Contig Data
morexGenes
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Map Locations of contig_56227 (6423 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_56227

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69312 3 1850 bp MLOC_69312.2 Available Available LOC_Os03g50290.3, FRAME:+3, EVALUE:1e-172, 13103.m05469 protein 14-3-3 protein, putative, expressed





CDS Structure of MLOC_69312






Contig Sequence (6423 bp)

>contig_56227 6423 assembly3_WGSMorex_rbca.fasta
CCGTGCGTGCTGTTTTGGAGCTGTAGTGTTTAGCGAGCAAAGGCCCGCTGTCCCGTCTCG
TTCCCGCCATCCCGCCGAACCCGCTCTCCCGTTCTCTTACATTATCCACAGCCAGCGCCC
ACTCGCCCGAGATCCGCTGCCGAGGCCCGTGAGAACTCCGCCGCGCCAGAGGAAAAGGTA
CTCCCCTCCCCCTCCCTTTCCCCTCTGCTCTCGGTGCGAGCCACCGGTTGATTGTTGTGC
GGGGATCAGAGGTGAGGCGACCCCGCGCGTACCGCGGCCGGATCCATTTCCGTTTCCGTT
TTTCTGCTTTTGATTTGTTCGCGTCGGGCTAGATCCTGGCCTGGATCGGGCTGGATCTGG
CGCTGGCTTGCTGGATCGGTTAGGGTTCGAGATCGGATCTGGTGCGGTAGTTAGGTTTTC
CCAGAGCGGTGGTCTTCCTGCCGGAAACGCGGCTTGTTGACCGTCTTTACCCTTTGGTTG
GGCCGGTTTCAGTGGAGATCGACGGGCGAATTTCAGGAGGTTTCGAGATCTGGCCAGGAG
CATGGTAATGCGCACCGTGCCGATGCTCGTGGTGGTGCTGGGTCTCTAGATCCGGCGCGC
ATCTAGGTAGATGTGATGCGAATCTCGTCGGACGAGCTCTAGATCTAGTCATATTATTAA
AAGTAGGACGCAAGTTTTTATGTGTTTGGACCGTTCTAATTTCAACTTGATGTTTGTTTG
CTTGTTATTCCGTGGAATATTGTTTTCTCAACCTGATGTTCGGTGGTGTTAGGCTAGATT
TGTCGATTAGAATATCGGAAAGTCGGAGAATAAAAGCAGAATATTGACAGCTCATTTTGA
GGATGTAGTAGGATATCTAGATGCCTACACTCCATAAAGTGATTCCTTGCCTAGGTTGAT
AAAGTAGGCTAGTTCTCTAACTATGCTGTTTCATATAAAACTGCTCACACCACTTGCGAA
TCAGGGAAAGAGGGTGACTTGCGTAACTGTATATTCTCTTTCCTTTGGTTCATTGTTCTT
CATCAGATTCTTAAACTAGCTAGATTGTTGATCCCACATGCACTGTTCTTCACGGTGTAA
GGGCAGCTTGTAATAGTGACAACTTTGTATTTGCAGGCACTGAACTAGGTTGTAACAAGG
AACAGGGAAGATGTCTACCGCTGAGGCAACCCGTGAGGAGAATGTGTACATGGCCAAGCT
CGCTGAGCAGGCTGAGCGTTACGAGGAAATGGTTGAATTCATGGAGAAGGTGGCAAAGAC
CGCTGATGTCGGTGAGCTCACTGTTGAGGAGCGCAACCTGCTGTCTGTGGCTTACAAGAA
TGTGATTGGTGCCCGGAGGGCATCCTGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGA
GAGCCGTGGGAACGAGGCCTATGTCGCTTCGATCAAGGAGTACCGTACCAGGATTGAAAC
TGAGCTCAGCAAGATATGCGATGGCATCCTCAAGCTTCTGGACTCCCACCTCGTCCCCTC
TGCCACTGCAGCAGAGTCCAAGGTGTTCTATCTGAAAATGAAGGGTGATTACCACAGGTA
TTTACTTGCAGCATACAGAGAATTAGACCAGTCCATAGTTGTTGTACACAAATTTACTTT
ATACTCACTGATTGCGAAACCATAGGTACCTTGCGGAGTTCAAGGCCGGTGCTGAGAGGA
AAGAAGCAGCTGAGAACACTCTTGTTGCGTACAAGTCAGCCCAGGTTAGATTTTATGGAT
CGTTTGCTACTTTGAAACATCCAGTTTCACCTACCAGTTTGCTTTATCATCATTCTCTTG
