Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
![](/morexGenes/blast_net_images/contig_56344_assembly3_WGSMorex_rbca.fasta-MorexXBarke_maploc.png) |
![](/morexGenes/blast_net_images/contig_56344_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
![](/morexGenes/blast_net_images/contig_56344_assembly3_WGSMorex_rbca.fasta-Morex_bigstats_maploc.png) |
Predicted Genes from contig_56344
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_69388 |
1 |
806 bp |
AK353955 |
Not available |
Available |
None |
CDS Structure of MLOC_69388
Contig Sequence (2807 bp)
>contig_56344 2807 assembly3_WGSMorex_rbca.fasta
AAAGGCTTTGTTGTTGTTGTTGCTGCCTCAATGTTGTTTGATGTCTCTATCCAGTGGATT
AGTAGTCTTGCATCCCGGCAGATTGCAGTGTCACCCTAACCTTGTGTTCGTTTCCTCAAC
AGATATCACTCATCCAACTCCTGATCTTACGGGATACATTACCGAAGGTCAGATATATAT
TGACAGACAGCTTCATAATAGACAGGTGCACCTGCATGTTCTTTTTTGTCGTAGCTATTC
TTTCCCCTATTATAACATTGATTGTTCCTTCAATATATGCTTGTGAGGGATTTCTTTTTT
ATCATCTCAACGGAAGTATTGTCTTGCTTTTCTCAGATATACCCACCCATCAACGTCCTG
CCATCTCTTTCTCGTCTGATGAAGGTACTTTCTGTAGCTAGTCAAAATTTGTGGTATTTA
GTGTTTCTTATTTTGGGATTACGTGGAGAATTATGTCCTAATTCTTCACTTGCAGAGTGC
TATTGGTGAAGGTATGACACGCCGGGATCATTCAGATGTGTCCAATCAGGTATTCATTTG
AGCATCTGAAATCATTTTCATGTTTCGTTCTCCTTATGATTTCTATTGCTTGATAACATG
ACCCTCTGTTCAGCTGTATGCCAACTACGCCATTGGGAAGGATGTTCAAGCCATGAAAGC
AGTTGTAGGAGAGGAGGCTCTTTCATCCGAGGACCTGGTCTGTTGCTAGTTAATTAACTT
GTGCATTGATTATCTCTAAGTCCAAAACTAATGATATGATTCTCGTCATGCAGCTCTATT
TAGAATTCCTGGACAAGTTCGAGAGGAAATTTGTAGCACAAGGAGCATATGATACTCGGA
ACATTTTTCAGTCACTTGATCTGGCATGGACTTTGCTACGTATATTCCCCCGTGAACTTC
TGCACCGTATTCCTGCGAAGACCTTGGATCAATTCTACAGCAGAGATGCCACCCATTGAT
CCTTTTTGTTCATAAAAAAATAATTTTTTCATTAAGAGCAGCTTGAATAAGAGAGAAATC
CAAAGTTGTACTATCATTTTGCTACGCTATATAGTCAAATCCTATTCTTTCAGTCTGTAT
GCACAAGTTGTACCCCACATGTCTTGTGCACCTGGCAGCTTTGTAATTTCCATGTAGCCT
CGAGTCACAAGCTAGACCATTTTCTGGTTTTCATTTCCCTGTATTGTGCAGCAAAACTGA
AAAGCCGTTTAGGCGTACATGCGGAAGATGTTGGTTATATGTTTTTGGACTTGTGGAAAA
TGTAAAGAATATTATTTTGTTCCTAGTTAAGGCTTGTAAGTTAAATTGGTTGATACAAGA
AATTGCATGTTGGTTAAATCGGAGAAATTAAAAGAGCTAGGATAGCAGCCCTTCTCAGGC
CATTCACGCGTACCACCTTTGCAAATCCCGTCCGTTTTCACCTCACTTTCTCCCTATCCT
ATGTTATTGATGGATGGACCATGCGCCGGTACTTTCTCCCTATCCTATGTTATTGATGGA
TGGACCATGCGCCGGTGGGTTTGTTGACGGAGACAGACCACCGTGTCTCTCCCATGACCT
CGGAGAGGTTAAAAGACGCTAGGATAACAGCCATTCTTGGACAATTTTTCTGTTTTAACC
TTTGGGGCTAATGAATTCCTGAATTGATCTTACAATCATTTTTTTCCGAATCTGACCTCC
TTTTATGACGCCATCATCTTTAGCGTCTGGGTTGCACGGGAGATGTCAGGGTCCCCGGCG
TCCGTCATGGGACCCGCTCGACCGACTGGTCGTTGACTCACTGCCGTGGCAAAGGGCCAG
ACGCCAGGTACCCTTGCGTCTGGCCTTGGTAAGTGAATCAGGCGCGCGGGCCCGCCCCAC
CCGTTCCCATCTTCCTCTCGCGAATCGAAACCAATCTGGCTCTTCTCTCTCGCACCTCTT
CCCCCTCACCCCCCCTTGATCTATTCCATCCTCCACCAAAATATGTGGATCTAAGCCCTT
CAATCATCCTTGAAGTATTCTCCCCGAATCTCTTCAATTTATTTTTGTCAGAACATCTTA
TTTTTAGAGCATTATTGAAGATTGGGTGATGTTAGATTAGTAGATGATTTCTTAGTTTTA
ATAATTTTTGTGTAGTTGTTAGATGGTATAGATGATTTGTATGTAGTATATGATGTGTTA
TTTAATAGGTATGTAAATTGTTTTGTTCAATATGTAGATAGACATATTGTTGTATTTTTT
TTTCTTACAGAAGAGATGATGAAATATGATGGTTGTTTGATGAATTGGTTTTTTAAAGAG
ATTTGTTTGTGTACTCTAGAAAATATGTCTTTGCATATTTTGTCAATAGGAATGCTTTAG
AGAGATGTTTCGTATGACGAAATATTGCATATATTTTTCATGTATTTAAAGATCATGATG
TGATTTTTGGATAGGATGGTGGATGATGATGGCACCAAGGGCCCTGACGTCTGACCCGAA
TAGGGCAACCAAATGCCAAGGACCCTAGCGTCTGGCCTGAAGAGGGTAACCAAACAGGGC
AGTAGAACATCATAACAAAAGATCTTCGGTGAGTTCAAATGATCTCGAGGGAGTTCAAAC
AATAGAACATCACAACATATGCAACCAAATGCCAAGGACCTTGTCGTTTGGCCTAATCAT
GAGCATGTTTATCACTTTTGGTTAGTTACTTTTGTTCTTGAGGCCACGGAAGAAGTCATG
TTGCAAGTAGTCATGTGAAGTTGATATTCGTTCGGTATCTTGATGATATGAATGTTGTGA
TTCCCTTAGTGGTGTTATGTGACGTCGACTATATAACACTTGACCAT