morexGenes - Barley RNA-seq Database

Contig contig_55983
Source Contig contig_55983
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_55983 (8789 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_55983

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_69138	1	1808 bp	MLOC_69138.1	Available	Available	LOC_Os04g47770.1, FRAME:-3, EVALUE:0.0, 13104.m04847 protein cis-zeatin O-glucosyltransferase, putative, expressed
CDS Structure of MLOC_69138

Contig Sequence (8789 bp)

>contig_55983 8789 assembly3_WGSMorex_rbca.fasta
AAGGGAAAACCGACGCAAGCAAGTCTCCGTCAACGTGTCAATTTTTGACGCTGTTGTTTG
AGAAGTAGCATGATCCATGATTAATCCAACCAGCATCACAACTAATTAAACTAACATATA
ATATTTTCACCTGGGCTCATTAAATGGACCATTGACTTCATCCCAAAATTAAACCAACAA
ACTATATTTCAAACTTTGTAAATCATCCTCAAACATGGTTAAAAAAACATGATATGATAT
GATATGGAGCATATGTGCCATAGGTCAATGAAATAATCCTTCCATTCCATAATTTATTGC
ACACATATTTTCTCATAATCAAACTAAACAAATTTTGACCAATTTCATAGGGAAAACTAT
CTGTATTCCAATACTATATAAGACATGATGTCTCTAGTGATATGCATTTGGTATTTGAAA
TACAAATATTTTTTATTTATAAATATGGTCAAAAAGGTTTGACTTTAAAAAAAAATCTAT
AAACACTGCATTATTATGAAACAGAGGGAGTCGTGTCGGATACTCTACGAAACAAAATAG
AAACTATAATACATGCGAAGATGGTATAAACTTTTAAAATAACAAAGTGATGATTACGAA
AGTATAAACTTAGTTTATTATGAAACAGAGGGAGTGTGTCCGATACTCTAGGAAACAAAA
TAGAAACTATAATACATGCGGAGATAGTATAAACTTTTAAAGGACAACGCTAGGGAGCGG
CACCGCACCTGCGTCTTGCCGTGCGGTGGCTCAGTTAATCACCTTTCAATGCAAAAATTA
ACCTCCTATTAATCACCCACTACGTATCTCTCCCATGCATGCATGCGTGCAATGATATTA
TTATGTATAATGAAAACTGCTACATGCATGCAATGATGTCATCAAGATTTCTTTTGATTT
TAAAATTTAAAAAGTTTTATTACAAAACCGTTAATTCAATCAATGATCCGCTTTCACTTT
GACTTTCTCTCGACGAGTTCTTCGAAACTAGATCCCATGTCGACATGTTTCGTCAACTAT
TTTTTTTTATTCATACTTGCCACATCTTTTGACCCCACTTGCCATATTATTAACCACTTA
CTTGCGTAAATAACTTAATTGACACTTTTTAATGTTTTTTCGTACAAAACCATGTAGCAG
TTTTCATTATACATGATATAAAAGCATTGTCATAGGTTGTGTTTGCCAATTTAAATATGC
AAACTTATCATATTTACGTACAACTTTGCAAAAAAAAAAACTATTTTGTGTGCTTGTTAC
TTTAACTATGCCGAGTTATCATATTTATAAATGATGAGCAAAAAAGATTTTTTTGTTACC
GGTTTTAAATATGTTGAGTTGTCATATTTTTGCGCGTAATCGCCTAAGAAAGTTGTTTGT
GCTTGCCATTTTGATTATGTCGAGATGTCATATTTATATGCAATTTCCAAAAAAATTGGC
GATTAAGTTATTTTTTATCAGACAAGTAAGTATAACAAATGTGGTAAGTACGAGCAAAAA
AAAATTGTCAAAACATGTCGANNNNNNNTCTAGTTTTGAAGATTTCGTCGAAACCAAGTC
AACGACGAAAACGATCATCGACCGAATTAACGGTTTAAGAGATAAAAGTTTTTGAATTTC
