morexGenes - Barley RNA-seq Database

Contig contig_56234
Source Contig contig_56234
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_56234 (10148 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_56234

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_69314	1	346 bp	MLOC_69314.1	Available	Available	LOC_Os02g58560.3, FRAME:+3, EVALUE:2e-67, 13102.m12474 protein 1,3-beta-glucan synthase component, putative, expressed
CDS Structure of MLOC_69314

Contig Sequence (10148 bp)

>contig_56234 10148 assembly3_WGSMorex_rbca.fasta
ACATCAACCGCGTTTCTTGACGCTTACCGTTGAGCGATCTACAAGGGTACGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGGTCTTTGTGCGCGTAGAATTTTTTTTG
TTTCCATGCGATGTTCCCAACAAAATAATCCCTATTTGTTGTGACAGAAACCTTTGTGAT
ACTAGCTGATGTTCTGGGCAACGCACCGTGACATCTTTTGTGGCGGTTTCGTCCCATTTC
AGGTGACGAAGATTCAGTGTCACAAATATGTGCATATTCGATGAATATTTTTTGTATCGT
GGAATATGTTGGACATGCTACTAGAGAAAATATAAATAAAAAAAATGAGTCCGCGAGATT
CAAACCCCTAATCTCAAACAAAAAAGTTAGCTTACTTGAGTTGATAACTTATTAAGACAT
GGTAGATTTATGCTTCTAGATGACTTGAAATAAATAAGTGTTCAACATGGAAGTTGCTCG
CCTCGTTGAAAAGAACAACTTTGCTTTCTATATCATCTCACTCCAAGGTCATATGCAATC
TCCACAAGCGATACAATGTGACAGCCTTTGTCTTGCACTAAATTTCAGACTCAGTTGTCT
GACTTAGGGTGGGTTTGCATATTTTGGACATAAAATAGGAGTAAGTTTTATTGTTGGGGA
AGTCCATCGCCTCATATAGATGAAAGGTGATGATCCATTAAACAATAGATCATACCAATA
TACCAAATTTTACCTTTATTTTTGTTTCTCTCTCTGGGTTCTCTTCTTCTTAGTTCTTCA
TTGTTCTTCGTGTTCAACGACAGGAAACCTCGGGATCTTAGGGGCGGCCTGGCTAACCAC
GAGCAACCCAAAGCCTCACACGTCTTGGCAGGGTCCCTTCTGGGTGCATGGGGTTTCAGA
TCCTCAAGAGACTTTACCGACGTGTCTTGTGTGACGCGTTCGGGTGTGCCTTGTGTATCG
TGCTTGATGTTGGGGGCGACACGGTGACATGTTCATGTGTTGGAAACCTAAAAACCCATA
CCTTGTGTCCCTTGCAAGAATATACATGCAACTTATTCCGAAACTTTTCTACATGAGTTA
AACCACATATTAGATAATTTCAAATTTCAATATTATTATAGTTCTCATATGCATTTTTTT
TAGCTTTTAAATTAATCTTTTGGCATTTCTCATCCAAAAAAATAGAAATAAACCTAAATA
TGGTTGAAAGATGTAACATTCTGCATCACCTCATATATACTAGTACAAGAGATAGGTGAA
AAAGTCTTAGGAGATTTGACAAAGTTTAGTTATACTTTGCTTTGTAATTGGTGGATCTCC
TATGATGTCTCTTAGATATTCAAGTCAACTATGGGGTTTCTAATGAGCAATCAATTTCTT
TGTGCATGTTACTTCAAAAATGGAATATACCATTTACTTTATCATTATTTCTTGACAAAT
TTAGCATCATATTACAACTTTGTTGTAACGTAATTTATTTGTCCTACTTCGCAAATACCT
AATAACTCGTTCCTTGTTAAGCACCATACATAACTATGTATCCAACATATTCCAAATTTT
GTGTACATGAAATAATCACGTATTAGAGATAACTTCGAATTTTAAGAGTTTTCATATCTC
