| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_56342
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69387 |
1 |
2354 bp |
MLOC_69387.1 |
Available |
Available |
LOC_Os07g35300.1, FRAME:-1, EVALUE:2e-82, 13107.m03608 protein TKL_IRAK_DUF26-lc.11 - DUF26 kinases have homology to DUF26 containing loci, expressed |
CDS Structure of MLOC_69387
Contig Sequence (7628 bp)
>contig_56342 7628 assembly3_WGSMorex_rbca.fasta
GGGCGGGCGCCCCGTTGCCCCGGCCTATGGGCCGGTCCTGGATGGCGGATGGCAACTCCT
CGTGAGGCGGTTGGTGGTGCGTGTGGCGCCGAGGCTGCGGACGCCGGATCCCGGCCGTGG
CTGGCAGCGATCGTCGGATCTTCGGAAGGCAACGGTTGCGAGCTCACCTCCTTGTTCCAT
GGGCGTGCACACTATGGCAGGATGCATTCCAGCGACAATGTTTGTGCATTGTTTTTTTTT
TGAAGGCGTCGGTTTTGGAGAACCTCTTTTGTAGTCCGGGCGTTGCCTTTGGTGATGGTT
CGAGTGTTGTTGTTGGTGTGAGTGTTTCATCACTATGTCGGGGTCTTTATTTTTTTATTT
TTGTTCTTGATTGTGTGCATCTTTAATGTTTTTCAATATCGTGTTGGTATAAAGATTGAA
TGTAATTGATAAAGTCATGATATTAATATATTTTTCTTTTCAAAAAAAAGGTGTGTAGAC
TCTTTCCTCTGCAGTTAATTTTGACGTCTGAAGCGAAGGCATTGGGAAGCTTAGTGCAGC
TTGGCCAAGAACATGATAGAAGTAATTAGTAATGTAGCACTAACAAGTCACACTATGCTA
TTCAGGATAGGTTCTAACAATCAAAACAAATCATTGTGTCAAACATGAGATTTATAATTC
CTTAAAAAAATCATTTAACAACGTGTAGTGATATCTTCTAATACCGGCATTAGAAATATA
ACCGAGTGTTGAATGCTTCACAGAAAAGTCAGTGTGGATTGCATCCTAAAGCAATACCAG
TCAAACAAGTAGCAAATGACAGGGACGGGACTACAGAGATGTCTACATCATTAACTAAAC
AAAGCCGGTCTATATCGCTATGGGATTATCCTGATAATGACCTCTACCCAAATCTGTTGA
CATCTTAGTTTCCAGTTAATCCATTGTCAGTAATTCAGATGTTGCTCGCTTGCCTACAAT
TTCTAACCGGACATTTCTACTAAAGGCATCTTCAATAGTCGTATGATTATCGTTGGTAAA
ATTGCCACATAGACGATTTGGATGATATGGCACGTAATAAAAGGAAAGAGAGAATGAAAC
CGTATGAACTTGAAGCAACGGTTCAGACACAAGCTCCGAGGCAAGCATGCCCATTTCTTC
AACATTTAGTGGACCCGTTTAGTTATTTTACATACGGTTAACATGCAATCCATTGAAGAG
TTTGTATGATGTGTTGTTGGTTGCTGACGTGGACATTTATACCAACGATTGAACATACAG
ACTATTGGAGATGCTCTAAACCGTAAGAAGGTGTCCTGAACTGAATAGGCCATGCAGGTA
TGTTAAACTGAATAGGCCATGCAGGTATGATAGAAGAAACTGCAAATTGAGGAAATTTTG
TGTCTGCAATTCACCTCGTGGGGTCGCCGTCGGCGTGACGTTAACAGTCGCAGGAGGAGG
AGCCGGCGGCGCTGGAGGTGCTGGCAACCGCAGGGTCGGGCTTCCGGAGAAGAAAGGGAC
AACCTCGTACCTGAAATTGCACCGCACCCCAATCATCCTCCCGCCTATGCTCCCGCTGAG
