| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_5625
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69320 |
1 |
3036 bp |
MLOC_69320.1 |
Available |
Available |
LOC_Os08g38570.1, FRAME:-3, EVALUE:0.0, 13108.m04093 protein WD domain, G-beta repeat domain containing protein, expressed |
| MLOC_69319 |
1 |
848 bp |
MLOC_69319.1 |
Available |
Available |
LOC_Os07g09040.1, FRAME:-2, EVALUE:1e-11, 13107.m00906 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
CDS Structure of MLOC_69320
CDS Structure of MLOC_69319
Contig Sequence (8441 bp)
>contig_5625 8441 assembly3_WGSMorex_rbca.fasta
CTTCTGGTACGTCGACTCCTGCTCCTTCATGTCACAGTAGCCCTGAAACCGAGACTCGAT
GCCGGCGGCTCGCTCCTCGAGGGCCGACACCACGCGCTTCAGGCTCTCGACCTCCTCGGT
GCCGGCGGGGGACGTTCCCTGAGCGTCCTGGAACCTCTGGTTGTTGACTGAAACTTCCGA
TGAGCTCTCGGTGTCCTGCGCCACCTTGATTTCCTCGGTAAGAGAAGCCTGCCTCGCGTG
TCCACCGCCAACGAGCCTGCCGGTGCTGTAGGGGGTCTCTGCTTGCACCAGCTTCCGCGA
CGCCGCCGGAGTCGGGGACTCCATTTCTCCTCCTGCCTCTTCTTCCTGAATCAATCTCAA
ACCGTCTGACGATGATTGATCCAATTGGATTGAGTTATCAGACGAGTCTAAGCCACTGTG
CCTGATTGCTCTATCTGCTATGAGGCCGCAGATAAAAGAACCTGCCAGGGGGAAAGCCAG
GGGAATTATTATCTTGAGAAGGAGATTCTTGATATCCTCTGCTTGCTTGCTTCCCATTTA
GAAGGTTTCGTCATTCCTGCAGACAAAGCTCTTTAGTAGTAATATATCTGGCCGGTCCCC
CACCCGGTAAGTCCTGACTTGCTTTGCCTTGAGGGCTAAACTATGCCAAGTTTCTTCAGG
TCTGTAACCCAAGAACGGCTGCTTGGGTGACATCGAGTTTCAAGACACGGAAATTTTTGC
TTCTTCCGTGTGATTTGACGGCACTAAACACATTAACTGTTGAAGTTGGTCACCGATTGG
GATTCATCATATCTTTGCCTTGCAAGGCAAGGTTAGTATCAGTATCGTCTTGTTTCTTGC
TTGAGAGACGAGACGAAAGCACAACCTTAGCATGCACCGGATGCAAAATCTTCCCAGTTT
GTTTGGAGTGTACAAGATCGTCACCTATGGGCACCGGGAAACCTTTCCTGGTATATGTTG
GTTGCTAGCTACCAGCATACGTGTAGCAAGCAGCCTTCACTAATTGTGCCACGGGTGAAG
TCTGTGATGTCCAGATTGCTGTGAGGTGGCTGTTTGCGTATGCCCTCTTTCACAAGTATT
CTACTATATGTGTTCTATGTTGAAGCTTATTGTGCACTCAAGCTATGTAATGTTATGTGC
AGTAAAGCATGGGAGGATGTACACACACACACACACAAAAGTTTTATTAGATCGGGAGGC