ATTTGCTACTTTTAGATTTTAAATGCATTTGTTACATTTTTTATCCAAATATTAGGAACC
AACCTAAATGTGATAAAAAAAAGTTTTTTTTTGTTGGGGCTCATATTACGGGTTTGCGAG
ATAGGTGAAAATGTCTCATGATATTCTACAAAAGTTTGCTTGTACTTTGCTGCGTAATGG
ATGCATCTTCCAGGATGTTTCTTAGTTATTCAAGTCAAACTATGAGGATTCTAATGACCA
ATCATTTTCTTTGTATAAATAACTTTAAAAGTGGACTCATTTAGTTTATTGTTAGTATTG
AAAAACTTAACTTCATAATTTTCAATTTTCATGTCATAATTTGTTTTTCTTACTTTGCAA
ATACCTAAAAGTTGGTACTTGTGAATCACCATGCAAAAATATTTATCCAACCTACTCTAG
ACTTTTTCTACATAAACTAAAAAACATATTAGAGATAATTTAAAATTTTAAGATTTGTCA
GATCTCATTTTCTATTTTTTCATGTTTTAAATGCATTTTTCCCCATTTTTCATCCAAAAA
ATAGAAACCGACCAACATGTGATAAAAAACACGTAAAATTTAGCAAGGGCTCATATTATG
GGTTTAGGAGATAGGCAAAAATGTACCATGACATTTGACACAATTTTGGTTGTACTTTGC
TTTGTAATGGGTGCATCTCCTAGGATGTTTCTTAGATGGTCAAGTCAAACCATGATGTTT
CTAGTGACCAATCGTTTTCTTTGTACGTGCAACTTCAGAAATGGACTATGCCATATATTT
TATCATTAGTATTGACAAACTTAACTTCATATTGCCACTTGTCGTGCCATAATATTTTTT
CTAAAATGTAAATACGTAAAACTCGGTGCTTTGTGAGGCACCATGCAAAAAATATATCCA
ATATACTCCAATCTTTTTCTACATCAACTAGAAACCATATAAACACACAGGCATTCGATC
TCCCTTAACCCAACATGCAACGAGTCAATGGATCGACACAACAGAAGCAAAACAAGGTCT
CCTCACGCTATGAGGGCGAAATAATCTTGTCACAGCAAGCATATGCTGAAGGGGGGCACT
CTTGCGAGAGTCACATTTCAGGCTCTGGTTAGCCCCTTCCCACACTACATGGGGTTTAGG
GAATGTGCTGGATAATAGTTAGACTAACAATTAAGTCCGATACCTGGTAGTTCTCACTGC
TCAAGTTGTGCTGACAGTGCGACTTGCTCTAATTGACCTGGACATACCACATACAGGGGA
TATCTTCTTAGCTGTCAGGTGACTGAACGATGCTGCTGATCATCCTTACAACAACGTTGG
GCTTGTCGACAGGCACCTGTATAGAAGATTTGTGTTGACGCAAGCTTACGCTTCAGTTTG
GCATATGATGTACCACATTTCAAATAGTGAAATGTTGTATACGTTGGCACGTACCTTGTG
TCCAGCTCCGAGGATCCAGTAGAAGTTCAGGTTCTGGTATGATCTAGCGTATGCCTTCAC
GGGGGTGAGGCAGTCCGCTGGAGAATCACAGTATCGCAAAGCCTGCCTTGGCATGCTCAA
GAAACTCTTCAGACCAGCCCATCTGAAAAACATGATCATGTTAAAAGGTTAGAAAACAAG
CAATAATGATGAATTCAATACACCCAGGAAACAAGAAAGCATACATCTATATGCGAGTAT
CTCGATGCTACAGTGTGCACTACGATTTTGAATTAAGATCTTACGTACATGCATTATGGT
ACTAATCGACCCGTCTTTGTGTTGTTAGTGTCCATCATTCACTACTAAGCGTGACTCGTG
GATGACGCTGTTATGTGGAAGCGCTTCTTATGCACAAGGAATGAATGGGCTGGTTTGTGT
CCTCCTTCCCACAAACGTACCTCGGCCTCCCTCTCTCTGCCTACACACTCCCTCTTTCTT
TAACAGCTTCAAATATCTGAGGGGGTGGAGGGGTAAGCTGCTCTTCGCACCGACAGGCTA
ACTCTCACCTCCTTCGTTCTCGACTCCCTCGCCACATACTTCATGTCAGTTTTCCAAATC
CACAAAAAAGTTTTCAAGGCGCTCGACTGTCAGTTTTCTTCTGGACTGCAGAGGAGACCT
