| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_56320
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69366 |
1 |
463 bp |
AK366515 |
Not available |
Available |
None |
CDS Structure of MLOC_69366
Contig Sequence (10461 bp)
>contig_56320 10461 assembly3_WGSMorex_rbca.fasta
GCGGCGGCGTCGTGGCCGACGTCAGCGGGGGACGCGCCGCCGCCGCCGCTGGTGGATCCT
CCGAGCAGGGAGAGGTTCCCCATGCTGGCGCTCTTGCGGATGGATCCATCGGTGAGGCGC
ACCCCGAAGATCTTGACCCCGCGGTTGGGGCACGTCCGCGAGTTGTGGCCGTTGTAGCTG
CAGTGCGAGCACCGCCTCGTCATCCCCGGAGCCGCCAGCGCACCCGCCGGTGTAGCGCGC
CGGAAGGGGAGAGGAGAGGTGGGCTGGGAGGAGAAGCGAAGTGTGGTGGCGGTGTGGTGG
TGGTGGTGGTGAGAGCAGCGGAGAGGAGAGGAGAGGAGGGGATTGACTGTGGAGTGGTGA
TTGGTTGCGGTGGTCGGGGAAGGGAAGGGGGGAGGGAGGGAGCCCGGCGCGTGTGGCCGT
CCACGTGGCGGATATTCCCGCGGGGATATTACGTGGGTGGGTGGGCAAGAGCGGCGGGCG
AGAGGAGGATTGCGGGTCACGCCTTTTTCTTTCTTTGGACACGGTTGCTTGCGGTCGCCT
CCTTTCGTTTTCGCCGTTGGATCGTCGGATCCCCTATTCCTGTTCGTCGACAGCGCGAGC
AGCTAGCTAATTAATGCTTCCCTCCGGGTTTACAAATTACGACCACTCCTCGTAGTCTAA
AAATTGGCTACAAAAGGATATACTCCCTTCGTTCCAAAATTCTTATCTTAAATTTATTTA
GATATAAATGTATCTAGTCATGTTTTATATTAGTATCTATCTACATTCATTTCTAACAAA
CCTAAAACAAGAATTTTGGGACGGAGGAGTACTATTTATGACATGTAATTCATACTCCAT
TCGGTCTTAAAATAGATGTCTCAAACTTACTACAACTTTATATTAGAAATGGTACGGGGT
TGAAATTTTTATTTTAGAACGGAAGGAGTAATTTATTAGTCAAACTTTGATCCAACTAAA
TCGAAACTTCGAGTGGGACTAATCACCCGGACAGGGGAGTACATGTACACAAGAGATAAC
TTAATTGTTGATACTACTGAGCCATCCCGTGTATCCGGTTCCTATCTAGCTACCTATCAT
CTTTGCAAACTTTATATTGCAACTCAAATGATTCTTTAAAGGGAAGGTCAGTAGCTATTA
TGGTTCATCAGCATGAAAGAACTATATTTCATGTTACAAGCAACGTTGTGGCTAGTTCTT
GGGATAGACGAGAGGTGAGACGACTAAAATTGAATACTGATGGATCCGTTACGGAAGGTA
GTGCAGTACGGACATGATAGTTAAGGACCACGAGGGTGCCATTATTTTTAGCTCCTACGG
GTACCTCTTCACATGTATTGATATTTTGGAAGCTGCGTTATTAGCTATTTCTCAAGGTGT
TAAGTTGGCATTACAATGGAGTAGTCTTCCTGTTGAGATTGAATCAGATTGTCCAGAGGC
GATCACAATGATCAATGGTGGACAAGGAAACAAATCAAAGTATGCTTTTATTATTAGTGA
