Map Locations of contig_56145 (9989 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_56145

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69244 4 2567 bp AK249837.1 Available Available None
MLOC_69242 4 5797 bp AK366243 Available Available None
MLOC_69243 1 294 bp None Available Available None





CDS Structure of MLOC_69244






CDS Structure of MLOC_69242






CDS Structure of MLOC_69243






Contig Sequence (9989 bp)

>contig_56145 9989 assembly3_WGSMorex_rbca.fasta
CCGACCACGATAAGCAGTATATATAAGAGGACCAAGGTCGGTTCCGTGTCGCGACCACGT
CTCAAACCGACTTGGTTTTCAAGTCGTGTACTTACCGGACAAGAAATTCTTAAATTGTCT
GCCAAGACATAAAAATAAAATGGCAAAAGGTAACCGCGCCCCCGCAAGGCATCGAATCGG
AATTTGGCGGACCATTCACGCGCATGTCGCACGTACGCGTCGCGCCGCTCTGTCAGGCGA
GGCGAGCGAGCAAGTGTGGTTCTCTGCTTTCTCTTCTCAACACACACTTAGAGTGGTGGG
GAGAACTTATTATATAAAGAGGTCCAACATTTCCTCCACTAGCGATATGAGACTAAACTT
TAGCACCACCACACCACGACTTGCCATTTTATTCATGTGCTTAATGTAAGATTTTAGAAT
TTTATAGATGGGACAAGTCCATTAATTCTAACACTTCCTCCTTGGGGCTCACAATGCTTC
ACATGTGGTGGTTGTTGTCATTGTGCATGGATGGATGGATGGATGGATGGATCTCATGAA
TCATGATGCATGTGTTTGGTGGTCATGGATGACGTACGACATGCACTGCATTTTGTTTGG
GATTTGGCTTGTCCTCCTGGCTGCCTCCTGGTGCGTTCGAGCAGGCAGAGCACATGCACC
GCACCTACCTACTTACCCGTCCCGGCTTCAACCAAAAGCAAAAGGCGCGCCCGGGTGGGC
GTGCTATTAAGTCATGTACAATGATGTTATCTTAGAATAAATGATGAGGTGAAGCAGAGA
GAATTTGAAAAAAGGCTTTGTCTTCTCTTATTTAAGAGAAGACAAGAGGTGATCTCTTAG
CACAATATGTCTCACCATGTTTTTACAAAAAGCTAATTATAAAAGATAATGCTAAGAGAT
GGTTCATTGTAGGCTTTCTTTTTAATCATCTCTAAATTACATGCAAGATTTAAGACCAGA
CTATCTTATTAACCATTGTACATGCCCTTATATTGAATGTTTACCTTCCTCCGTGTTCCG
ATTGTCTGGATCTTTAGACCCGCCTTATGCCTAAATAAAATTTGATTTATTAAATAGAAA
TTATATGACATAAATATCACATTATTATTGGATTTGTACTTAAAAGAAGTTCTCAATGCT
ATTATTGTTGTTAAACTCATGTTTTCTTATGTAAGTGTATCGTTAAAGTTCAACTCAAAA
TGTGAGCGGTTACAACAAAACCGAACGGAAAGAGTAACACACACCACACACACCACGACC
ACCACCACCACACACACGGACACGGACGGTCCACAACACGTACGGGCATGCTAGCCGTCA
TGACTTCCAAATCCACATACTCCAAATAGCACATGTGTGTTCATACTAGTAGATAGCTAG
GGTCCGGTGGGCGAGAAGTGGTCATGGTGGCTCACCATGGACCATGGTTATTTATCCTTC
TGATCGAAAGCACCCTTCCAACATATTTAGGCTCAGAATCTATATGTTTGCACCCTTCCA
ACATATTTAGGCTCACAATCTATATGTTTGCACCCTTCCAACATTTTATTTTCTTACTTC
TTCGGTTGCCCCCGCGCTCCTTCCGTCCTGTTGCTACATATGCTCCTTTGGTTCCGAAAT