ATCCTGCGGCATCTGCGTAATTATGTCTCCGAGGCAGCTCCGGCAATCGGCCTGTGACAT
GTCGGGCGTGCACTGCACGAGCCCGTAGATGGTGGGGTTACTGGTGTCGAAGGCCTCCTC
CCCCGTGGCGAACCGCCTGGACGAGTTTGCCGCCGCGTAGTTGGTAGCGTTGAGGAGTGT
TTGGACGGCGGCGTCGAACACGTCCACCGGCGAGCTCACGCTCTGCGTGTTCTTGAGGAC
GATGGTGTTGTCGTTGCTGGTGGTGGCGAGGAAGTTCTGGTTGGAGAAGCGGAGGTAGCA
GGGGTCGTAGATGACGGTGGCGTCCTTGTTGAAGGCGCAGAGCTGCTGCGCGTCCTGGAA
GGCGGTGGTGACGCAGGCCTCGCACGCGGAGGCGTTGCCGTCCCCGCGGCAGAGCGCGAG
CGCGTAGACGATGTCCGGGAGGGTTCCGAAGCTGCCGGTGGCGAAGAGCGTCCGGGAAGC
GGATGCGTTCTTCGGGAGGGTGGCGGAGAGTTGCCGGATGTTGGATTGGTAGGTGTCGTT
CGCCGCATAGTTGCCGCTCTTGCCGCAGATCTGCCACGGCGGCTGGGCCGCGGTCGGTGG
TGTGAGGAGGAACGCAGTGAGGATTGTGGCGGCGAGGCGGTAGAACGGGCCGTGGCGCGT
CGACATGGTGGTCGGGGAAAACAACCGGTGTGAGTGTGACCACCACCGTTGAAGAAGAAG
AGATCAAGAGAGGCCAAGGTGGTCACGGCTTTGCTGGTCCTCTACTCTCCAGTAATAATT
GAAGGAACATCATTTGACTTGCAACTTTGTGAAGAATTAGTTTGACTCCGTAGGGTGAGC
AGTGAATGACCCACTCTTCGCATCTGTCGTTATTCATGTACCTCGGGAGAAAAATTGTGT
GGTTTTTGTCGGACGAAACGAAAACGATTTTATCCCCACTGCTAATGATTATACGCCGGG
CCAGGCCGGGCTTCAAAAAGCCAACTCCAAGCCCAAGCCCGCTCAAAGCCCGAAAATGCA
TATTTTCTCAAGCCCGAACTTGCCAGAATATAGGCCCAAAACCCGAAAGCATGGCTGTAA
TGATATTTGCAGTTACGGGTAAGCCCGGCCCGAAGACCGAAAGCCCGGCCCGAGAAGTGT
AAAAATGAAAGACTGAGTGCGGCCTGAATATACTTTCGGGTTGCAAAACAAAGCTCGAGC
CCGGCCCATGTTTTTTGGGTCGGGTCATTGGGACGGGTTGTCCATGAACATGTTTTTAGG
CTAATCCAACACATTCCCTCTTTCTAAAAATTACTATTATTCTTCATAGGCCCGCGCTAT
GCTTGAGTCAACTACTCGACAACCATCAAATTTGACGTCTATAGCTGTTGGATTGTGTTT
CCTGCCAATGTATGCCTTCCTCACGGACGCCGCTTCAGTCACTATGAATAGATCCATTGC
AATGCAGGTTGTCCTTCCCCAAAACCGACGTCCTCATCCTTACAACAGCATACTCCCCAT
CCATATATATAGGGCCTAATACATTTTTCAAGATGACCTTTCACCATGAGTTAGCACCAT
AATATATGACATGCATGTTAAACAAAGTATACCATCAAATTCGTATGTGAAAGGAATTTC
TAGTGATATAACTTTTATATTATGTACTTATATACTAGTAATTTTACCATTGTCCAATGT
CTACCTTGAAAAAATGTATTAGGCCCTATATATGTGGGTGGAGGAAGTAGGTACGATGCC
TCACCGTCACGGCATCCCAGTCCTCACACATCGTCGTTGTCACTACAACCCCTTCGAGTC
GTCGACGTCTCCCGGTCGCAACATATGCCGCCCATGTTGCAACGCCCCCTCGGTTGTCAC
CCGTGCCTTGTCAACGTAGCATTATGTCCGTCGATGTTGCTTTGTAGCATCGTCAACCGA
GTCCCTGCAACACCTCGACACTGTACAAAACCGATGACACCACGTCATACATCGCTCTAC
AAAAGTGCACATCACCTCGAGGGGTTGACCTAGCCATAGCATCGGCATGGCCGCATAGAC