AATTTCAGACACTGATACAAACTTTCAGTGAAGCTGACAGGAGCAAAGCTGCAAAGGAGC
ATAAACTTCCATGCATGCTTTACAGTGTCAAAACAGGTCTTACATTTTTTAGACGGGGAG
TACTAGTGAAGCAAAACTATTCTTTTGTGTTAGACGCTGTCAGCAGTCCAAAGCTTCATA
ACTCTGGTACTAATTTTTTGTTGATTCCATCAATACAATTGCCCGATTAAGAATACTGTC
AGCAGTCCAAAGCTTCATAACTCTGATACTAATTTTTTGTTGATTCCATAAATACAATTC
CAGGGAGTATATATACAATTGCTATATTTTCCAGTGTCGTACCTTCGTCCGATTACTTCC
TGCATTGCTGCTGGAGCCTGGAATGGTTGCGTGTAGCTGTCTAAATATAGTTGGACAAGT
ACATGGTGGATCTCATATATGGAAAATATAGTGAACTTTATAAAGTTGTTGCAGACATGG
ACAATACAGGGAGCAAAAATTATGCAACAATGTACCAGTGCTAGAGTTCTTTAAAAAAAC
GCAAGGCAATAAGAATACTGTTGTCCAGTTAACTATGGAAAAGAAGAATATTATTGTCCA
TTTAATTACGAAAACCAGGCAAAAACCGATACAGCAAAAGGCCAACCCCACTCTAAACCA
CTAAACAGGTGAAGATCACAATCACCGCCGACACTGTGTCGAACGCCGCAACAAATGTCA
ACCACACAAACACATGGAATTGAAAAGGCCAACGCACTGCATTCCACGGTCAACTAAAGT
TTACATATGAACAGCTCAGCATATGCTTTGCAATATAACAATATTATCTCACAGACAGAA
CCACGTCAAGGAATATGCCAAGGGCACCAAGAACAGCCAGGATTTTAGTCCACTAGAGCT
AGACGTATACACCTATGTCCTGCCGAGAAAATAGATGCGGGTGCTCAAAATTTCGGAGTC
GCAGTGTTGCATAAATACCTCAACTATCACGGACTGCAAACACCCTGACGCAGTGATCAG
CTCCACAAGAAGCCAGCTCAACTGCTGCTTTCTCAACAGCTGAGTCGGGTTTCTGCCACA
GCAGACGGTGCACGGTTGACACGTGACACAACAGAGGATCAAACCGGAGCATGCATGCAA
CGTTGAGGGGAGACCGATCCGAGCTACTGTCTGAAGCAGCTCTCCCCCCTGAAACACTCC
AGAGCTCGATCAGTCCATTGTCCATGCCAACGGCAATAATGCCGGCATTACGAGCTCGGT
CACGGCCCGTCCAGGCCAATGCTGTGACACTCTCACGGAATTGAGGCAATGTTGCGAGCA
GCTTGACTGAAGATGTGTCTTGAACACACCAAATCTTGACAGTCTTGTCCCTTGAACCAG
TTGCAAATTCGTATCCAAACGGGTTCCACGAGCATGCCCATATGATTCTTTTGTGTGCTT
CATGCTTTGTAACCAGGTGATGCTGCGCTCCTTCCTCTAAGAGTTACATAAGTGGGATGA
CACCAAGAATGGCAGAACATAAGTACTTGATCCAGTACAAAAAAGAAGGCAACAAATTAT
ATATGAAACTAAAAGATACAAATCCCTCACCAGTTTTCTTAATCGAAAAGACAGACAAGT
GACGATCCCTTGATACGCTCAGAAGAAAAGCATTATCAGAAGAAAATTCCATTTGTGTGA
CTGTCAGATTGTGAGACTGCAAGCGACCAACAGCTTTCCATGTTCCAACCTCCCAGAGCC
AGATCTCAGCAACTGGTGCTGATTGAGCCTGCAAGAGAATCAAATATCATCCAGAACTCC
