| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_56336
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69381 |
1 |
1726 bp |
MLOC_69381.1 |
Available |
Available |
LOC_Os03g43440.1, FRAME:+1, EVALUE:0.0, 13103.m04669 protein CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_69381
Contig Sequence (7714 bp)
>contig_56336 7714 assembly3_WGSMorex_rbca.fasta
TTCTGGATTGGAGGGTTTGGAGGATAATAAATGCTCATTAACATGATTTTAGTCTCTTTA
GTATTTGGATCCAAGCATGAGTGAGACTAGCAAGTTTTAGTCTCATTACTNNNNNNNNNN
NNNNNNNAACGTATCCAAGCACCCTCTTAGTATCCTCAATAGACTTTTTGTCCTGTGTGG
CATGCTTCTTACGGAGGAGCCCAAGCCTGCACACAGGGGGAATAGAGAGACAAAGCATAT
GAAACAATAAGTACACAAGTCTACAAAATGCATGAAGTACAAGAAGCAATGCACATAAGT
GACAAAAATTTCAGAAAGCGGTTATACCACCCCTAGCACGGGGTGAACCGTTTGAGTGCT
CGTACCACTCAGGAGAGTGGTTTTATCGCTGCCTGACAAAACTTCAAGTGCGGCTAGGGT
TGGCACAATACACAAATCTAAATCACAATTCACTAGAGTTAATCGCTACTGCAACAAACA
TGATACAAGCATCTAAGAGTGATCTCCTCCACCAAAGTTTAGCCAAAAACATAGGACACC
ATAATAATGCCATAGAAAATAGAGGGTTCAAAGATGAAGCCTAAAAGGACGGATCGGATC
GTTGGCATCACTGAAATCCATTGAAGGAGGTCGCGAAAGAGGACCGATCCATGGAGTCGA
TATGATGAAGCACCGATGAAAATGGGGCACCGGAGGGCTCCCCGGAGTAGTGGCGCCAAC
AGCCCGGAGTTAGGATTCTAGATGGGGGTGGGGGAAGTGAGGGGGGAAGATACCCCTTCA
GCCCCACTCCCCATCTTTTATACCCGAAGAACTCTAAGCGGTCGTACCACTCCTGGTACA
ATGCATGGTAGTGCGAGCGGTACTACCACTTATGGGAAGGCAACAATAGTACCGCTTGCA
CTACATCGGTTGTACCACCCAGTTGTGCAGGCTGTCAGGAGGCCGGTAGAACCGCTCTCC
TACGCTGGTTGAATCGTACTATGACGGAGACCCATGTTAGGGCGGTATGCACTCAAGAGT
TGCACTTGGTAGATTTTGGTTCTCTCCTTAAAAAGGGATAGGGAGGCTATGTGGGTGCAA
TATGAGTTTTTTGTATGTGATTTGATTCCATCTGTACCTTTCAACACGGATACCCTCTTA
GTGATACAATTTTTCTACGATCAAAGAAATAAAAGTGTCGGTAATGTTGTCTTTGATTTT
TTTTTCTTTTCGAAGGGGATAACTAAGTCGTTTTGTGCCATTTGAATATGCATGTGTAGC
TCAAGCACACCGTTAGTCCACAAACCTCGTTGTCATCAACATCAAAACACTAGGAAAATG
TTATTTCATGTTAGTCGCTACATAAATCGATGACTCGCTTCGTTTGCGCAATGCATAATT
AACCGTCACGATATATGATTTCCCTTTTGTGCCTAGCTACTCCATTTTAAGGGTTGTTTG
GTCCTATGCCTTGGATTGTCACACTTTGCCACACATCTTTTACCTAAGATTAGTTTAATA
AAATGAGAGCCATAAGCGGAACACCCACCTAAGCGACCAAATTGACTAACCCTAGATGTG
ATAACTTTTGACAAAATTAGTCTTAAAGCAAACATCTCCTTAATGTTAGCGTCCATCGGA
TGAACCATATCATCAGCTACGGAGGACTATCGTGTGAACCTCTCATTATTTTGTCCATGG