TGTCACCATCGCAACACCTCCAACGTTGCAGCCAAGAGCCTCAGTTGCTACCTTTCAACA
TCGTCCAGGTTTTTGAAGCATCAACATCACAACAAGAGTTAGTGTCGTCACATCCCAAAA
TTACCAAATTCAGTATGTGCACTTAGAAGCATCATATCCCATGATTCCTTTGCATATTTG
GTGTTTGAAAATCAAGTTGGCGAATATTTAAATCATAAAGGAATTTGGAGTTTAACTAAA
GGTCATAATGATTTTCTCTATGCATAAAACTATTTCAAAATTTGTATTAGGGCATGGAAG
GAATTTCCAAGGATATATATGCCCTATTTTTCTTTGTGTGTCAAAGGATTGAAAGTAGTT
TGAAGTTGGTCAATTCAAACTATAAACAAATTTTGGATTAAAAAAGAAAAACAAAACATA
AAAGGAAACAAAAGGAAACAAAAATAAAATAGAAACAAAAAAATAGAAAGGAGAAACAAA
AATAAAGCCCAAACGGTAGCCATCCTGACCAACCAATATGCCGGCCCAACACACGTGCGC
CCAGTAAAGAAAAAGAATGAAGTGGTACGTGGTTTAGTTCTAGCATTTTCGAAGTAACCG
TATTGATCCCACAATGAGCACATGAATCAGAGTTTTGCCTCCTGTAGTGAATTATGTATT
TTTATGCGTGCAGATAATTATAGACTTAAAGCAAAGTGAGAAAGCTAATAAATAGTACTC
CCTCTATAAAGAAATGTAAGAGCCTTTAGATCACTAACATAATGGTGTAAAGGCACTTAT
ATTTGTTTACGGAGAGAGTAGTTGAGTAATAGGACAAACTGGAGATAAATAACATAAAAG
TAATCAGAGAGTAACTTCTAAATAACTTGATAGAACATCATAGAAGTAAGGCATTCTCAA
GGAGTCCGAAATCCCCATTGGTATATTTATAGCGCACCTATATCTAGGCATAGTATGACA
TGGATACTTGAGCCATTCTTGACGAGTATGCTGCGTGGAGCGAGGTAGAGAACATATTAT
ATTCGAAGTATACTTCATGCCACGCACGACACCATCATAGTCCCCCCATAGGGATACAAC
TCATGATAGTTAAGGGTTACCCAAGAGACGGGACATATCTAAGGGTTCTCCATAATTCCC
CGGTCAACTGCAAAGGATAGGAGCAAGAGGATTTTACTGTCACTGGGTATAAGCACTCCT
GAAGGAAGCAAAGGACGGTTCGGGAGGCGCTTACGAATGAAGTTTTGATCGGTGACCTCG
CACACGACAACAACCACCACCTGGTGCAAGACTTCCTCCACTTGCACCGGCTGCTTCAAC
AATGAGGCGTCCAACTACTGGACAGCACACCGGACCACATCTCCTGGCGCATGGAGAAGT
CCAACAACTACGGCGAGATCTGCATGCTCCATGCAGTTTCACGAAAGAGTTTCTTCCAGC
TATGACAAGCCGATTTGGAAGGCTTGGGCGCTGGGAGTTATGAAGATTCTTTCCTGGTTA
ATGTTCCAAGAAAGGTTGTGGTGCAACTACATATTGCAACGGCGGGGATTGCCCAATGAA
TACTTCTGCCAGCTGTGTGTCCAAAACCTAGAGTCTTCTAAGCACCTATTCCGGACTTGC
CTGGCTTCGCAGGAGGTATGGAGCAAGATCAGTCAATGGAAAGGTTGTGGCCCTCTGAAA
CCAAAAGAGGACTGGAAACGGCAATCTGCGACAACCATTGCGCTAAAATCCCAGGAAGAA
ACCGAGGGCAAAGGGAAGAAGGGAACCAACACGATGAGACTTCTCACCTGTTGGGCTATT
TGGCAGGAGCGTAACTAATGCACCTTCCAGAATAAGATACCAAGAACTAGAGATATCATC
TCAGTGATCACAATCACAATGGAGTAATGGAGGATAGCGGGAGCTAGATGCATTCAGAGC
CCCTCCGGGGACCCACCATGAGAGATTCCTCATTAGGAGCCTTTTTAGATTTCTTTTATT
TTTCTCTCTTTTATTTTTAGGAAGTTCGACCGACCTGTGGTCCAACGTCCGCCGATCCTC