CTAGTAAAATATAGACATTCTCCATCAACTACTACAAGTAGTCATATGGAGACAAATAGT
ACTGTAATATGCATTCTGGCCATATGAGGATGCACAGATACAACACTATTTTCCTGCGGC
AGTGGCAAAACATTTAAGTGGCTCCCAGAAATAAATAAATAAATAAAGCCCCAGCAATAC
TATGTATCCATTCAAGTTTCAATGAAAATGAAAAACAAGCATCTGTTTGCAGATTCACAT
TTGAGCAGTTAGCGTACATGCTCTAAACAAGAATAATCAAGTAACATCACTGTGGCCAGG
TGAGGTAAATGATCATTGTGATGATGATGTCTGGCTGAACACAGCTGATACTGGATATCG
TACAAAAATTGCGGTCACAACAAGAAAGCATGCAGTAATACCTTGCACGACGATGCAACA
AGCTTCCCTGCATGATCACAGCAGATGGAAAAGAGTTCATTTCCATGCCCATAAAGTTTG
TGAGATTCAGGCCATAAGGTATTCCATGCCAGCTGGTCCTCGACAGGAGGCTCAGTAAAC
ACAGTTGGCACTGCATCAGGAATCGTCTCCATGGAATCTGGACCATCATTAGAAGCGCTG
CTTGGGGATTCCTTTCCTGCATAAAACCATCAATCAAAAAGTATCAGTCAAATGAAAAAG
AATTACTGAAAAAATAAAGTGGGTACTACTAGAATTTGTTATGAAAAGCTAACAAGACAC
TCCATATGAGGGATTTTTACCATGTGTATATATAGGTTTCTGTGAAAGCCCAAGAGCAGA
CATATTTGCTCCAAGGACTTGCACATCGTCAAAATCCTCATTGTCAGGTTTCAACAAAGT
TGCTTCCTGTAGGGTCTTCAGGAATGATAAAGTAGCTTCAAAGACTCTACAGACCTTTTC
ATCAGCACCACAAACAAACCGGTGGTTTCCTGCACCCTGAATGAATGTCACGCAGTTAAT
GTCATGCCCATGGATTTGGGGGCGAGCAATTTCGCGCCAACAAATCACATCTCCTGGGTT
AACATGACTTCTCCAAGGAGCAAATATGCGTGCTGTCTGCATAATAAACATCGATGCAAA
ACAGGATTAGCAAGTAGTACACAAAAAATATAATCACACAAAGATAAATGTTCTGTAATA
CTGCACATAAGCTGAAGTAAAAGAACCTACCTGGTCATGGCTAACTGTTAGCAAATATTC
GCCGGATCTTGACCATGTTAAGTCAGATACAGGTGCAAAATGACCAGATGGGACAATCTG
GGGCTTCCAATTTTCAGAATCCAGTCCAACATCTCTCCACATATGGAAAAATCCACCATA
GCCATGTGCAAGAATAGATTTACCATCAGGTTCCCAATGACCACCATAAAATCCAAGTGC
CGAGTGACTTAATTCACCAACTGTCACTGAATTTATCCAAAGGCCGGTATTTTTTTCTGG
CCTCCATATCATCATCATCTTGTCCATAGATGCAGATAATATGCTCATTGGCTGATGAGC
TTCACCGCCAAGTAGCAGTGTAGGAGGCTGCCACTCTACTGAATATACCCAATCTTCATG
CCCAACAAGAAGAGACTCCAATGAAACTTGGTAACTTGTATTACCGGCCACAAATAGAGG
ACCCTCAATGTAGGAGGCCATCCCAATATTATCCTTCCTTTGTTGCACATCTGAAGTCAT
CTTCCATATACGAATGGTTTTGTCCTGAGACGAGCTAACGAGAAAAAGGCTGTGTTTCTC
ACTGCTCGTCATCACAGGTAAAGAAAAGTCTAAACTTCTAATCCAGTCAGAATGGCCCTT