GTACGGGGGCGAAATGTCTTATAGCGTAGCGGGATGTTTGCAAACCAAAAAAATTACGGT
TGTCTAGGCATCAAATATCTTCAAACCCAAAATAGTTCCTTGCTTATGAAATTTGTTTTG
CAATGTTTAGTCTCCCCCCCCCCCCTTCCTTGGGTTACCAGCTGGTACCTACGCTTACAT
AATAACAGCCTTACCCACTACACCCAGCCCTCCTTCCTCTCCAAGATAATTCAAACACAC
CTCCCCACGCTACTCAAACTCTGTTATAACAATGGGGTATCCACCTTCTTCCGGCTTGAT
ACTTGGCTATACCATATACCCTTAGCATCCGCCTTCCCAGGCCTATACTCCCACTCTACT
AATACCAATATCCCCGTGTCGAAAGTTTTGCAGAATGGATTACATTCCAATCTCCAGAAC
CGGCTTACCACTGGGTTCTAATCTAGTTTGGACATACTGCCTCTGTTCTCATGACATCAC
ATTAAATATTTTGCACTGTTACTTTGTCTGTTTTGATCAATGCAATACATTGAAAAGGAA
TGTTTATTTGTCAGTTATATCCATCACTTCAGGTTGCTTATATTGACGAAGTCGAGGAGA
CAAGCAAAAAGGGGGGGACAAGCAAAGATAGGAACAAAAGATAGAGAAGGTTTACTACTC
AGCGTTGGTGAAAGCGGCAGTAACTAAGCCTGATGATCCCGGTCAGAAACTCGATCAGAT
ACTGTGAAATGATTTTAATTCAGTCTTGATTATATCTGATATAATCTAATTGTATAAATA
TGTTTTAGCCATTAGTTGCCTGCAAAACCTGTTCGTCTTTAGTGGATAATCTGCCGATAT
GTGATGTTATTGCATCCAAACAAAGTTACTTCTTCTACTTTTGGGTCCTGGAGCTGAATT
TCATAGCAGATGTCGCATGGGCTATATAACTACCTATATATGTTAGGCAGCTGGAGAAGC
ATTAATGGGATTAATCATGGGGCAATGTTGTGAAAAAAATAATGGGGTATGCAGAAGAAA
TGATCCACAGAAATTGAACTTTATGATTTAATTTGTATTTTATTTGATCATTATTCTTCA
AGCATGCATAGAGGCACAATATTTGGAGCAGGTGCATTTCGTGATCTCACCAGTGCCGAT
TTGATATAAAATTGCTTACCTTGTGACATTTTGTTGTTGTAATAGGACATTTACAGGATA
AAATTTCCAGGCAATGCAATGTTGGGTGAAGGCAAACCAGAAAATCAGAACCATACGATA
ACTTTTACTCGAGGTGACGGCCTACAAACCATAGACATGAATTAGGTATCGTCATCTGTG
CTTCTTCTTGTGCTGCTAGCTAGGATTTTTGGGCCATTTAGTTATGTCATGATGCCATGA
CAGGAGCATTATATGGAGGAGAAATTGAAAATGAGAAACCTGCTGCAAGAGTTCACGAAG
AAACATGATGGTGTGAGGTATCCCACAATACTTGGTATAAGAGAACATATATTCACTGGC
AGGTATATATCGTTTCTGACTGCCTCTTCACCCTTAAATTTGTGATTAATGTGTGACTTT
GTTGTACAGTGTTTTGATTTACTTGGATAAATTACTTTATCAATTACAACTGCTTTTGCA
GTGTTTCTTCGCTTGCGTGGTTCATGTCAAACCAAGAGACAAGTTTTGTGACTATTGGAC
AGCATGTACTTGCCAATCCTTCAAGGTAAACCATCTTGATTGAATCACAATGTAGCTCAT
CTCATTTGTGGGCTTACTACGTTCGGTTACTCACTTTCTTTATGTTTCTTTCTACAACTT
GTCTTTAATTCTGCAAGTAACAAGTTATTGTTTATTATTTCAATTTACTACTCCTTTTTT
GTTCATTTGGTTGAGTTGTCGTCTTGGTTTTGTTTCTTTCTGTTAATGTTAGTCTGTGCA
GTGTTACTCCTCTTTTTCCGATTTTTTTTTAAAGAATGCCCTTCATGTTTTCTTTTCCTG
GACACTCTCGTGTGCAGGGTTCGATTTCATTATGGACATCCTGATATATTTGATCGACTC
TTCCATCTCACAAGGCTCCTTTGGCGGAGTTGTGTGATCTGTCTTTGTCGTTGCAGGATT
TCCATCTCTCAGAGGTCTCGGAGACCCCGGGCGAGAGGTCCTTAGTTCATAGCTTGCCGT