GATCATTTAAAACGAATCTCATAACGTCATTGCATGCATGCATGAGAAGAGAGCATGGAA
GCCATCCAAAGATTTTTTGTTAATTCACATACAACTTCTTGACTGAACTATTGAAACGCA
CGACATGTCTGAAGATCGGAGAATCTATGATGGTAGTATGAAATGCAACGCTTTTAAAAA
CCGATTTTATGTTTGTTTCTCGACCAACCATGTGCCAATTCCTGCAATCTGAACACTTTG
GTCAAACAAGATATTTTTCAAGATAGTCAAAGATGACATGAAGAATACGTTGGGAAAGGC
AGGAAAGTCTTCTAATCCGTACTCCCCAAGGCCTGAAGACAGTGTCAACCGAAGAAAATA
TTGGGCCACTCATGTTTGTTTAGTACACTATTGTTTCAAAAATTGTGAAACGAAGGGAGT
AGTAACACACAACCCAGAATTTCCTCTCAAGTTATAAAATTCAAGTTCAACTCAAAGTGC
TCAAAGTTTAATTAAACGGAAGGACCCGATAAATCCTGAACGTTTGGATTTTCAGCATGT
TATTTTGAACGTTTTTACATGGCAATTTTAGTTGACGTTAGGTGGCAGCTTTGTCTCAGT
TAATTTACTCAAAAAATTATCATGTTTGCCAACCTCACGTGAACTAAAATGGTCATGAAA
AACGTTCGTATTACATGCTTAAAATCCAAACCTTCGGGATTTATCACTTTCGAAACGGAA
ACTACGGGATTCAATGTAAAATGGCCATCATCATACATCACCTTGTCATGTATGCTATGA
AGTCCTCCAGTTCCTTGTCGGATGATCCGCCCTGAGCCGCGGACGAACGGACGGCCTCCC
CGAGCGCCTCTGCCCGCTGCCTCACTTCGAGCCCTTCATCGGCGACCATCATCGTTTCAA
TGGCCTCCTGTATGGTTGTCGCCGGTATCACCTCGCTGTGTTTCTCCCACGGCCTTACAA
GCAGACCGGCGTTGAGGTAGCTGCACACCAGCTCCGCATCCCACGGCTGGTCAGAGTGCA
TGGGCCAGGCAAGAATGGGCTTCCCGTGGCTCATGCTCTCCATGGTCGAGTTCCAGCCGC
AGTGGCTCATGAACGCCGCCGTGGCGCCGTGCGCCAGGATCTCCAGCTGCGGCGCCCACC
CTGTGATCACCAGCCCCGTGCCTTCGGTCTGCTTGGTGAACTGGGACAGCAGCCTGGCGT
GCCGGTTGTCGCCATCGTCTGTGAATATGTCGCCACGGTCGGCGTCACGCAGCACCCAGA
TGAAGCGCTGCTTGCTGCCGTGCAGCGCCGCCGCAAGCTCTGCCACTTGCTTCTCCCGGA
GCGAGGACGTCGAGCCGAACGACACGTACAGCACTGATGACAGCGGCTGCTTGTCCAGCC
AGTTCAGGCACTCGTGCCGCTGCGTCCTCCCCTGGTTCGACGCCGTCGCCTCGAGCAGCG
GGTTCAACGGCCCGATGGCAAAGAGCTTCTTGCCGTCGCCCGCCATCTGCTCGGCAACAA
CGTCGACGAACTCACCCTCGAGCGCGCGGCACGTGTTGACGATCATGCCGGCGCCGTCCG
AAATCGACTGTCCCACCATCGCGCGTTTGCTGGCGTAGTCCACGAACTCCTCGGACACGC
AGACGGGGAGGTGCGTGAGGCCGTTGTCGCGCAGGAGCCGGTGCCCGGCGTCCATCCGCC
CGACGATGGACGACACGGCCGTGCAGTACAACCCGAAAGCCTCCCCGTTGGGCAGCTGCG
CCGCCTCCTCAGACGCGAAGGCGTTCATGAGGTCGTAAACGACGACGACGCGGCGGTGAG
AAGCAGAGAGCTCGCGAAGGACAGCCGCGAGCGGAGCGCGCGCGCCCGCGGTGAAGGCCT
CGAACATGGGCATGAGGTGGGAGGGGAAGGGCGGGGAGGCGGCGGGGTCCGGAGGCGGGG
AGGCGTAGCTGGAGATGCCGAGGTCGTGGAACTGGATCGAGCGGAGCGCCTCGTCGTCCC
AGCCGTGCACGCGCGCGCGAGCCTGGCGGACGTGCGTCGCTGTTGCCGCGTAGTGCACGT
CCAGCCCGCGCGAGGCTAGCTCCAGAGACAGGTGCAGGAGCTGGTTGAGGTGGCCTTGCG
CCGGGAACGGCACAGCTACGACGGCCACCGACCCCACTGGGTTCTTCCCCTTCCCTTCCA