ATAAGATCTTTTAGGCCTTATTCGGTTACACCTCTTCTCAAGAGGTTTGAAGGGGATTGG
GGTGAATTTTAACTTATAGAGGATTATATCCACCTTAATTCTTGTCAAACCCCTCCTAAA
TTCCTGTCAACGAACAAGGTCTTAGAGGTTTTACTAACCGACTACATAATGATGTATATA
GATATATTTTAAAATATAGGTCGACTCATTTTATTCCGTATGTAGTACATGACGAAATCT
TTAGAAGATTTTATATTTAGAAACCGAAGAAGCAAGCCGCTGGAAGGGTGCATTTTATTT
TCTTACTTGTTCGGTTGCCCCCGCGCTCCTTCCGTCCTGCTGCTACATATACTCCTTGTG
TTTCGAAATATAAGATCTTTTAGGCCTTGTTCGGTTACACCTCTTCTCAAGAGGTTTGAA
GGGGATTGGGGTGAATTTTAACTTGTAGAGGATTATATCCACCTTAATTCTTGTCAAACC
CCTCCTAAATTCCTGTCAACGAACAAGGCCTTAGAGGTTTTACTAGCGGACAAATAAAAA
TGCATATAGACATATTCTAGAATGTAGGTCGACTCATTTTATTTCTTATGTAGTTTATGA
GGAAACCTGTAAAAGATTTTATATTTAGAAACGAATGGAGCATATACCAGTGCTAACTCC
AAGCCGCCGGCAGGCCTTCCTCTCTCCACTAGAGACTAGCTACTAGTAGTACATATATCT
TGTGTCCATAGGCAGCGTATCTCCACACCAACCGTCACACCACACCACTGGCACACATAG
ACGACCATCCAGCAGCGGAGAGCTAGAGCCCCAAACCAAAGGAGAGAGATGGAGAGGATG
GTGATGAGGCTCATGAGGAATAAGTCTCTTCTCGCCGGAGCCTCTAGCCGCGGCGGCGGA
GGACTAGCCTCCTCCTCCATTGTCGACTCTTCCCCCTTCTCCACCCTGCAGCAGCAGCAG
CAGGAAGACCCCGGTGTGCTCAACATCAGGGACACCGCCGCCCACGTACGCCGTTACCTT
TACCTACACTATCTTATCTATCTTCTTCTTTTCTTCTCTTCCTTGAGTTTTAGCGAGCAG
TGATTTATCTCTCTCTCTCTCTCTCATGGACCTTAATTAATTAATTACGGATATGTATGT
ATGTATGTATAGCTCATCGGGCGGACGCCGCTGGTGTACCTGAACAAGGTGACGGAGGGG
TGCGGCGCCCGGGTCGCCGCCAAGCTCGAGTTCCTCCAGCCCTCCTTCAGCGTCAAGGAC
AGGTTCATTCCATTGCTCATCACCTGCCTTAATAATCAATTCAAACAATCACAATTAAAT
AAGATAACTGCCCATCATTTATTTATATACGAGTACAAGCTAATAATAATAAATCTGACC
AAATTAAATGTCCATCCTATTCCTATATAACTGCTTACAACTAGGTACGAGGTGTCCCGT
TGATTTCATCAAATCAATCACTTGTCCATCCACTGCCTGCCTGCCTGCGAATCAATCAAT
TCTCTTCTCTTCTCTTCTTCTTCTTCTGATGATGATAATATATATCCATCCGGCCGGTGG
ATTAATTGGTTGGTGCACAAGAATCAGCTCTTCTGCTCTACAAGATAGCAAATATACGGC
CGGTCTGATTATATATAATATACAGGTCCTTTTCAAAACAAAAACAAAACAAAACAAAAG
ATAGATAAATATACAGTTCCACATTTTTATCCGTAAACTTTTGACTTGTGTGTATATCTT
GTATCCATAGGCAGGCAGGCAGGCAGGCTCCAACAAGCAGTCTCCATCCAAGCGAAACCA
CTAATAGATTTATTATCATGTACCAATCGCATACTAATTAAACTCAAACCCCACATCGGT
CCTCATGGCATCCTGAGCTAACGACATATATACAATCCTACAATTTCATGTTCACTGACG
GGGACCATCCGGTTAATCTATCTATTAAACATCATGGTCTATACTACGTACACAATGGTT
GGGCAACATCAATCAAACTATTGATATTGCTCTGATCTAGATATATAGCAACCGGAATTA
ACTAAAATACCCTCCCCATCGATCCGGTCGCTTTCGCGGGGAAAATTAAAAAAGGGACAA