GATCATTAGTAGTATGAGTGAGAGAGATTTTTGCATTACTCATATCCGTCGAAACTGTAA
TAGTGTTAGTCATTTCATGGCCAACTTTGATAGGTCGCAATGTCGTACCGCAGTTTTGCT
AGGCTCTGGTCCAAATGAGGTCTTGAATATTGTTGAACGGGATTGTATCTCTTAAACTTT
GAGTAATGCAAGAATTTATTTGAAAAAAATGGACAGAGGAGTGCATACTCACGAGTATTG
TCTTTCTTTCATCTCGTCCCCTCTCTCACTTCGCATGTTCTTTCTACCACATCGAATATA
GTACCATTTGTGTACTCTTCCTTGAGTTTGTAAAAGGTCTTGCTTTCTATTTAGACTTCG
TCAGCTATAAAACATTTCGATTCTCGACCTAGTTTTGGCACCTTTGCTCGTGTTCTTAGA
GCATTTACAGCCGGATCCCTCGTACCTATCTTACTTAAAAGCCCGACGGACCATCCGGTC
ATTGACCGGTCATAAATCGTGATCCGACCGGACCTTTCAAACAAACCTCAAACGTTCGGG
TTGATCGACACTTGGGGCGAATATGAGGGAGTCCCGACATGGCCGAGCATGCCTCCATGA
CGGCCTCACGGCATGACCCCATTGCAAATTGCACCCAATTCATCCCGCAGAACAGCCGGA
TCCATTTGCTGATTTCCTCTCTTCTTCCCCCTCGCATCGTCTGTCTCGCAACTCCATCGT
CGTTCGTAGCCTCTACCCCGCCAGCTTTGTCATAGGAGTCTTCTATCCCATCCTCGCCAC
GGAGGACATCGTCGTCAGCCCGGGAGACACCGCAGTACGTCTGGCAACTCTATGGTTGTG
CCTTACAGTGAATGTGTTCAACACAATGTCTGCCCGGATTTTTTGATCAATTTTTTAAGG
GGAACGATGAATTCCGATGCTTCGTCCAGCGAGGAGTAAACAAAAAAAATGATGCTGTCA
AAATGCTACTTTCGAAAGCATTATGAGATCACGTTCGAGTAAGGCGTGACAAAAAAAACA
ATGATCTGAAAATGCTACTTTCGAAAGCATTTTGAAACACTGATTTTGTTTTTTTGCCAC
GCCTTACACAAATGTGATCTCATGATGAAAATTTGTAAGCACTTAGAACATTTGTCAAAG
TTCATCATAAAAAATCAGAATTTTTTGAACCGTTTTTTTATTTTACCGTTAATGCGGGTG
CATTTGAGCTTGAGTTCAAAAGGGTACTTTCTCATTTGTGTACTCTTTCTTGAGTTTGTA
CACGTCTTGCTTTCTATTTAGACTTCGTCAACTATAAGACTTTTTGATTCTTGAGCTAGT
TTTGACACCTTTGCTCATGTTTTACAGCCGGACCCCTCATACCCGTCTGACATCCGAGCA
AACAACCCGGTCACAAAATCACGAACCAACCAGACCCCTAAAACGGGCCTCAAACGTCTG
GACTGACCGGCACCCCTCGTATGGGGCGGATATGGGGAGCCCGGGCACACCCGCCACATC
GCCTCACGGGGTGACCCCATCGCAAATTACACCACATCCGCCCCGCAGAACAACCGGGTT
CATTTTTTGTTTTCCTCTCTTCTTCCTCCTCTCGTCGTCTGTCTCGTAGCTCTGCCGCCA
CGCGCGCTTCGCTGTCGTTCGTAGCCTCTGCCTTGTCAACTCCGGCAGAGGAGTCTTCTG
TCCCGTCCTTGCTGTGGAGGACGTCGTCGCCGGCCCGAAAGACACTGTGGTGCGTCCGAC
AACTCTCTGGTTGTGCCTTGCACTGAATGTATTCGACACAATGTCTGCCCCGATTTTTTT