TGAGAAAGTTTTCTCTACTCGAAAAACGAACAAGAGGACACGGATGAAAATGCTAGGATT
CTGAGATATTCCTTTTAAGTCACATCAAATTTCCAACTTACCGCGGCCGTGCTCCTTTCT
TTTTACAGCATGTATATCTCCACCAGCAACGACAATATGTTTCCATGGAAAAGAATGAAG
CCATGGATTTTGACGGTGGGATTTCCATGCGTCGAAATCGTGTAATTAATGCCAGCTAGT
AGAGTAATAAATAAATGGAGGAAACGAAAAGGAAACGGGAAATTCGCAGGGTGGGAAACG
AAGCGCTGCCTCCATCTCAGGCGGGTGGGGGGATAGGCCAGAGAGAGACGTTCCAATCCT
CAAGGTTCCAGCTGCCGCAGGCACCGGGAACACGGCCGCTGTTGGCCTCTGGTGTACGCC
AGACGGCTAGCCTAGCCCAGTGCACCGCGCGCGCACGCTGGAGCGCGACTGGAGCCAGCC
GCGCGACCACACGGCCGTAGGTAGGAGTAGATCTCTCCTCCTCCCCGGTGGGAGTCGTCC
CCTTCGCGGAAAAGCTTGCCTCGCCTCGATCTGCCGATATTTCTGCGCCCCTTCCTCTCC
TCTCCTCTACGCGTCCACTGCTAGCAGCAGCTAGGAGTAGCAGCAACAGCAAGTAAAAGC
GATACAGTACAGCAAAGCCCAGCTTCGCGGTGCCGCCGCTGCACTGCATGGGGGATGATT
CCCTCCTACGCTCCGGGACCCAACACCACCCGCCGTAGCAGCTGCTGCCTTTCTCTTCTC
TTTTGGCCCCCGGCAGTATCAAAGGCCGGGGGTCGACATGATGCGCAAGCAGATGACAAC
GAGCGCCCCTCCCCACAAGCCAACAAATTACGTACTAGTAGGCCGGCTGCCTTTACAGTG
AGATATTTTCTACAAGCTCTCACTGCACAGCAACACTCAGTTTTCCAAAAAGGAAAAAAA
GAATGCCAGTTACTTGTTTTTTTCCTTTTCTTTCTCTAAAGCTGTTTTTACTCGACGCTA
GTTGTTAAACTATTTTTCGGACGGCTGTCCTTATTTAACTTATTTAAGTGTTTAGAAACC
GTTGATCTATGCATTTAATTCGAGAGCAAGATTTAGCATGCTTACAAAAATCAATGGAAA
GAAAGTATCAAAATGAAACCTACTCCTTTTTTTTCAGGGGAAAATGAAATCTACACTTGA
GTACATCCTTTTTTTTCAGGGGAAAATGAAATCTACACTTGATGAAGTAAAGGACAACCC
GGTGCAGATTTTTTTTTAAAAGGATTTTTATTACACGTAGATGTTATATCCATGTGAAAG
CACAGTGACAGCTCAGTCCTCCTGGTGACATGTGAAGTTCAGCTTCAGCCGGACCATATC
TTCCTGCCAATGAAGATCTAGTTTCATTATTATGCTTGTTACAAATTAGCAAAACGAATA
TTATGCAATTTCTACTCTCCAATTCCTGCCAATGAAGATCTAGTTTCATTATTATGCTCG
TTATAATTTAACAAAACGAATAGGAGTATTATGCAATGTCTAGTACGCTCCAGTTACCAT
TTGTTTCTCCGAGACGAATACACGAGAAGTGGCAACAAACCATCAGTAATGCTAACACTG
TTCTTGTGCCACTAATACAAATGCTTAGAGACAAAAAGCAGAGAGCCCACTGGGGCATAA
ACATTAAACAACGTGCCAACCCCAACCACAGTGAGTCGCCCCATATATACCGAGCTCCCC
TGTAAACCACAGCACCACGCACCGCCTAGCCCCGCCAACCAGAGCGGAGCATCTCTCCCC
GGCCTCCCTCGCCTCGGTGTCGCCGCCCATGGCCGTCGCCAAGAGCAAGGCAGGCAAGCA
CGCCGCCCCGCTGCTCGGCAAGTACGAGCTCGGCCGCCTCCTCGGCCGCGGCACCTTCGC
CAAGGTCTACCACGCGCGCTCCCTCGTCGGCGGGGAGGCCGTGGCCATCAAGGTGCTCGA