TTCTCTGTATTGACTGTAAGTGGAGCCGAAAAGAATTGGACGTTGTGGAGCAGAGAGGAG
TACGAGTTATGCAGTGAATGGCGGTTTCTTGTACTAGCCTCTACCGCAGTAGGTAAGTCC
ACTAGTGGCGAAACCAAAGCGCCAATGTTTTTTATCATCCATCAAACCAACTTTATGGGG
ACGGTCTATTTCGTCTCGTTGGAGTCCATACAAATATAAAAGTGCTGGCCCAACATGCGG
ATCCATAGCCATTTCTTGTCCGCTTTATATCTGTATGGATCCATTTCAGTCTCAAATTTA
GAGCTGATTTGGATCGAAAGCGGACACTGAGCCGACATTTTTTTTTGCTCTCTTCGTCTG
CATATGTTTGCTGCATGCGAGGTATGGCCTACCTATCATAGAACAACTTCTCTCTCTTAC
CTTTTCTCTTTGCTGCCCCATCCCATCCATCCACGCACCAACTCATCGATGATGGGCGTG
ACGACGACGTTCCCTCCAGGCCGACGACGCGAAGACCACAGATGCGGATAGCGAGCTTCT
GCGCAGCGGGTATGACGAGTGGCGCGGCGAGACAGGTGTGACGAAGCGAGGCGAGCGGGC
GCGACAGACCAGACACGTGCGGCGGGTGTTGCGGGCGGCGCCGCGAGGCCAGGCGGACGC
GGCAGACGCTGCGAACAACTTGCCTGCCACCACACCAAGAGCAAAGGAGGAGGGAGGGAG
GGAGTGGCAGGTGGCTGGCGCCGTCGGACGACGCGATGTGCTGCTGTCGGTGACGCAGAC
GCCGCACCGGCTGCGACGGAGGGCGCTAGTCACGTGGACGCCCGTGCAGGAGCTCAAAGA
GGTGCGTGACCGGTCGAGCGCCCCGATGGCGCGACGCCTTGAGTGGTATGACCTCGTGGG
GCTTGGCGTGGGCGGGATGCTTGGGGCCGGCGTCTTCGTCACCGTCTGCATCTTCGTCTC
CACGCCTCTGTCCTCCCTTTGCTATGCCTAGTTAGCTGTTCACGTCCCTGTCGCCGGCGG
CACCTTCAGCTACCTCAAGGTAACCTGTGGCTGGCCACGTTGTTGCTACCGCTGCGGCGC
AGGGCGGGGCAACTTGCTACGGGGCGGGGCGAGCTGCTGCGGGACGGGTCGGGGCGTGCT
GCGGCGATGAAGATGCGGAGGCGAGCTCGCGGGGGCGGGGCGAGGCGGCATCGAAGGTTG
CTCACTAGGTGTTCGATCGAATGCAGCGGACATGTACAAAATGTGTCTGCCTTTCATTGG
GCGTGTAGGACGATCCAAACGAAAAAACGGACATGAATAAGCGAACGGACAATCCAAACG
AATAAAAAATGGAAAAAGCGTGTGTCTATTTGGGTCATTCAGTTAGAGTTGCTCTCACCT
ACTTGAAATTTCTTTTGCCATCACTCACCAATTCTTGATCCAATGGTTCAAAATAAATCA
CGCTATTGTTCATCTTGTTCCTCTCTTCCTTATTTCTCCTCCCAAACACCCCCTGCCTAC
GGCATCCTAATCGCAGATCTCCAACACCCGCGTGTGGCGGGCGGTACACAACCTTGTTGT
GCCGCTCTCATCTCACCCCCCTCCTCCCCCCCTCCCGACGCCCCCGTTGTTGCTGGCCAC
AGCCCTGACAATCCCTTTGAATCGGGCACCAACCATGAAAACCTTCTGCAATCCCCTGCA
CCTCCATCCCTAAAATATATAATAGAGTACTAGCAATATGCTCATACGTTGCAACGGAAT
AATTACTATCAGGTTATGCAGGTGTGGCAGATATAAAAAAATACGAATCAAATGCAAGAA
TGACATAAGGATTTTTGAAATGTCATTTCACAAACTATATCTTAGTGATGCCATGATGAG
ATAAGGCACTTTTAAAATGTAATTTCAAAAACTAAAAATGTGATGCTCATAACGACTTGA
TTTGTTAAGGGATCACAACAAAATATTTTTTCGTCGAGCAAACTGTATTGAAGGACCCTG
CCTGAGCTATACTGCTGAATGATGTGTCTCGCCTTAACTTAGCGTAGCGGTGTTTACCAT
AACTAGTATTGTGGTACGAGAATAAACATAACTGTGTATGAAAGCAAAATAGACATTTAG
TCATTTTAATATAGTTTACAAAAACCTAGCCCATAGAAACTTGTGTCAATTTTGTTGGGC
