| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_5620
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_69286 |
3 |
6462 bp |
MLOC_69286.2 |
Available |
Available |
LOC_Os02g54200.2, FRAME:-1, EVALUE:0.0, 13102.m06207 protein mitochondrial transcription termination factor family protein, putative, expressed |
CDS Structure of MLOC_69286
Contig Sequence (6513 bp)
>contig_5620 6513 assembly3_WGSMorex_rbca.fasta
TTTAGGAACGGAGGGAGTAGCTGCTAAGCAGGGGCTCCTCCCATGCATTCTCAGTTCTAG
GCGAGGCCTCTTACTAGGCCGATACGTGCAGGCTTAATTTTCCTTGTTTTTTTGATTTTT
TTACTGCTACAAAGGATTTACCGCTGAATGCCCAAGCACTGGAAATATCTGGACGCGAGG
CCCGTATCCACAGCTCAGCCTCCTTCCTTCTTCACGCAGATAGGGAGAGGGGGCTAACGA
GAGAGAGAGAGAGGAGGGAGAGCAAAAGGGACCGTGTCGCCGATCCCTCGCCACCGCGCC
ACGTCCACCCGCAGATCCCTCGCCGTCCCGCCACCGTCTGTCGCCGCCGTCCTCCGCGGG
CCGTCATCGACGCACCTCCCATGGCCACAGTTTGATCCGGTCGCTGGTCGCTCCATCCTC
ACCACGGCCTTTCCTCTCCTCTCCATCCCCATCTTGCCCTATCCTCTATCACCCCTTTCA
TCCTCCTCTTAGATAGGGTAGATCGTCTTGATCTCCTCTACGGTCGTCGAAGCAACTCCC
GGACAAACCCTAGCCACCACTGTCTCCAACGTGACGGCGGATGCCGGCGAACAACATTGA
AGGTCGTGGAACGAGGCGACGCTGCTGTTGGTGCTGAACCGAGGTTGACGACGCACAACA
CACGACCGCGGTGCAGGTTGAGCCAACACCCATCTCACAATGCGCCTCTTCTCTTCAATT
TTCACTAAATTCGATAAATGCATGGCTAAATATATTATTATTGTGTATTGACAACGTCTA
GGATTTTGCAATTAATCATGTTGTAGTTGAATAAAATAGTTTTTATCAGAACTGACAATG
TTATATGGACTTGCATCTTCTTATTCTTTAAGACTAGATCCATTGAAAAGTGAAGAAAGA
AAGACACAAGAGATGTGAAGCATCTGCATCCCTTATGAGTATGCAATACGGTGAACAATG
ATTAATTGCTCAGTATTGGAGCTATCCTGCTAATTGTTTGAGGTTTGGAAGGAAACGTGC
TGCAGCTAGAAATATTGGTTTCACATAAAATTTGTTGGCCGACAGCATTGCAGCTTGCCA
TTGATTAGTACACAGCCACGCTATCTATTTACTGCTCTTAATGATTTTACCCTGAAAAAG
AAAAGCCTCATATATAATGTTGATATTGTATTTGTAGTTCATTCCCTATTTATATTGTTT
GGCAAACATACATGTCAATTGTTAAGGATTACTCGATCATGTTCCTGCAATATGGGTAGA
AGAGACATATTCCTGGTGGATATTGCATCTTGGTTCTATTTTGTAGATCTGAATTAAATG
TACAGTCATATTGTTTTGACCATAAAAAGTCATATTTTATTCTCTTCTACTGGTTTACAC
TTTCTTTGTATTATGTATGGCCAGTTTACATTCATTGTGATGATTTACACAGTCTTTTCA
TGCATTTTTTATCTTTTCAACAAGGGGATGTGAGGAGCTTTATGATTAGAAAATACTCAT
AGAGACCATTGGTACTTATCTGAATTAATTTGATTGAAGCAAATCAACCCAGTTGTTCCT
CTTTTTTTTATAATAATAAATGTAGGCAATTGTTTTCCAATATGCTAACTGTGAGGGCTC
TCTACACTCCAGTTAAAATGCTGCACATGGTTCTTATAGATCTCTTCCAGTTAGATCTGT
TTGGTTGTGTGTTGTTTCTGTTTCTATCACATTCCTTTCCCTGGAGGTTCTTTTCTATAA
TGAATCGTTTCTGGTTACAATAGCATATATATCATGTCTTTGGTTGTATAGCACTAGCAA
ACTTGAAAGAGGCAATTGGTTTCATATGTTTATCCACTAAACACATAAGTATTACATGGG
TTGGCCTCTTTCCCTCTGTCAGAAAGAACTCTACTTATTTCACCTGTTATGCATCTTATA