CAAGCCCGGGCTCGCCGCCACCGCCGGCATGGACGCGCGCGTGCTCGGCGAGGTCTCCGC
CATGCGCCGCCTCCGCCACCCCAACGTGCTGCGCCTCCACGAGGTGCTCGCCACGCGCTC
CAAGGTCTACCTCGTCATGGAGCTCGCCCCCGGCGGCGACCTCCTCTCCAGGCTCGCCTC
CCTCCCGTCGCGCCGCCTGCCCGAGCACGCCGCGAGGCGCGTCTTCCTCCAGCTCGTCTC
CGCGCTCATCTACTGCCACGCGCGCGGGGTGTCCCACCGCGACGTCAAGCCGCAGAACGT
CCTCCTCGACGCCGACGGCAACCTCAAGGTCTGCGACTTCGGCCTCGCCGCGCTCCCGGA
GTCCCACCGCGACGACGGCCGCCTGCACACCGCCTGCGGCACGCCCGCCTTCGCCGCCCC
CGAGGTGCTCCGCCGCAAGGCGTACGACGGCGTCAAGGCCGACGCATGGTCCTGCGGCGT
CATCCTCTTCGTCCTCCTCGCCGGCCGCCTGCCGTTCGACGACTCCAAGGCCGACATGTG
CAGGAAGGCGCACCGCCGCGAGTACACGCTCCCGGAGTGGGTGTCCCAACCGGCGCGCCG
CCTCGTCAGCCGCCTGCTCGACCCCAACCCAGCCACCCGCCTCACAGTCGCCGAGCTCTC
CACCCACCCGTGGTTCAAACGCTCGCTCAGCCTCGACTCGCAGCTCGGAAGCCTCCTCGG
CGGCGCGCCGGAGCGCGATCTCCTGTTCCAGGCCCCGCCGACGCTGAACGCGTTCGACAT
CATAAGCATGTCGCCGGGGCTCGACCTGTCGGGACTCTTCGGCGAAAACCGGCGGAGCCG
TGAGAAGCGGTTCATGACGACGGCGTCGCCGGAGCAGATGGTCGAGCAGCTCGGGCACTC
GGGTGCAAAGCTCGGTTACTTCATGGTGGGCAAGAAAGGAGTAGAGCGGCTGCCACTAGG
CGGCCTGTCGGGGCTCGTGGCCATGTCCATGGAGATGTCGGAGGTGGCGCCGCCCCTGAT
GCTCGTCGAGCTGAGGCTGGAGGCCGGCGACGACGAGGAGGTCGAGAAGTTCGGATGGGA
CGAGCTTAGGACGGAGCTTGGGGAGGTGGTCATGGCGTGGCATGGATGCGAGGAATTGTG
AGGAGTTGGGGGATGTACATGTATGATCTGATCTGATGCCAGAAAGAGCTAACTAGGACT
TTGTGGCAGATTGAAGGGGGTAGATTTGTTAGTTCATTCACTCTGATTTTGATGTTTGTG
ATTAGAAATTTTGTGGGAATGAATCTAGATTTTGTGCCTTTGTGGTGCTGGCTGTAGGCT
CTTGAATCTAATGATAATAGCCTTGCCTCATACTTCTATGTGCGTTGATCTTATGAAAAT
ATGAACACAGCCATACACTAATACACTGCATGCACCAAATTGGATCCTAAATTGACACAA
TGACATATATAAAAAAACTTGGTTGTTAGTACATTCAATCAAATTGATGTTTGTGATTAG
ACTTTTATTTTTAAGGAGATGCTGGATTGTTAGCTGAACCATGATTTGTGATGCTTACCT
TCAACTTGAAGCCTTGAATCTAATGATACTATATGCTAGCCTTAGGCGACATGATTCAGG
TTGTAACATAACATTGTTCGAACTCTCTGGAAGGTAGCCTACTTCTTTTCCTTTAAAAAC
TCCACATGCATAATGGAAACCTGAGGGCTTTCCAAAGACAATTAGTGCTGATAAATTAGT
GCCATGACAGCTACTACAAGGTGCTTCCTGCAAGCACAATAAGAGTCATTACTAACTCTT
CATAAATTTTTGACGGAGATTAACAGTCTAATGCACCACCCTGCTGGTACATCTGTCATC
TTCTTCCCTGGCAGGTACTACTACTACTACTGAACGTCTGAACCAGAAGAAAACTGCAGC
TCTGCTGCCTGCCACTGTCCCTACAAATTACGCACATATATAGCTGCTTATCCAGTAATG
GCTACCGAACGTAATTATTGACAAGATTTGGAAATTGAAAGGGACCAAGGAACGAATTCC