TGGTTAGTTTTTTAGGGGAAACAATGAATTCTTATGCTTCGTCCGGGGAGGGGTCTGGAT
TGACAGAGCTTGATCAATTGATTGGACATGAGTTCTTCGATTCATCAGATTTAGACGAAG
AAGTGGACATAATCATGCTCATGACCATGCAAGAGGAAATGGCCCGGAAAGTGGAGCATA
TTCTCAATTTCAAGGGCTCAGTCAAAGGGGGGAGAGTTATCAATTGGGATATGGTATCCG
GAGCAAAGCTATCACAGAAGCATTACTTTGCTCCGAACCGAACTTCCCGGGATGATCCAT
GGTTTCATCATCATTTTCCATGCAAAAACCATTGTTTTTGCGCATTGTAGAGGTGGTGGA
GGCACACGATGACAACTTCAAGAGGACAAGGGATTGTTGCGGTAAACTCTCTTTCTCTGT
CAAATAGAAGTGCATGTCTACTCTGAGAATGCTTGCACTTGGTATTGCGGTAGATGTCAT
TGGTGAGATGGTCATCATGGGGGAGAGCACATGTCTGAAGACTACTGTGAAGTTTGCCCG
TGTTATGGTGGAGGTGTTTGGAGTAGAGTATCTGAGAGAACCAAAAGTGCAGGACAAAGA
TAAGTTGTTGGCTATTGGAGAGGCCAGAGGGTTTCCAGGAATTCTCAGATCAATTGATTG
CATGCACTGACAGTGGAAGAACCGCCTCCAAAGGTTTGCAAGGAATGTATCAAGGTCACA
CCAAAGAGGCCACCATCATACTAGAAGCGNNNNNNNNNCATGACTTATGGATTTGGCATG
CTTTTTTTTGGAATGTAGGATTCTCACAATGAATCAACGTGCTTCAATGATCTCCGGTGT
TTAGGAGGCTTTGCAATGGGGATTCACCTTCGTGCAACTACACCTCAACTGCCGAGACTA
CAACATGGGATACTATCTTGCTGATGGCATATATCCTCAGTAGGTTGCATTTGTGAAGAC
CATATCCGAACCACACGGCAACAAACAAAAGCACTTCGCAACAATGCAGGAAGCAGCTAG
GAAGGATGTGGAGAGGCGATTCGGAGTGCTGCAAGCACGATGGGGAATTGTCCGTGGGGC
TGCACTGATGTGGGAACTAGAAACTTTGTGGCAGCTGATGACATGTTATGTTATTTTGCA
CAATATGATCGTCGAGGATGGGGGTGATGGTGTAGCTCAAACCAATGATTTTGAAGCACC
TGGAGAACAAGTTGAAATCCCGGAAGATCAACATGCACTTCAGCTTACGAAATTTCTACA
CATGCATCAGAATCTTCAAGATCATCACGTGCGCGCGCAACTACTCAATGATCTGGTGGA
GCACATGTTGACCAGCAATCGAAATCAAAGAGGGGATGATTGATTGTGCATGTCAAATAG
ATTGATGTAAATCCTATTTATGTTTGGTACCAACATTTATTATTTACGTGTGACATTAGT
TGGTGTGATCGATATGCATGGTTTTGCATGTATTTGAGAGTCCGGATATGAGATATGTGG
ATGCATGGAACGATATATGAGGAGCCATCCGGACGCGTCCGCGGGCGTGCCCGTGGAAGT
ATAGGGGGCCGGATTTGACTAGTACGGTTGTAGATGCTCTTACCCTTTGGTGTCACTAGA
TGGTGTGTTTGCAACCACACTATATGAAAGTAAGAAAAAATAACTAATTACGTAGAGGCA
GAAAATAAGCTAATAGAGCTAGCATAGCTGCCATCACTTTTTTTTACAAAAGAGCAGGGA
ATGTTGATTTTCATTGATGAAGAAGGATAAGTGGGTTGTGACTATTACATTGATTAGCAC