GTGGGCTCCGGATCCATATTTCCTTGTCTGCCTCTGCCTGAATGTGATGCATAGATAGAG
ATATAGAGACAGATGCACTTAGTCTTTTCTCCTTGTATACAATTACAAATACAAGTCATG
AGTGACTAGTCCACCTTAATTTTGGTCTCTTAAGTCTTACTACTACTTTTCAGATCTAGC
AGTACAAATTTCCAGATCTACTAGTCAAGCCAGTATGGAAGGGATCTCATCTCCATTATT
TATGTCCACTTCAACTTATTCTACTTACTAGTCAAGCTGACAACCTGGCCAGACTGATCC
TACTTGGGACAATTTGCTTTGTCTGAAATCTACTGCTATAATGAACTTGAATGCTTACTA
TTTATCACCAGCCTATTTATTTTCAATCAGTATTTGTCAAGGAGAGAAGAATTCCACCTA
TGTTTCCATCTTTTATTAATACATATGTAATCCAGGCCGGCAATCTCCATGATTGAAGAT
GCGGAGAAGAAGGGATTGATCACCCCGGGCAAGGTCAGTCGTCTCATTGCTTTCTGGTAA
ATAGACGACTGCGTTAGGCTCTGGAACTAACACAGCAGCTTGCGGTCAAAAAACAGAGAG
GAAATAGCAAATTTAATCAATAGATAAACAAATAAAATCAAATCGAGCATTCGGCATTGA
ACTTTACTTCACATGGAAGTGACACTATATAAGAATGTTAAAACTAGTATCTGAGGCATG
TTGTTGGTTTTCGAAACAGAAATTCAGAGTTTTGTCACTTGTGAAACAGACGACGCTGAT
CGAGCCTACGTCCGGCAACATGGGCATCGGCCTGGCGTTCATGGCGGCGCTCAAAGGGTA
CGAGCTCGTGCTGACGATGCCGTCCTACACCAGCCTCGAGCGGAGGGTGGTCATGAAGGC
CTTCGGCGCGCAGCTCGTGCTCACCGACCCGACCAAAGGGATGGGGGGCACCGTGAGGAA
GGCCACCCAGCTCTATGACAACCATCCTAGCGCATTCATGCTCCAGCAGTTCGAGAACCC
TGCCAACGTCCAGGTGCACTACGAGACCACCGGTCCAGAGATATGGGAGGACACGCTTGG
GCAGGTCGACATCTTCGTCATGGGCATCGGGAGCGGCGGTACTGTCACCGGCGTCGGCAA
GTACCTCAAGGAGAAGAACCCCAATGCCAAGATCTATGGAGTTGAACCTGCCGAAGCAAA
TGTTCTCAATGGTGGCAAGCCAGGTACGTAGCCTATCGGGTTGCAGTCTTCTTCTTCTTC
TTTTAGTTTCTATACTCATGTTGTTGCCAACTGAACCTAAGTGCAGGGCCTCACCTCATC
ACTGGAAATGGAGTGGGATTCAAGCCAGACATTTTGGACATGGATATAATGGAGAAGGTT
CTTGAGGTACGGAATCAAATCCAAACTGGGCTTATGTTCTTTTCATAGAGTGAGTAGATT
CTATATATTTTTTACTGAATCCACGCATGTAAAAATTAACAGGTGAAAGGTGAGGATGCT
GTCAAGATGGCACAACAATTGGCGCTGCAAGAGGGTCTGCTGGTGAGTTGCAAAAATAAA
TTTACCACTGCCTTACCAAAAGAAAATGCATGGTTGGGAAGAAACAAGATGAAGAACAGA
CTCCTGATGTGATTATTGGCTAATGTTAAACTGGACAGATTACATCGAACTGTTGCTGAA
CCCGTGGAATTTTCGCAGGTGGGGATATCATCAGGAGCCAACACGGTGGCAGCGATTGAA
CTTGCAAAGAGGCCTGAAAACAAAGGAAAGCTCATCGTGGTACGACATTACATACCCATA
TCTCTATGAATGAAATTCACACAAAAATATGTTAAAAGATGGAGAAGTTTCAGAAACTGA
CTCACCTGTTGTTCCAGACTGTTCATCCAAGCGCGGGAGAGCGATACTTATCGTCGGCGC
TGTTCGAGGGTCTGAGGAAGGAGGCGGAGGCGATGCAGCCAGTGCCAGTGGACTAACTTG
GAGCCATATAATGCATACGGAATAAATTCACTGCATTACCATGTTGCAAGTGCTAGTTGT
ATGTGCCTCGTTCGCAATTCCTCGGTTTGTTCCTTCATGTGGACATTGTGTAAACAACAG