GGATCTTCGCCCCAGTTTGTTCTCCCATTGCTTTGTGCTATCAGTAAAATCGCCAGCGTA
GCTGGATCTTTCAAAAAAAATATAGCCCCACATCCTAGCCCTTCACAACGATACTGATAT
ACTTTATGTCCATAAGGACCAAATGTTGAGTGAGGCCCCTTCACAACATTCACAAAGTTA
TTAAACTAAGCATTCAATAGGGAATCTCATATCCAAAATAACATTTCAGATCCTACACAT
ACCAAGCTTCATCCATATACCCGAGAACTAGGGTTCTACTCACACATGAGTAAAAAACCA
TCATGACGAGAGTAATGGAGTACATGGATGTGTGATTCATATAACACACAAGGCGGTCCA
CTAGGGATCTTGTTGTTACAATGAGAAAGATGTGGAGTATGATAATGATGACAGTGGTGA
TGATGATGACGTTGGCAGTGGTGACATGTTGAAGCCCCGTATGCGCGATGACGAAGATGG
CCCTCTTTGATACATCCATTTTGCATCATGTTTTCCATCAGTATTTATTATGATTTGAAT
CATTATTTCACTTTATGATGCAATCCTAATGCATTTTATGTCTTATTTTGCAAGTTTCAT
TCAAAGAGGGAGATTGCCGACAACTAGAATTCTGGACTGGAAAGGGCTATATAAGAGTTG
GATATTCTGTGGAACTCCAAAAGACCTGAAAATTTATGGAGAATTATTTTGGAATATATA
GAAAATAGTAGCAAAGGAATTACCATCAGTTGGCCCACCAGGGAGTCATGAGCCCATGTG
GCACGCCCTACTCCCAGGGCACACCAAGGAGGCTCGTGGCTCACCTGCCTGGCCCCCAGG
GCCCATCTTCTCCTATAAGGTGTTATTTTAACTAGAAACAAATTAGAGGAAGATTTTTGG
GATGAAGCGCGGTCGTCTCGAGGCGGAACCTAGGAAGGAGAGTTTTGCTTTCCGGCGGAC
CGATTCCTTCAAGGAAACTTCACTCCACGAGGGAGAAATCGAAGCCATCGTTATCACCAA
CACTTCCTCCTTCATGGGAGGACCGATCTTCATCAACATCTTCACCGTCACCATCTTATC
TCAAACCCTAGTTCATCTATTGTATTCAATCTTTATCTCAAAACCTCAGATTGGTACCTG
GGGTTGCTAGTAGCATGGCTTATATCTTGTAGTTGATGCTAGTTGNNNNNNNNNNNNNNN
NATCATATGTTCAGATCCTTAAGCATATTGGATATATCTCTGAACTTGAACATGAACATG
CTTTGTGAGTAGTTACTTTCATTATTGAGGACATGGGAGAAGTCTAATTATAAGTAATCA
TGTGATGTTGGTATTCGTTTGATATTTTGATGATATGTATGTTGCTCTTCTCTTAGTGGT
CTCATGTGAACGTGGAGTACATGACACAACACTATACTTGGGCCTAAGAGAAAGCATCGA
GGAGTGATACATCTCCAACGTATCTATAATTTTAGATTGGTCCATGCTATTATATTATCA
TTCTAGAATACTTTTCGAGTAATAATTTACCAATTTATATTNNNNNNNNNNNNNNACCTA
TTGACCAAGTGCCTAGTGCAAGTTGTTTCTTTATGTGCATTTTTTACTTTTCAAGTTTAC
ACTAGCAAACGAAGTCCAATTGCCCCAAAAAATTTTATGATTTTTTCTAGAACAAAAGAA
AACCTCCAAGCCTTGGGAGAAGAGCGGAGGCCACACGAGGGAGGCAAAATCCAGTAGGGC
GCGGCTAGGGGCGTCGGCGCACCTTGATGGCTTGTCCCTCCTTTGTGGACCTCCTACACC
CGTTCTCTGGCTTATAAATTCACATATATTTCGAAAACCCTAAAGGCCATCCTAAAACAC
TTTTTCCACCACCGCAAGTCTTTGTTCCATCATGATCTCATCTGGAGCTCCGTTCTGGTA
CCCTATTGGAGGGTGGACCGATGATGGAGGGCCTATTCATCAGCCTTGTTGCCCTCATGA
TGATGTGT