CTTTTAATTATGTGATAACTGACAACTTATTACTTTATGTGTGCTTTGACGACCAGTACT
GCAGTGCTCTCGAGTTATTCAACAAAATTTCAAAGGTAAGCTCCTTATCACGCTTCTTGC
TTTAATTTCTCCAGTTATCTGTCAGTTATGTTGATAAGGATTTCTTAATTCGAGTCTGAA
TCCAATTTTTCCATTGCAAGATTAAGCCACATTTCTTGCTTAATGTTGTCCACTATATAT
TCAGGAAAATAAGGATCTATGTATGTATTACTTGGTAGTGGTTTGCTCTACTTATCTAGG
TTTTCTTGTGCTACCTGCAGTTTTTATTTTGTGTGACAATGATTAACTTCGGCCCATAAC
TAAATTATCTCTGTTTAATTATGCTCATAGGTCACAGTTTCATTCCAATCAACATTCATT
CTTTAGCACCTTCAGACCAACAGGACAAGAAGATTGATCTGAAACAAGATAGCACGGTTG
GAGACTTACAAGGATGCCTACATTGCTCTCTGCTTTCACTGTTAGAAAAATTGTGCGAAA
CATGTAGTAGCAAGCGACTAATAGAAGAACATGTTGTAGCAAGCTAAAAATACTACTGAA
GAGGTAGTAGTAACCTAAGAAAAAAAAAACTTAAAAACAAGTCGTAGCAACCACCACAGT
ACATACCAAGCAGTAGCAAGCACTACAGTACAAAACTGCAGAAAAAATATTATTGAACAT
GGCTTTATCCCCGGGAGAGGGAAGTAAAATGAGAAACCATCTAAATGATAAAAAATACTA
CTGAACATGGCTTTCTCCCTGGGAGAGGGAAGTAAAAAGAGAAATCATCTAAATGATCAG
AGACTTCGGTGAGGGTGCAGGACTGACGTCATTATTATTAGTTCAGCCACATGCCTAAGC
ACTCTAGCCTGGGTCTGTATGTGCCAATCATGAGGAGCCTCATATAGCTATAATTTTACT
GTGAGGTTGGCAATTGCATATTCAGTATCAATCGAGTATATTTAAGCACTTACAATAATG
GAAGATTAGTTACTGAATACTAGCATGTTAGGTTTATACTAGCAAGCCCCTAGCTTTGTT
TGTTTGTTCTTCGTAGGTGAGACCCCTGATTTTGCTTATCGTTGTCAAGATATTTGCCAA
GGGAAGTGCGTGTCATGGCTTTCCAAGGTTTTCCTCACCTTTGTTTTTGCTAGAAAATTT
GAGGTGAAACTAAAATGTCTGTTTCTATCCTTCCCATGCTTTAGAGCATTTTGTATGCTT
GACATATCAATCAGACTTTGAATGAGACCCATATTTGTGTGTGTTGCTGGCCAACTATAG
AAACTGAAACTAGGGACATAATTCACTTAATAAGTAACAACTTCCGGTCGAAGTTTAACA
GTCTCAGCTACGTCATTCCAGATTGATGTTAAAGTTCTGAAGTGTATGACCCTTTGTCTA
TTATTCATGTCCCCTTTACCTCCGAGACCTATATTCATGACGTATGTTGTCTCCAATAGA
TGGCATCAGTCCCAACCAGAGTAAACTAGGTATGCATGGTGTTATGACATAACAAGCAGA
ACAGAGAGAGCTTACATGCTAATGTTCAGAAATTATATGCAGCAGCAGCTTTGCTATAAG
AACATAAGCCAATAATGAAAAAATGAAGTCTGAAGAAATCCTTATCATTTAGAACAAATT
ACTACAACACATAGCCTGTGGGCATAATATGTCAGTACAGTTCGTTGGTAAATGATTTCT
CCATGGCAATTGGGGTTACCTTAGCATTTCATGATATTTTTATTAGGTGTTCTTATGGTT
CCTGCTAATTGTCCAATTCTTTCTCTTTGCATTCTCAAATGACAAAGTGCATATTTTTTT
GCAGCTTGATGATCATCCTTGTCAGACAAGTTGGCTTCTCATAAGATTACCATTAATCTT
TTGTCTCTATAAATCAAAAGAATGCAACGTATTCGGAGTCCAAAAGAGGCATTGAGCAGT
TACAGTTGTAACCGCAAGATCGTGCCTGCTGGAAGTCCTATTTCAATTTTTGGTTATCCA
GTAGCTTGCTCACTAAGCTCTGGCTATTTGAGCTGGCATTTCCATAATATGCATAATTAG
ATAAGAATATTAATGGTTGTCCTTGTGATTCCCATGAGGGGCTATTCTTGAAAAGACTGA
GTTCAACACAGTCAAGTGTACTTCTCAGTTGGAATAGAAAATTCATGAATCCTGGTTATT
CTTTACGTAGAAATAATCCATTTGCTTCCAATGATATTCCACATTAACTTATATGCAAAG