CAGCAACTAACTATAGAAACCGGCTAGAGATCACTCAAGGTGATAAAAAAACTTGGACAT
CATCTTAAGCCCCCCGTGCAGCTAACACCATTCCTCATCAAGTATCATGCTATGAACCTA
GGTCACCGAACTTTATGTGGTGTTAAAAATCCTCGTGTTTTGCTCCTTCCATAGGCACAA
GGTGAAGAGTAGACACGCAACCCTATAGGTGTGTTTGTTCACCTTTGGTAGCGGGCAGGT
CCGTCTTTGAAAGCGATCTCGAGTCGTTGGCCTTCATGTTGATGTCTGCACAGGAAGGCC
CCAAGGATCTCGCTTTTTCCCAAATCTGTGTCGAGAAGGTTCACGTGGCGATAAGCAGCC
ATCACTTTGTCATATACCCTCACGACTTCTCCCCCCTTCCTTGTTACTAGGTATGCCACG
TGTGACCTCCCCCAAGTCTTTGCGTGCCAATGTCCTTTGCTCGCACGCAAAGATAAAGCT
CAACCTATAAGCATGCCATACAAAAGAGACAAGGTGCATGAAGACGACAACAACCTCACG
AGTGGGGAAATGTAGAGACGATCTCGCGATTGCGGCACCGCGAGTAAGAGAACATAGAAA
GTAAAACACTAGAACATGAACCATACACATCTTGGTTTCTTACGTGGCATGTGTCAAGTC
GCGTCATTCTGATACCATGTTTAAACCCGGTTAAAGGGACACAAGCAACACGATGGGTTA
AATTAGAATGACTTTAGTAGGTTAAACTCACAAGTTAGGTGAACTCTTGCAAGAGTTCCA
GGTTGCAAAGTGGGAATTATTTTACAAAAATGGATTACTTCCTATCTCGATGATGACTAT
GATTTTAGAACAAGAAAATCAAAATATTTGATATGTTGTGTTGTCCTCGATTTTTCTGGG
TGGTCGGAGCCATGCCTCTGCAACGCACAACGTTGGGAGTTTTGGAGCTGGAGACACACG
GTAATAGGCTCTGGATGAGCTAACGGTAGATGGTGTTGGATCAAAGAGATGTCATGTTGT
GGTTGTAGATGTCGCAAGAGGGCTCCTCCTAGGGCCCGTCATCCCTACCAGCCCTCGGTG
TTGAGTGCAGGAGGATTTAAATTTTCCTAGGTGGTTGCTGATTGAGAACTTCACGCACGT
CTAGTGGATTGCATTCCATCTCCAAGTTCCCTTCCTTTTCGACGCCCGACCTGGATGAGC
GAGGTGAGTTGGTGGTCTCTCGGCTAGGAGGTCATTACCTTGGGTATGAAAGACGATCTC
TTCTTCGGTAATGATGTTGTCAATGGAAAACCCATCTTCTTTGAGGTCATCACCACACGA
GGCCGCCTACTCGGGGTTATGAAATGGAGTTCAAGTTGTCACGCGCAATCTGTTTGGGAC
CCACGGCGGGCACACAATATCGACAAATAATGCTCCACCTAACTTACAATGTGGAAGTAG
TTGTGGAAGATGTATAGATAAGGTGGTCCTCTGAGGGATCTCGTTGACTATGATGATTTG
TCTTCGTATTTTTATCAAATAAGATCATTTAGTGAATAGTATGCTAATAACAAAGAAAAA
TGTTAAACATAGAGCTATCTCCCATTAACTACGCCATAAAAGAGTTTAATTACCTCCAAG
TGCAAGGGATAATTGTACTAGCATTTTCCAATTATGAATAGGAAATTATTGATTGTCGAA
CCCCTAGTAGCTAAAGTTAGGTTTTTTATTCTCTCAACTTTTGTATGCGACTTACACAAT
CTTTTGTGATCTTGTAACGTTTACTTTACTATAAGTCATGTTGAAAGGAGTTTGTTGCCT