TTGAAATGGTTGAAAAAGGGACTTTTACCTCTCTGGAGAGTGGAGATGTATGATGTACAT
ATATGTTTGAGTTGTGGGGATCATTCATGGGTCAAGTGATACTATGTGCACCAGTTTCTG
CCAAAGTGAAACAACCGTTGTTCTGTCAGTGTGTGCGCCCTTCCCGGGTGATTTTCACCA
AAGAACGGGGTAAAGTTCACCCGGGAAGTGCGCCCTCCACTATCATTATCTGAACCGATG
ATTAACCTGACTCGTTCCTGCATTTTCGAACACAAATACAATTGTAGACACAAGGAGTAG
AATTTGCGTTGTCCTCAACTCTTGTTACAGCCGCTGGAACTATGTTGCTCTACGGATTCT
GATATGTTAACGTAATGACAATGGATGCCGGGGAGAGAGAGAGAGACAGAGAGCCAAGCA
GAGATGGAGCGGATGGTGATGAGGCTGATGAGGAACAAGTCTCTTCTCGCCGCGGCAGAC
TAGCCTCATTGTCCCCCTCCACCAGAGCCGGCGCCGACTCATCTCCCTTCTCCACCCTGC
AGCAGCAGGAGGAGGAGGAGGAGGACCCCGGTGTGCTCAACATCAGGGACACCGCCACCC
GCGTACATCCTCTGCTGCAGCAGCTCCGGCGAGGTCCTACTGATGATTACATCCTCTGCT
GCCCACGTTGTACTTGTACGGTTATACCTCATTTGCAATTCTTCAGTTTGTTCCTTCGTG
TGGACCTCATCTAAAAAAAGGTTCAAATTGTTAAAAAAAAGGGACCTTTACCTCTCTGGA
GATCTATGCGCATCAATTTTTGCCAAAGTAGAACAACCTTTGTTCTTTCAGTGTGCCCGG
CGCCGACGCGTTTTCTCGGGCCGCCTCAGCAGGTGATCCGCTGTGCCGCGTCGTACTTGG
GGTTGCACCAGTGAGCACGATTTGCTGATGCTGCTTCAATCGTGTGGACAGCCTCGTTTC
TGATGCTACTTCAACCGCGTGGACAACCTCGTTTCTGATGCTGCGCTTCTGGTTCAGGTT
CCCGCCTCCTCTTCTTGCCTTGTTCGGTTTCATCAGGCAGCAAGGCAGTGACATCAAATG
GATACCGTCTCCTTTCTCGTCCTCCTCTTCTCGCCTTCACACCAAGGAATGAACTCTACC
TGGCTTTGTGTTCAGAATCGCCTGGGATGTGTGGCCTTCACAGTCATCATCGGAGTTGAT
GATTATTCTGGCTGGTTCCTACATTTTCAAACACAAGTACGAAGCCAATAATGTATTGCA
CACTGAAAATACAAAAGCTACTGCACAAGAACGCATGCAAAGTTACAGCGGGGGCTGCAT
ATACCAATTCTGTCGTGTGCTTTCTTTCAGAACCAGAACACGGTGGCCATTGGCCATGAA
CTGTAAGCCGTATTGCAACAGGTGCTTTTTTTTTCTGTTAATACCATCTTTAGTTTGCTC
AAGTACCAATTTCGTTTGAACACAAAAGGGGCCAGGTTTCACTGATTACCTTCTTAGTTC
GCTCCTTCTCTTTAGGATAACTTGAAGCCACCAATTGAGCTGCTTTTACCTTTCCTTGTT
CCACATTCGGCTATGGATCTGCCGCCGTTGTGGAATATAAATGGAAGGTGCAGGGAGGCT
GGCATAACAAACAAGCCTTGTCAGAGTCCACAATCTAAAAAGGGCATAAAAAGCAAAACA
ATGAAGATATATGGTATGCAGTCACATTTGTAATACAACTGTAAGTGAGCAATATAATCT
TCATATAGCATCTCTGCATATCTTCGAATTGTAATACACCTGTTTCAGCAGCAGCAGCAG
CAGCGGACGGGGATACATGAGGAGGAAACAGATAGAGGTGGGGGTACTACATTATTCAGT
AGAAAACAAACATTGCAGTTACGCAACAATGCATCACACATCATCATCTAACCAAAATTT
GCCTGCACCTACCCTAGCCTAGCTTCCCTTACAATGGATCAAGTCTTATACAGCCAAGGT
TACATAAGAAACTATCTATTGATGTGCTACATTCGGAAGGCGGAGGGACGCAATGTCTCC
CTGCTGCATGATGTGTTACATGATGTCCAGCGAGAACAAACAAAACTGCGGGACAAAGCA