CTGTCTTAACTCTCAACAATATCTCAGCGCGTTCTTGTTTGTTGTGCTGGTCCTTTTCCA
TGTCAATTCCTTCATGTCTGTCCTTCAGTGGTGGCCTGATGATTGCCCATATATGGAAGA
GTCATCTGCGTCCGTCCGTTTGAAGCGCGGATGAATCGTTTTGCTGAAGAATATGCCATA
ATTGCTCAGGATGATTCGAACCTATCGACGGGTAAGCATCTCGGTAAAAGTAGTGGGAGT
CGTGGTCAAACAGAAGCAATCGATCCCTATAAGGCTATAGCTGGCGTGCACCATGGAAAT
GCATCTCAGAACAGGTAGAAAGGTTTTTAGTACTGCACCAAGGTTTACATGATCTTGGTT
AACACAAGTTATTGTGTTAAGTGATTAGCAAGCACATTCTAGTTTCACAAACACCTCGTT
TTATGTTAGCTGATCAGCATCATTGGTAAACCTATTGCCGGTGTCAGTGGGCAGTAGTGA
ATGAAAAGTCAGAGTAGATTCAGAAAGCCTATGAGCTGATCGATGTCGACGAAAGCCAAT
GGCTATTGGGTCAGATACCAGCGCGCGAAAAAGGAGCGACCTTGACATGGGCATCAAGGA
ATTAAGGAACTTGACACTGGCTTAGGGACAAATCTAAGTAACTTGCACTGCCAGCTTATC
TCCTACAGTAGTTTATTCTCTAAAGCTACTGTAATCTGGACTACGAGTTCTCCTGTCTAA
ACTGGTGAAAATGGAGAATGAGGTATTGCATTTGAGCATGTGTTCTGGCCGACAAGGCCA
TGAGAAGAAAATAGGGGCAATGGAGCTGCACGAGCAATGAGAGAGGCGCATGCATACTAA
TGTTGGTGTTTGACCATCTGCTGCCAATTCTGAATCAACAGACATTACAAAGAGAAGCCA
AAATAATCTTTTCTCGGTAGGTCTTTCGTCACGAATTCTACCTTCAGCGGAGAGGAAAAT
GGAGGGGATAACTACGGATGATGATAAACACGTACGAAGGCATATATTCCATGACAGTTT
GTGGCACGTCTGCACGTGCTAAATATGTATCTTTCATACTGTACAAGGGAGAGGAGACCG
TCTCTAAATTAACAAACCCAACAACCAGTCAGAAATTGCAACGACTTAAACATCTCATAG
ACGGAGCGAAAAAAATAGTAAAAAGGAAACCCCAAATGGCATATAAAGAGTGTTGAGAAA
ACAATTATAGACAACGAACAAGGACGCAAAATAGCTACTAACGTCGATGTAGGGATGGGA
ACTGGGTCCCATTTAATCTCATTTAAACCCACTTATTATCTAATAGTTAAAATATTTGTT
TTTTGAAAAAAATGAACTATGAAGCTAGAAAAAGCTAAATAAATGGAACTTGTGGCTGCC
ACTTATTTGCCATTTACATCCCTACGTCGATGCCCTCGTTTACCCTTCAGATTACACCAA
AGCAGAAAGGCAATATCTTGAAGGGAGGCACGCCACCGAAGAAAGATCCTGTCTTCTTTG
CTCCCAGTTGGCTAGACGCCATGAGAGTGGTAGATGTCTCCAACACCGAAGAAGGCCTTT
CGCCTTGCGCCCAGGATCGAAGGGCGCATTAGCGGGAGGGTAGTCGCATGAGCACTTGAC
AAGTTCTAAGGGTGCTGAAATGGCGAGCACGACCACGTCACCAAGAAAACAACCCATGGA
TAATGCCGCTTCCCGTGACACATATCACAAAGAAGACATAAGCATTAGAACAAAGTCACC
CAGAGAAGACATCGTTGAGAACACTGTTCAACAATACCACCAAGACAGGTTGGAGCTCTC
CAAGGTCGTTGGATCTCGTCACCACCGCCGAATTTTCTCAAATTATATACTCCCTCCGAC
CAGGTGTATAGGGCATGCGCGTTGTTCTAGGTCGTTAATTTAACTATTTAAATATATATT
ATATGTAATAAATAATATACCATTAGATTCATGTGAGGGTGTAGTTTCTGAATATGTAAT
TTTTATCACATATAATATATATTAAGTTAGTTAA