TCTCTGCCAAGGGTGCTTATGAGCTGCTCATGGCTGAAGATGTGGAGTGTGACTGCTATT
TCGGGACCGTCTCAAGATGAAGGCCAATCTGTTCCACAAACACATCGCCAGCTCTGCCTC
ATGTCTGAGGTGCTCCTGTGTATCTGAAGCCACAAACCATCTGTTCCTCCACTGCCCGAA
GGCCGCCCTGGTTTGGAACACTCTCAGCATTTGCCCCTCCAAGGTACCAAGATCTTTGAT
CCGTGGCTACCCCTGTGACTCCTGTCAGCAAAGTGTGGCCTGAGGTTGTCTTGTCCATCC
TTTGTTAGATATGGGACTCCCGGAATTGCTATCGTGGTTCTCCATGAGGATCACACAGCC
GCAACTACTATTTCTAATATTTGGGAAGATTTTGAATTTTGGACTGTGAGAGTTAAGGAC
CCGCTCAACAAGGTGCCCGCTATGTCTTGGCACGACTACCTCTCTGCACAGCTTGTTGTG
CCCCTGTAACTCTTCCTTGAAGCCCATGGTATGTATGCTACATTGGCAATGGTGGAATGA
AAACATCAAAAGAACATCAGGGAGGAAGGTAAACATAGGAGTCTTACTTGAGCTTTTTGA
CCCAAGCTTCCACACCGATTGTCGGGCATATCACATCGAGTTGCCCATTGTAGACCGACA
CATTTACTCCATATGCTAGCAATTGATCAACCTAACCAAGTAAACATGCATAACATCTCA
AACACCACAAATTTTCATCAGCCAACAAATTAGATCCATCAGAGCTTTGTTTACCTCGTC
GATTGCTGGCTTCATGTAGGTGGCGTTCATTGCATGGAAAACTTGAATAGACACTCCTTG
CCAACTGCAGTTTAATCAGATATCAGATTACTGTAATTTGAGCAAAATGATATTTTGGGC
GGAAAAGGAAAAACATATAGAAGAAAAGTATGCTCACATTATGTTCTGAGGAATAACCTT
CAACTTTTCTTTAATGAGCCCATTCATGAGACCATCAATGGTGTTGGGGGTTGATGGAAA
CACCTGGCTCATCGATGAGCCTTCGCCTTTGTCAAGCAAGAAATTTAGCATATCCTGCAG
AAAGTCATGCATGTTTTATCAATTTTTGCTAAATGTATTAATATTTTGTTGAGAGAACAA
TCTAATAAATGTCAACCAAACATGCCATCAACATGCTATCCGTAGTTTGGTCTACTGGTC
CAGATGATCTCCCTCTGTTTTACCAGATATGAAATGAGCTCAGGTCAAAAGGTCAACTTG
CAGAAGTCCTCTATTTTTTTTTTTTTGGCCTGGGGGTGCAAGAAAACTCCAACGAGGATC
TGAAAGTTGTTATCAGTATTGATAGAAGCAGTGAATGAAGGATATCTGGGCCTCCCAACA
ATGGTGGGTAGGTCCAAGGATGGTGCTTTCAAGTGAGGCATATTGCTGAAAGAGATTGGG
GGAACATGCAAGGGTGGAAGGGTCAGACGCTATCAAAGGCAGGAAAGGAGATCCTAGTAA
AATCTGTTAAACAAGCTGTTCTCGCCTACACCATGAGCTGTGTTTCTTTTACTAAGTTCC
TCGAGCAGCTTACTTCTGTATTTATGTTATGAAAAAATTCTGGTGGGACTTATGCAATTT
ACAGCGCAAGGTGCATTTGGCCAGCTAGGAGAAGTTCTTGGTTCCAAAGAAATGGGGAGG
TGTAGGCTTCAGGGATATGGAGGCTTTCAACCAAACATTTTTGGCTCGGCGAGGTTGGCG
GATCCTAAGTTGTCCTGAGTCACTCTGGGCAAGTTTTAAGAGCCTGCTATTTTAGGCAAA
CTGATTTTCTGAATGCGTATAGTTCCCCTCGTAGTGATTCCTTGACATGGCGCAGTATTT
TACATGGAAGGAAGTTGCTCAAACAGGAATCATCTGAAGAATTGTCAGTGGAGAAAAAGT
CGATATCTAGCAAGACGATTGGTTACCTCGGAGTAGTTGCACGCACCCTTCGGGAAGGTG
AAAACAAACATTTGCAAAATGTCTGATCTTCTATTGGCGGGCAATAAACGGTGGAATGAG
AACATTATGTACTGTTTGGCATGCTTTGTAGCCAATATGTACTGTTTGGTTGCAACTGTT