AAGTTCACAGGCTTTAATGAACTGTGCGTCATAAAATGCTGGTCAGTACAAGAAACGCGA
GCAGGTATAGCAATGGAAGTAATAAGCAATCTTACAAACCTTGCCTGACTGATCCCCACA
ATATATATGGACCTTATGATCTAATCCTCCCATTGCTAAAATTAGGCAGCCTTCCCGTTC
CGGCAACACCGCTAATGAAAGTGAAACCATTGGTTTTAAACCAACAGAAAGAGAATGCAA
ACAAGATAATTTGCAGCAGCCTGCAGAAGTGAAACCAAATAACATAAATGGGATGACAGA
ACATTTACAGCGCTTCAAGATCATGCAGGTTAACAGAACTGGACTATAAATTTTGCTTTA
GAGACAAGCTAAAGATCGATCAGACTATTCAAGCTTTAACCAATAAGATTAGGATCCGTG
TACAAAGTATCAAAATGCTAGTAGATCATCTTACCACCTGCAGTCGGCTCAACCACCATT
TCCCAAATAACCACCATACCATCTGAGGACGTGGAAGCAAAAATTGAAACCTTATCCGAC
ACCATCCTTCCAGCAAGACAAGTCACACCTTTCTTATGCATGGCTGGTAGTTGCAGAACA
TGAGACCACTGCAAAGCAGACGTAAACAGCAAAATCAATCAACTTGGGTCAACTTAATCA
AGATAAACAGATAAACATATTCCAAGCAAGCACATGAGAAGAAGAAGAAATCTGACGCCA
CGAAATTTCAGCGAAGGCTTCAAACAGAATTCAAACGTCAACAAACAGATATATGGTGAA
ACGGAAGAAATTCTCACCTTGCCTATTCCAGAACCAATCTTCCATGCCATAATAGCACCA
TCAGAACTTCCGGACAATAGATAGTGTGTCTCCCTGCTTCGAACTGCAAAGGGGCAAATG
AAACAAACCACCAGCCAACGGTTCAGTACTCGTTACAGGATCAGTCCAGAACACCTTTTG
CTTGATCTACCTCCTCTCAAGTCCCACCAATTATTCATTGAGACAAATTCCAGGTTGATA
CTCTAATTTTCACCTCAAAATGCAGCTCAGCGCATAAGCAACGGCACAAGACATGGTATT
GTTCCAGACGGGTTATTACTCTAGCTAATCATTTCAGTTCAGATGCAAACAGAAAGAGGA
TTAACTATTAAGAGAGACGTAGAACAGGTTTAAAATGGAGGCAGCAGCAGACCTTGGAGA
ACATCCTTCTTGGTTGGCAGCCACAGCGTGCAGTTCACCGCCGCCTTGTGCCCCGGCAGC
GTCGTCACGATCTCCCCTCTCTGTTCCAGCACAGACAAGAAGAGTCCAATCGGATCAAAC
AAATGAAAGATCAGAATACCTGAAAAGAGAGGAGTGGGAGGGCCAGATCGACGGACCGAA
GGGGAGAAAAGGGCGACGGCGTTCTGGGCGCCGAAGGCGACGAGACCACAGGCGCCCCAC
GAGACGTTGTTCACAACACGGTTGCATCCGGCGCCGATGAAGACCCTCTCCGCCTCCACT
CCCCCGCGAGCTCCGGCTAGCTCCCCGGCCGCCGGCGGCATCGCGACGGCAAGCAGGCTC
TAGCTAGGGTTCAGGTTCTTTTTTTCTTTCAGGCGCAAGGGTTCAGGGTTTCGTTTACTG
CCGGGGCGGACTGGCTCAGCCACGCCAAGGCTTAACAGGCCGATCGTGTGGTAAAACCCG
CCCATGACACGATTTTTGAGAGGGAAGAAAACCAGTTTAGCCCATCTGCTCATAACTCTT
GGATAACGCGTACCGGAAGCAACTAGTTCACACGAGCGCTTCTTCGATAGCTTCTAAATA
ATCACTTTCACGTGCTATTACCTGACGCGTTCTTAACCGTCATCATGTATCGCGTTTTGA