CAAAATTGAATACATGTTCCATCTTTCCTGTTTGGGACCAAGTTCCTTCAATTTTTCGGA
TATGCTATACTACTGGCTATTCTTTTCTTTGTGTATGTTCTCTTTCATTGGGTGCACATG
CTGACATCTTTTTACTTGTTCAGGACATTGCTCTTGCTGACTTGCCTACTACTCACCCGA
TTAGGCTTGGGCTTGCACTCAACTTCTCAGTGTTCTACTATGAAATCCTGAACTCTCCAG
ACCGTGCTTGCAACCTTGCCAAGCAGGTTAGTCTTCTCTGTTTTGTACTTCATATCTTTT
GATGATGAAAAGTACACCTGAGTGCTATTCCTCATTGAAGCTATACCAGTCTGATCTCTG
GTTATATTGTCACATCAACATTTCTTATGCTTTCCTTTATGGTAGAGCATTGTCAAGTTT
TTGTATGCAAGATGAACATAAATCCTTGCTAACTATGCCAACCACTCAAAATGATTCATG
CCGCTGAGAATTTAATTTGAACCAACACTTGACGTACTGTTATATGTCTAGACTGATATT
AATACTGGTATGTATACTTCTTGGTAGGCATTTGATGAAGCTATTGCTGAGCTGGACTCC
CTCGGCGAGGAATCCTACAAGGACAGCACCTTGATCATGCAACTTCTTCGTGACAACTTG
ACCCTCTGGACCTCCGATAACGCAGTATGCCCCCCTCAAAAACTATTTCCTGTATTTGTT
CATTATGTGGGGTGTTGAAAACCCTGTTGCTCATAATCCTGCTAAACTTTTCCAGGAGGA
GGGTGGTGATGAGATCAAGGAAGCTGCCTCAAAGCCTGAGGGAGAGGGGCACTGATTGGC
CCTCAAGAGTGTGCCCAAGTTTATTTCTGAGTCCATTTACGCAGCTACCTGTATCATTCG
GATCATAAGATGTACTAGGGTCGGTTGCACTATGTGAATCATAAGATGTGGTAGGATGGT
GCTATGCGAAGCGTGTCGAGCTGAAGTACCTAGTGGACTACAGTCATGAGGACGGTCATG
TGGACATCGTCGCTTCTTAGTTCATTAGCAGATTTCAAACTATTTCCTGTATTGCAGCAC
ATTATTAGTATTGCTGTATTAGCAATTTTCATGGCTTGTTGATGATTGATCATACTTCGC
GTAAGGCGCCCCTAAAGCTTGTGCCTTTCTTATGAGGCAACAACTGAGATTTTCTTGTCT
ACTTTCCCTCTCAAAATAATTGAAGTTCTAGGATTCTTCCCTTAGCTTAATTATGAAATG
TATTTTCGTATTATTATATCGATCAACATGTTCAACATCAATTTTATTCCCTTATTTTAA
TTTTGAAATGTATTTCTGTATTTTTATGATGTCCTGTCGTTTTTTCTGATGATATTTAAT
CCCTCTTTATGTTTATATTTGTACTCTAGACAATTAAACTTTGTTCCAATTTAGTGACTT
AAGCCAAGAGCAATATGCACAAAAAACTTTTCATCCTATGTCCCAAGAGCCAAGCCAAGA
GCAATATGCCACATGAGAAGCCAATATCACGGCCCTTCTAATTTCCCAGAAGTCCTCTTC
TTCAACGTCAATTTCATCTCTTTGAATGAAGCATGCTTCCCTCTCTACACCTCTTTGCTT
CGTCATCTACCTTTTCTTGTCTCTTTGACATCTTGACACCTTGCTAATTTCTCCTGTTTC
TTGAACGTGACTATTTGTGTCAGATGGATGGTTCTAGGCCCAAATAGATGCTAACATGGA
TGGTTACGATTGTGTGTACAAATATTGTCCTCCCTTTAATCCAAATTAATTGACACAACT
TAAATCATCTCAAACTTTTCTCTCTAGGCACAAAACTTTAATCCTTCCTAAGTCTCTCCT
CTTGATTCGTCCACTCGAGTCTCCATGAAGTTAGAGTACGGCTTTGTAGATCTCCCATCT
TCCTTCTCTTCTACTCCATCCTTGCTCTCTGAGAAGAGGAGTGATTTGACATCGGTCTTT
TTGGTAAAGCGTCACGATTCCTTGAGTGTAAAAAGATTTCATTCAGACTAATGCATATGC
TTGTATGGTAATTTTCATGTGGCATCGAACAATTCATGATGAGAGATATGTTTTATCTTC
TTATAATAGTATAGAAAACTGGCTAGAATAGGCAAATCTATGAGTTTGGACGAATATCCC
ATAACCGGACCTTGGGGTCCCCCGAACTTTCGGATCGCAGCGGGACATAAAACCAGTGAT
TAATATCATAGAAAACTTACGAGAATAGGCCAAAAATGTGAGTTTTGATGAGCTTCCCGT
ATTCGGAACCCATGGTGCCTCGAACATTCGGATCGCTCGAGGACCAAAAATCAGTGAGTA