ACCCAGGAAGGAAGAGAGATGGACTGGACTAGAGATTTCGCTGCGGCATGACCCTTCCTT
CCGGCGGCACCTTCTTGTCGACGCGGCCCATCTTGCCGGGTGGCCACACCACGTGCGTCA
CCCTCCCCTGCACTAGACCAAGCGGAACCTGCATGCACCACACGACAAAAGGATAATGAA
TATGTTCATCATTCACTGCCAGGACTATGTATGGTTGATTGCCTAGAACAAAATTCATTT
TGCCATGCCATAGTGTGCCAGCACACCATGAGTGTTATGATATGGCCGGTGCGGCAAGAT
GTTTTTGTCAAAACTCTGTCATGAGGATATCACACTTAGGCGTAAAAGAAAAGGACATCA
AACTTAACAGTACATGGTCAGATAGCAAACGTTCAAGAGACTGGTGTCGCGGGATGTTTT
TTGTGTTATAAATTCTTTTATGAGGACACCAAAATCAGTAAATGGCAAGATAGCAAACGG
TCAAGACTATGGCTGATATGCAGCATCTGCTGCTGATATCAAACACACAGGTACGGTTTC
TGCTCTGTGTTTCCCGACCCAAAATTGTGCAACCCAAGAAATCAAACGTTTTCCTGACTT
AACATCAGCCACAAACGTAAGTTGCCCTAGCATGTGTGTTGGTACTTGTTAAACCAAAAA
TACCAAAACACAAGCCAGCATTCTGGATTTGAATGAATTTCAAACTGTAGGTGGACTGTA
TGTAGTCCATCGACAGTGACAGTAACCAAATGAACATGACACCATAGCAGCATAGAAAAT
CGCACCAACACAAGCGCAATTCGTTCTCCATTTAGTACATTATTACAAGCCTCAGCTAGA
TCGAAGCGGAAGATATAAACAGAGGAATACAACAAGGGTGCATAAGAAGAGGTAAGATGG
CAATGCAAGATAAAGACACTCAGAGCAGCTTCAAGTTGGCTTGGTTTCATGTATAAATCT
GAACCATAGCGGATGAAATTTGGGTTTCAATGGAATAGATTGGACTGAGGCTATAGTTAT
AGAGCATATTTACACCACCAGCTGCTACCGTTACAAATTCATATGTTTTTGTGCTCTATT
TTAAGGTTCTAACTACCTAAATTTTGCAACCACAAGTTATCAGTCATTTTCCTGATCCAA
CATCAGCCACAAATACGAACTGCGGTTCAGCAATGCCAACAGCAGCAGCAGCAGAGCAGC
AAGTGGTAGCACTACACATTACAAAGGAACCGCTTTCGCATCGCCTTGAATAAAATCATG
AACACTGGTTATGCCGCCAATCACGAATAATAATAATAGTATGCGGTTCATCGCAGATTT
GCAAAGGGAGAAGAGGAGGAATGTGTTGCTTACGGGGCCGTAGGATCTGGAGTCCCAGCT
TGCGCTGCCATTGTCCCCTTCGACCCAGCAGTGGCCCTCCGGAATCTTGCGGATCTCCTC
CTTGTCCCGGACGCTGATCCAGTCGCCGGGCAGCCCGATGAGCCTCTTGATCGCCGGGCT
CCGGTGGTCCACCGGCGACCTGCGCATTGCAGCAGCACCAGAGGGAGAAGAATCAAGATC
TAGTATCCATCAGCACCAGGATCAAAAGTAGAAGCAGGTTTCTTACACGAAGACGACGAC
CTCGCCGCGGCAGTAGTCGTAGAGGGGGCTCCGCTTCACCAGCGCGTACTCGCGTCCGTC
TGCCCACGCCGGTCAGAGATCGGTGAGGGTGAGGAATATATCCGGTCCGGTGGCGGGTTG
TGTGTGTGTGTGCGTGTGCGTGTGGACGGGGAGGAGGGCTCTTACCTGTGCTGCCTTCGA
AGGTGGGGCGCATGGAGCCGCCGTGGACGGTGGCGAAGGAGAAGTAGCGGTCGGAGATGG
TGATGCCGATGAGGGAGCCGCCGATGCAGGCCTTCACCACCGGCCTCAGCGCCGCCCACG
CCATGCCCGGAGCTCGACCTCCCGCCCACGCCGCTGAGAAGGAAGCGACTGCTTGCCGTC
CAGAGTGAGGAGACGGCGGCGGCGGCGGCGGCGGNNNNNNNNNNNNGGGCGGCGGGGGGG
GGGGGGGCCCAGCGCGAGACGCGTGGGGG