCGAG
ACAACCAACACAGACACATACACCGTGAACCGCATCCAGAGGAAGAAGCACGAATCCACC
CACAAGCACCACGGATGCACGGAGTTCGGGATCGGTAGAGAGGGAAAGGGGGGCGAAATG
GTGGAGGGGAGGGGCGCTTACGGGCTTGGCGGGGGCGAGGACGGAGGCGAGGCGGACGGG
CTCCTCGAGGAGCATGTGGTTGCCGCCCTGCATCTCCGCCGCGGAAGGAAGGTCTGCGAG
GGATCTTGCCTAGGGTTTTGCCTCCCTCGGATGTGACGCGATGCGATCGAGTCTGGCTCC
AGGCGGGCAAAGCGAGAGGAAGACGAGGCGGGGCCGCGAGGGGAGGAGGGAAGGAGGGAG
GAGATCGAGAGCGAGGCGTGGGGAGAAAGAAAGAAAGAACAAAAGAGCAGGAGACGTGGC
ATTTCGATTTCGTTTTGTTTAATATAAAATAAGACATCTCTTGACGGTTTGAAGCGACAA
AATACGGCGTCGATGACAACGGATAACCAACCAACAGTCACCACAAATCAGATCAGCAAA
TTATACTGCATCTGAGGAGCTACACTGAACACCACAAAAATTCCTAAAGATTCTAGGGTC
GAGGTCCTGCTGGAGGGGGTCGCGCCATGGCCGGAGGGAGGGGTGGATGGAAGGGACGGA
TGGGAGAGGGAGAGTGAGAGAGAGAGGAGGAGGAACGGAGGGGTGAACTGACTGCCGCCG
CCACGGCCGTCGGTTGCTTCAAGGGGTCGGGAGCGAGAGAGAGAGGAGCGACTCCAGCGA
ACGGGTACGCGGGGCGGGGTTGCGGGCGTTTCCGAGCTCGTTGGCTAGGAAAATTTTCGC
TTGAGGGGGGAGTGATGGTGGATCCCTTGGAATTGGGTCAACTTTTTCAAGCCCAAAGCC
TATACCACTCCAAACAGCATAATTGGATGTGACAATTTCAGATTGGTAATTTCAAGCTTA
TTTTCCTACATCCAAACAGGGTGTAAGTTTTTAAAGAAAAAATACTATAGGCTATATACG
AAACAAAGTGAATGAAACTACATTCTAAAATATTCTCTATATATCATCTCTAAAAAATTA
TATTAAAAACAAAGGAAGTATATTATAAAAGTATTACAAATATAAAATTAGTAATAGAAG
GGGACCTCCCTCCTACCATAGTTGGCAAGACAATGTGTAACCTTGTTTTCCTCTCTTCGA
ATCTTGGACGAAATGAACTCTTAATCCAACATCGACCTATAAAAAGGAAAACCGAAATAA
GAGACTTGTCTCATCCGAAATAAAGCAAAATAAGCTACTTTTATGTCATGAATTGCCTCA
AGTGTTCGCGTTCGCGATGGTGTAAAGGGTCGCCTTTGCATTGACATCTTACATTCTTAA
GAAGTTGGTTTCAATTCTTTTAGCATGCAAAGTGTCCATCTCATCGTTTCACTAGGCAAA
TGCATTTAAATCTCCTCTCACACTAAGCCATGTAAAATCTGTCAGATAAGCGCTCTTAAC
ATACAACGTGTCCACCTCAACGTCCGACTAAGCAATGCATTTAAGTATTCTCTTCCATTA
AACCATGCAAAATCAACCACATAAGCGAGTCATGCATTTAACTTATAAATTACAATTATT
TTTGCATTAGCCTATGCATGTAACACTGTATATTCCTCTTAGTCATTGTCGTGGGTATAA
GCCTGNNNNNNNNNNNNNNNNGTACGAATGAGACGGGCAGAGTCCTAGCTCCGGCGA