TGGCATGCCAATGGCTCCTTATCAACTCTACTTCATTTTTAAGTCAAAGTTGGCCAACTC
ATAGGCACACAAAACCTTGACCAATATCTTGGCTAGCAAAATATTTGATGGGGCAACTCT
AGACTCAAACCAAACAAACCCTATGTTACTAATTACTACTCCCTCCGTTCCTAAATATAA
GTCTTTTACATATTTCATTAGAGGACTACATACGGAGCAAAATGAATGAATCTACAATCT
AATGTATGTCTATATACATCCATATGTTGTTTTTTAGTAAAAACACTTAAAAGACTTATA
TTTAGGAACGGAGGAAGTATTACTTACCACGCCATCACTCTGCTGGTCAATCAATTTAAC
TAGATTCGTCCACGTCATCTTCGCCATGGTGAATTGTCCCGCTGCCATCTGCTCTTTTAC
TATTGCCGCCATTCTACAAACGAAATATCAAATAAGGGCATGCAATTGGAGATCGAGGCA
AATAACATGTTGCAGATTTTTACCTGTTGAGAGGGGCAACAGCTTCGTCGCCCAGCCTCG
ACGCATCGCGCAACAGTTGCGCATATGAGAACTGAAAGGATCCAAACCATTGGTTGGGAA
AATCGAGCCTTTTTGCATGGAAAATGGAACTGCTTTGATCATTGAGGAGAGACTCAAACA
TATTAAATGATTTACTTACCGCAAAATCACCTGGTGAGATCCAGCTATCCCTAAGCACGA
CACCGCCTAGTGTCAGCTCGAGGGTGCCGGCATGGATTGCCTTTGCCACGGAGATACCGA
TCTTAGCTGCAAGCTTGCCACCATAAGACTCGCCGACAAGGAACAACGGACTGCTGTGCA
AGGTGGGTATCTCCTTGGTGAGTGCCTTGAGGAGCTCGGTGGCGTCAGCAGCCACTTGCA
CGTCCGTCGTTGCTAGCACACTGGGGTCCTCTGCGTAGCTATACCCCACGCCCACCGGTA
AGTCCTGCATTCCGACATACTCGTTACTTACAATGGAAATATCCTTATAGTACGTGCATG
AAGGAACAACTCTCTTACCACGAAGATGAGATCAGCCTTCTGCAGCCACGTTGAGTTGCG
TGGCTTCAGATTGACATCCAGCGGCCCGATCCCCTGGAAGTTGCCACCTCCGACGCCCGA
CCCTCCCTTGAAGAACAGAACGATGGTCAACTAATGCTTTGTACTCAACCAAAGAAAAAG
AAAAATGGCAGTGAGAGGAGACCAGTTTACATACCGGACCGCCCTCCAACCAGAGGATGG
TTGGCCATGGCTTTATTGGCGAAGACACGCGATGTGGGCTCTTGTAATACCACCAAAATA
GATGTGCCTCTGCAACAAAACTTATGGTTAAACTCATGCACAAAAACAGATAAATGAAAC
AAAATTTAGTCTTAGTAGTAAATGGCAAAACGGAAGGATGAGAGGACCCAACATGATATG
AAGATTGCTATTATAGTGCATACTTACTGTGACGAACTTCAACGTAGCCCCATATCTCAC
TTTTATCAGCAGCAACGGCAACACCTTGAAGAATGAAGCATAGGAGGAGAACAAAGGCTC
GCCACATCTGAACCAATGTAGATAACTGAATTTAGGTCTATGTATTCCTGGATGTAAGCA
AGCAGTCTCTTTTTAACCATGAATATCTACCAAACATGTAAGAAGCTCGCCACATATGAA
CCAATGTACATCTAGATTTAAGTCTATGTGTTACTAAATGTAAGCAAGCAGCATCCTTTT
AGTCCACACGTCGATCAAGACACATGAACCATGAATATCTAGTACCAAACATGTAAGAAG
CTCGTAAAAGTGAGCAATGAGGCCAGGAAGCTAAGTTTGGTTCTTTATGTTTGAGTCTGA
GGTAAGACCTTAATGAAAGGCAGATGTTCTCTATGAAAAGGAAAAAAAACGCAGTATCAG
AATCACATAGTTCCACGTATCTCAATACAAGAAATTCGTGCACATAGCACAATTCAACCT
TGGGTCAGCCACGAGTACTAAGTAGTACTGTACCTTGTTCGCCGTCGGGGCGGACTGCTG
GCTGGAGGTCAGGGCTCGGCGCGAGGGGCTGGACGACGGCGGGAAGAGGAGATCGTGGCA
GTGCACGTCGGCGCAAGGACGCGAGGAGGTCGGGGCGGCCGGACGAGGAGGCCGGGCCTG
GCGGCGCG