AGATATAGAAAGAACGTGTAAGAAATTGTTGCTAAATGCTCGTCCCATATACTTATGCGT
ATTTTAGAAAAGGTAAACAATAACGGCGATGGGTTTGAGTAGCTTCAGTTAATACTCTTA
AATTTTGTTGGATGTACCATGCATAATTTTAAATTACTTCCCTTTTCAGTTGGATGTGCT
TTTTTTTCATGTAAGAAATTTGAATATCGCCTGCAACCAGCTCAACCTCTGTATCACTAC
CACCTCTTCTCTTACTCTAATATTTAAAACAATACATATGTATGCACATGCTCAACCACG
GCGCGGCGGCTTCTGCCTGCTAGCATTAGTATATTACGGATATAGTTTACGGGCTGAGGT
GGGGGCATGAGGTTAAATTCAGGGTTTGGTTTTCTAGGAGCTACATTTTGAGGGACCATG
GAAAACAGGGCACGTCAATTTGTATGCAAGGTCTGTAACAAATCCTTCCGTAAGTCTAGG
ATTATTGTACCAAAAACTACTTACTGTTACCTACACATTTCTGACCACAGTTCAATAAAT
AGTAACACTTCAGTTATTACTTCCTCCCTGCAACAGTGCTTCTCTGCTTCTAGCTTAGCA
CAATAGCATGAAACTGCTTAAGAATTTTGTGTGGCTGTTTATGCTTGGAAAATTAGACAA
GTTGAATGTTCTACATCACTGATTTGAAATCCTGGTATCAGCAAATATATCATTTCTCGC
TCCTTTGAAAAATACCAGGGCGAGAAAAGATACCGCCCGTCATGTAAAATACTTGCAAAC
TAGAACTCACTTGCTTATATGATGATGTCCGAAACGCATGTGGAAGACCTTATGGATTAG
CTTCCACCAAATCTGACACAAAGGTAACAATGTTCTGTAATTGTCAATACTTAATAGACT
GATGGAATGATACAACACGTAAGCAAGAACAAGAAGCAGTACTCACTAGAGCATAACCGT
CCGCCTATATAGGACCTCATCGTCACTATCCTCATTATCATCATCAGACACTATCTGGTT
ACCAGGCATCTGAAGCTTCCCACCCATTGTAAACGAAGGTCCTGGTGCATCCCCTTCAAT
GAAATCCCCTCGCATCCTTTCCTCAAACCTCTGGTCGCTGCAGTTCAGAAACCAATCCAA
GCTACATCTAATCCCCTTGCTTGCCACTCTCATGTACCTAGGCTTGATCCTTGACTCCAA
GCTGTATGTAAAATACTCTGGGTACTCCAGAAGTTCACTTATTGGCCGCTTCAGCTCGCT
CTTGAAGAAGTAAAAACTGTTCTTCATGAGCTCATTCCGCAGCAAAAGAATCTGTGGGCA
CCGGATCAACATGCGCCCAATATCATCATCGGTGATTCCCCGTCCGCGAAGGAACTCCAC
AGGCTTAAGTATCACATTCTGATGCAAGCTCACAAGCTGTGGCAACTTCTCAACAGCGCG
AGCGAACCCATCAGGGTCAATTTTGAGCTTCAAGTTGAAGAAGTACTGCTGTGCCGCTAG
CTTCACCTTCAGAGGCAACCCAAGGATGGATGGGTACTGCGCAATCATGAGTGGCAGCAC
CTCCTTCCGAATGCCGAAGCTGAGTAATGCCTCGACATTTGGTTTGACCGTCTCCTCAAG
ATCATATCCAAGAATGTATGGCCGCTTCTCAATAATCCTCGCGAGAATCCTCATCGGCAG
CCCCAGAGATGTGATGTAATCGCAGAAGGGCTTGATCGTGGTGCCAACACGCATGCTAAG
GAAGAAGGGATAGTGCGTCACCATGGGGCCAATGTCACGCGGCGCGACGCCGAGGATGCC
GACGAGGTAGGCGACGGAGGTGCTGATGGTGCCGTCGGGCTTGAGGCCGAGGACGTCGGG
GTAGCGCTCGAGGACGCGGGGGATGTCCTGGCGGTCGACGTCGAGGCCGCGGAGCGCCTT
GACGATGGGGGCGAGGTCGACGGCGACGGAGGCGTGGAGGCAGGCCGGGTAGGCGCGGAC
GAAGGCGGCGAGGCGGGCGCGCGTGACCCCGAGCTTCTCGAGGTAGGAGAGGACGGGGAT
GACGTTCTTGCGGAGGGAGCAGGCGAGGAGGAACGGGTAGGCGGAGAGGTCGTCGGTGGA
GAGGCCGAGGCGGAGGAGGAAGTCGAGGCGCTCCTGCAGCACGTCGAGGGAGGAGGGGAG
CTCGACGGCCTCGAGCTCGCCCGCGGGGTCGGTGACGCCGGCCGAGCGGAGGAAGTCGAG
GGCGAGCACGCGGGACACGAGCCGCGCCCTGCGGCCCTGGATCACGCCCCCCCTCACCGA
CGGCATCTGGTACTCCCGCTGCGTGGACGGCGA