ATCAGAATTTTATTATTTTATTTTATCGCACGTGTTCTCGGTTTTTTTAATAATTTTTCG
AGTTTTTTTCAGTATTTTGAATTTTCACCGATCTATCTTAGCTTTTGGATGAAAAATAAA
ATTCTTTTTTATGGGAGACACGATTTTTGCTTTTACGGAAGGCATGCTCATTCTTTTGTT
TTCTGTTTTTTTACGAGAGGCACAATTTTGTTTTCGTGAAAGGCACGGCCTTTTGGAAAC
GAAAAAACGCATTTTATGTTTATTTTTTTCGTAAGAGGCATGGTTTTATTTTCGTAAGAG
ACACGGCCATGTCTCTCAAAAACGAAAAAAAAATTGTTTGTTTTTTTGCGAGAGTCACGG
TTTTGCTTCCACGAGAGACATATTTTTACCTTCACAAGCGTGTCTCTCGGAAACGGAAAA
AACATGTTTTCTAGTTTTTTCTATCGTAAGAGGCGTGGTTTTTTACATGATTTTTTTGCC
AAAACCTATCAACATGGGATCTAGTTTTCACAATCTCGACGGTAAAAATGACTCAAAATT
TGGTCGCATGGTTTAAGAGATAAAACTTTTTGAAAATACGGATCTACGAAAAAACATATT
GCGATAAGTGGCACACATGCAGTGCGTCGCTTGTCGCAACGTGAGAAGGTGAGAGTGATC
TTTGAAAGGAGTATTCTTCAGTTAATGATTCGATAGAGACCACTGCTCGAAAGTCCTCAC
CTCACCACGAGTCTTCTCAACAAAAAATGATCAAAAGCTCACTATTTTTTTTTGCAAACT
TTGATAGATATTTTCAATGCTCGCAAAGTTTTATCATATGGAATAACATCCATGAGAGTC
ATGGCATAAAAAGCATTCAAAAATGGGCTCACGACTTTCACAAATGTCATTTTATCATGA
AACTTTGCAAACACTGAAAACGGCCACAAATAAATCATTTTTTGGACTTTAATGTTCACT
CTAAATTCATTTGAGTTTGAGCTAAGAAGCATAATGTCCTCATTCGACTCTCTATTTGGA
GGCTAACGGATATTTTGCAGCATATTTCATCCAAAAACGGGTTTGTCCTAAAGACATTTC
CCCTGTAGCTCCTCTATCTCCCTATGATATCGCGTGCCTTTCTTCGTAGTAGTGTCGCCT
CCGGCTACCGTGGACCTCTTCAAAGAACCCATGGGTTCTATCCTTACTCTCATGTCCTAT
TTTGCTGGTGTCCGACGAGATCCCATGCCTCCTGCTCTCGATCCATCGTTAGTGGGGCGG
CTTGTGAGTCTCGAGATCCCGCGTCAGTAGGATGACATCCTCCTCCATGTCGTCCCCATA
CACACCCACTCCCACATCAGTGGGAAGACCCCGACGACGCTGGCTCCCTCGGTCGTTGGG
GACATGGAGGTAGTCAGAGGACCTCGATGATACAAGTGTCTAAATAATATTCAGATTCCT
ATGTGGATTCAGATAATATTCAGATTCCTATGTGGATTCAGATAATATTCAGATTCCTAT
GTGGATTCTGGATTTGATGAAGAGCATTGAAGGAACTAACTTAAGGAACTAAGACTATTC
ATAGTGGGAGTAACATAGATAGTAATATAGATTCCACCTAAATGAAAAACATGATGTGAC
AGCTAATTAATAAGAAGCGAGAGAAATTGGGTAACATAACTAGTTACTCATACTATGAGT
AACATCACACATACCAAGACAAGATGAGTCTATGAGATAATAAATGAAAGGCTCAATGTT
ACCACCTCTATATGTTACTACCTGTTGGGGAACGTCGCATG