ATAGTATTGAATACTTGTCATAACAAGCCAAAGATGCGAGTTTTGACAACCTTCCCGTAA
CCGGGCCCCAAAGTTCCCCGAACACTCGGATCGCAGCGGGTCCCAAATCAGTGAGTAAGA
AATTGGCCAAAATAGGCCAAACCCGCGAGTTTTGACGAGTTCCCCGTAACTGTACCCCGG
GGTTCCCCGATCGTTTGAATCGCGACAAGACTCCAAATCAGTGACTAATAGTATGAAAAA
CTGCCCAGAATAGGCCAAAGTTATGAGTTTTTGACGAGTTCCCCGTAACCGAACCCCGCG
ATTTCCCGGATGTTCGAATCGTGTGGGACACAAAATCAGTGAGTAATAGTATAGGAACTC
GCCACAATAGGCCAAATATGCGAGTTTTGATGAGTTCCCCGTAACCAGACCACTGGGTTC
CACGGACGTCCGGGTCGCCGACACTCAAAATCAGTGAGTAATAGTATAGGAAACTAGCCA
CAATAGGTCAAATCTATGAGTTTTGATGCGGTCCCCGTAAGCGGAGGCGGAGTTCCCCGA
ACGTTCGGATCGCACTCGGACCTAAACTCAGTGAGTAATAGTATAGAAAACTAGCCAGAA
TAGGTGAAATCTATAAGTTTTGATGAGTTCCCCGTAACCGGACCCCGGGGTTCCACGCAC
TTTCGGGTCGCCCCGGGACTCAAAATGAGTGAGTAATAGTATAGAAAATTAGCCACAACA
GGCCAAATCTATGAGTTTTGGCGAGGTCCCCATAAGCGGAGCGCGGAGTTCCCCGGACGT
TCGAGTCGTAGTGGGACCCAAAATCAATGAGTAATAGTATTGAAAACTAGCGAGAATAGG
TCAAATCTACGAGTTTTGACGAGTTCCCCGTCACCGGACCCGAGGGTTCCACAAACGTTA
GGGTTATCCGAGGACTCAAAATTAGTGAGTAATAGTATAGAAAACCGGCCAGAATAGAGC
AAAACTATGAGTTTTGGTGAGTTCCTCGTAACCGGATCGCGGGGTTCCCGGAACGTTCGG
ATCGTCCCGTGACCCAAAATCAATGAGTAATAGTACATAAAACTAGCCACAATATGCCAA
ATCTATGAGTTTCGCCGAGGTACCCGTAAAGGGACCCCGAAGTTCTATGGACGTTGAGAT
CGTAGCGGGACCCAAAATCACTGAGTAATAGTATACAAAATAGGCTAGAATAGGCCAAAT
CTCCGAGTTTTGACGACTTCCCCATAACCGTATCCAAGGGTTTCCCAGACGTTCGAAATG
CAGAGGGACCCAAAATTAGAGAGTAATAGGAAAGAAAACTAGCCAAAATTGCCAAATTTG
TTAGTTTTGAGGAGTTCCCGTTACCGGACCCACGGGTTCTCGAGAGGTTCGTATGATAGC
GGGACCTAAAATAAGTGAGTAATATTATAGAAAACCGGCTAGAATAGGCCAAATTTGTGA
GTTTGGACAAGTACCCCATAATCGGACACTGGGGTCCCCAAACTTTTGGGTCGTAGCGGG
ATAGAAAATTAGTGAGTAGTGGCATAGAAAACTAGCGAGAATAGGCCAAACTGCGAGTTT
TGATGAGTTCCCCATAATCGGAACCCATGGTTCCCCGAACGTTCAGATCGCACGAGGACC
CAAAATCAATGAGTAATAGTATTGTATACTAGAGAGAAGAGGCCAAAGCTGTGAGTTTTG
CCGAGTTCCCCAAAACCGGGCCCCAAACTTCCCCGAACGCACGGATTGCAGTGGGATCCA
AAACTAGTGACTAAGAAAACTCGCCAAAATAGGCCAAATCCGCGAGTTTTGACGAGTTCC
CCGTAACCATACCCCGGGGTTCCCCGATCGTTTGAATAGCGATGAGACCCAAACTCAGTG
ACTAATAGTTTAGAAAACTACCCAGAATAGGCGAAAGTTGTGAGTTTTGATGAGTTTCCC
GTAACTGAACCACGGGGTTCCCTCGACGTTCGGATCACGCGGGACCCAAAATCAATGACT
AATAGTATAGAAAGCTAGTGAGAATAGGCCAAATCTGCGAGTTTTGGCGAATTCCTCGTA
ACCACACCCCGGGGTTCCACAGACGTTCCTGTCGCCCCGGGACTCAAAATCAGTTTGTAA
TTGTATAGAAAACTAGCCAGAATAGGCCAAATCTATGAGTTTTGGCGAGGATGCCGTAAG
CGGACCCAGAGTTCCTCGAAACCGGACCCCGAGGTTCCACGAATGTCCGGGTTGCCCCGG
GACTCAAAACTAGTGAGTAGTAGTATAGAAAACTGGCCAAAATATGTTGGGGAACGTCGC
ATG