TGAAGAGGCAAGTCAATCAAAGTTATGTGTTGTTATTAATTCGTTTTCAATAATTAAAAG
AGTGAGAGTGTGACTCTCTGTGTGTGAGGGTAGTTATGTTATCCAATGGAAACAATTGTT
CCAAGCAACTCCATGTTTTGTGTGTATGTTGTTGTCTTTCTTACAATGGGATTCTAAACA
TAATGAAATATGCATTTCAATTTTATGCCCTTGTGATTTCTCTCCAATGTCACCTCAAGG
TACTCTCACAATGTGGATAGAAAAGACACTCATTAAGATGAACCATGTGTTTCCCTCCAT
AAGTGAAACTTGTATTTACTTCCAAGGGTGAAGCCTGACTTCACTACTACAAATCCGAAT
AGCACTAGCCCCTCATCGCTGGTTGTTCATTGACCACACGTCATTGAGGATCCTTAACAT
TGACTGGCCTATTCGGATGCATCAATGATATTGATATTTGGGATCAGCTTGATGGTTATC
TCAAACTGGTCATTTCCCTGCCAGTGATAGCATGCCCCGATGATCAAAATGCACCAAAGG
TAATCACTAATCGCACGCTATCTTTGACCCATCTGTATAGCCCATTTAAATCTGACCCTT
TGCTTTCCACGCCTCCTAGTTTTGTTATGTATGCATCCTATTATAATTCATCGTCCACTC
CCTGTCTCCATTTCATACCCTCACAAACATCGTTGAGTCCCTCCATTCTGCGGGCCTCCC
TCTTATCCCTCCCCATACCTTCGGCCACTAATCTATGGCGGCATGTCTGATATCCCTACT
GACTTCCATCGTGGTCACACCCTCCCGATGCAACATTTATCTCTACTTAGAGGGATTGAC
TTGTGCCTAGCTAAATTACCTCCCTGAAAACACGACATATAGTTGGGGAGATCTGGAAGA
TGCTTTATTCAAGAACTTTTAGGGCACGTACAAGCGCTCAGCGGCTAACAAGATTTGATG
CTTTGTGTGGGTTGGAGTGTGTACTTAGGACAACGTGGATCAAGGATACCATATATTTTG
AGTTCGGCTATGGGCTAAAACACTTTGTCAATCGACAAGCAAGATCATGCGAGAAACACA
AGGGGATTGTAGGTTCATGCCACTATCTCAGCATAAAACCCAATTTCCTATTGTCATTAT
ATGAATGGGCAGAATACAAGTGCTCTTGTGTTACATATATGATGATTGGCACTACAAAAA
AACACTTCCGTGACATTATGACCCAAACAAAAACTTTTTCCATAAAGGATGTGACACTTC
CATAATGATAATTGTGACAAAAAACACGTATCATCATGGATATGGTGGGCTCCTAGTTCT
ATGATAAAAAATTATAAAATAAAATGGGGTTTTTCATCCTCGGCGGGCCGAAGGGGGACC
TGCATGACATTCTCTCGGTGGTCCATGACAAAAAATCATGGTAGAAGTGAGGGCGAGAAT
TTTTTTGGGCATTTCCCGGTTACGGTGGGAAATCGGTGGGTGGTTAAGGCTGGGAGATGC
AGTGTGGTTCACAAGTTTCTATCATAGACGTGCGTTTGTGTGAGGTGTTCGCTTACTGAA
CGAGAGCGATCAATCGATCCCTCGCACTACTTACTGAGCACGAGCGATCGGTCCCACTAC
ATATTGAATGCGAGCGATCGATCCCTTTAATGCTAACTGATTCCTTCGCTGCTAACTAAA
GTCGATCGATCCCTTCACTGTTAATTCAACCCGGGCGATCGATCCCTTCGCAACTACTTA
CTGAAGTCAATCGATTGATGCGATGCACCAATCCCCTGCACCACACGTGAGTTGAGCTAG
ACGGTTGATTGCCTCTCGATGAATAGTGCATGTAGTTGTCGCGTGTGGAATATGTAGTAG
ATCGAGTTGAGACTTGCATCGATCAAGCCCCTTGCGTGAGATGTGGTTAGTTGACCTAGT
CGGTTGGTTAATTGTGCATGAACAGTTCCCTGTGTTGTCTGATACATCCATTTTGCATCA
TAATTTTCTACTATTATTTATATGTTTTGGTCATTATCCCACTTTATAATGCAATTCTAA
TGTGTTTTCTCTTATAATTTACAAGATTTACATGGAGAGGGAGATTACCGGCAGCTGGAA
TTCTGGACGTGAAAAAGCTACAACAGAGATACATATTCTACAGAAGTGCAAACGACCTTA
AAATTCACGAATATTTTTTATTAAATATGTAAAAGATACTGGAGCAAAGAAATATCAGTT
GTTAGCCGCCGCCAGCATGATATTTATATGATGTTGTTTGGTTTTGGTTTTTACTGTGCA
CACTAGCCATTTGTCCTGGCTGACGCTTGCGGCTGCCACCACTATGTGGAGCTGAATTTG
GAGTGTACGAACATCACACATGGTTAGAGTAGCACACATGTGGTTGTTGGCGATTACATG
GTTAGAGTAGCACACATGTGGTTGTTGGCGATACAATCGCAGACAATTGTTTCATCAGAT
TAGTTTGCTATTTTAGATAATAACATCATTTGGGGGAAACGACAAAAGATGTGAGAGAGG
GTCAAAACACAACCACACCAGCTAGTGGCCCAAATATATACTCCCTCCATTCCTAAATAT
ATGTCTTTTTTAGATATTTCACTATGGACTACATACGGAGCAAAATAAGTAAATCTACAC
TCTAAAGTATGTCTATATATACATATGTGTGTAGTTCGTAGTGGAATCTATAAAAAGACT
TGTATTTAGGAACAGATGAAGTATATATCTACGAAGAAGGTGTTGTCATGTTCAAATTCC
CAATGCACAACTCTGATGTGACACATGATGCATATATGCATGCCTAAAATTGTCCAGTGT
GACAGAAAAGGGCTCATGACATAAACATAGGGTATTGGCATCTACACTATGTGCTGGAGG
AGAAAATCCTATGAACACATGACCTGGCTCAAACTTTGTCACACATTTACCATGCCTAAC
TTTTTGTTAAATAACCAAGAGAATATATACCTTATTTTTTTTTCAAACCATCACCTCTTG
TTGCCACTCAAGAGAGACGATATAGACCGCGCGGGCCCAAGAGTTGGCGCGTCATCGAAG
ATAGGTTGAGAGGGACTAGAAGAATACCATCACCTGGATGTGAACAAATGTATATAGTAA
AAGGATGTGGTCCTATGTTTAAATACACAATGCACAACACTATGATGTGGTATGCACTTG
GCTCAAAAAACTAGCCATACCCCTTGGTTATATATGTATACTACCTAGGTTACACTTGTA
TGGTGCCCCCACACCCACCCACGTCACACACGCAACTAGGGTGGCGTTCTAGCATTGTGA
GTCGAAAGGATGACACATATATATAGACCCTAGGGGCCCACTGGTAGGTGTGTCGTTGTC
AAAAGTCTCACAAGAAAGCATGGTACGCACACACAAAGAGAGAGAGAGACATGCACACAC
ACACACATAGAGAGAGACACTTAGATACACACAAACGCACACACACACACACACACAAAG
GGAAGGGAGGGAGGGATATAGAGAGAGAGACACATGCACACACAAGCACACACGTAGGGG
GAGATTGTTAGAGCATATATC