CTCAGCGTTGTACAAAATACGGAAATCTTTTTTACCCGATGCAAGGGAGATCTCCTAGTA
AAAGCTTAATGTAAGCCACAGTTACTTTTGTTCAATATTCATGGATGTGTTTTAATGTTT
GCGAACATTTTCTATAAGTTGATGGACATTTTTTTTTTCAAATTCTTGAATATGCTTTGA
ATACCGGATCATTTTAAAAAATCATGAACATTTTTTATTTCATGAAAATTTATTTGAAAT
CATGATTTTTTATAGTATGTGTGCATTTTCTGAACTCATGAACATTTTATGATTTTCCGA
ACATTTTCTGAATTCACAAACAGTTTATCATTTTCCTATTTTTTCCAAAACTCGCAACTT
TTTTATATGCGAGGGACTAAATAAAATCATGAAACAACCTTTACATATCTCCTAATGCAT
AAGTGACAGTTAATTTTGTTCATTATTTATGGATGTGTATTAACTTTTCTGAAGATTTTC
TAAAAGATGATGGACATGTTATTCAAATTCATAAATATGTTTTGAATATTTTTTAAAAAT
CATGAATATTTTTTATTTCATGAAATTTTATTTGAAATTATGATTTGTTTTATAATATGT
GAGCAAATTTTGAAGTCATGTACATTTTATGACTTCCGAATATTTTTTGAATACACAAAC
ATTTTATCATTTTCGTACTTTTCAAAACTCGCAACTTTTTGATATTTTGTTCTTTTGAAA
TCTGGAAATAATTTAGAGAAGAAAAAAGAAAACAGGAATTAGAAAGTAAAAAAAATACAA
AACAGGGGGCGCCCCGACCTGCATAAGGGCCAGCCCACGCTTAAGAGAGGAAAAAAGGAA
GAGAAAAAGGGGTGAGAACGGGGGATCAAACCCTGGTCTCCCGTGTGGAGAGTTGCAGGG
TCAGCCATCGCACTACTCATGTGTTCTTGTTCTTTTAATGTAACAATGTATAAGAACATA
TCACGTCGACGATTTTTGAAATCTATAAACGAATTTTTTTTGACTTACGGATGGCATTGG
TGGGTAATTTTTGCCAACTTGAGGGGCAAATTTAATGACGTACGAGTAGAAGTTATCCTT
GCTTTATTAGTAGGTATAGATTGGTGATCCCTTGCACGACCCATGACTTCATCCTAAGAT
AGATGGTGGGGTTAGTTCTTCTCCACCGAAACCTAGGGTTGATATGGGTGATGATATGGT
TTTTCACTCTTGGTACCACCAATTGGTTCTTTTCAGCCTCACTGAGCTTCACTGTCTACT
GATAGTTATGGAACTCGATGGCACCGAAAATTCCAATTCGGTGCCACTAATAGCTAGGGG
GTATATATACTCTGCGAACCCGACGTTTGAAATAATCCTTCAAACCTTTCATCCCCGCAC
ATCCTCGCTGTCGTGCCCTCGTCCCCGGGACTTCATCGATTGTATCCCATGCGCCCTCGC
CACTTGAGCCCTCGCCGTCGATGGGAATCACCTCCGCCGTCATCGCCATAGTGAGATCTT
CACCAAGTTAGGATAAGATCTCGGCCCTTGTTTGCGCTCCCATCTCCAAATCTAGCGCTA
ATAGGCTTAGATTAAATCTGTCCATGCTTGGAATGACTCCATCCAGAAGAATTTTCTCGT
ATATTAGAGAACAAAGAAGAACTTAGGGTTAATAGTCCGCAAAATCGAATCTCGGTTTCA
CCGAGTTGGAAAAATCAGTCCTATCGATTTTGGTTTTAGGGCTACTAAGAACAGTTTCAG
TGAAACTGAGTTTCGCTTTTCGGTGGGTTGCCAAGTTTCTGTTAAGGAAAATGTCAGTCT
TGGTGGCTCCAATTTTTTTGCCTCGGTGGAACCGATATCCCTTTTTGCAGAAAGTTAAAA
CTAAATCTTTTAGATTTCAGAACTTGCAGAACTTCTGTTTTTTTGTGATGCTCATCCACT
CTATCTCTTCAAATTATTTTCCCATGGTCTGCTTGTCTGCTTGGTTGTCTATCCGTATGT
CAGGATTAGAGGATAGTTAGAACAACTTCAAAGAGGCTAGTGCTAAGATGGATTCATGCA
CTAGTCCTATGAGGATAACTTCTGACCCAGGTACATCTAGTTCCCATGGTTTGCCCACGG
CAGCTACCAGGTCTAGGAAGAAACTTAATTCAGATGAAGAAGATGTTGATTTTATCCCAG
AGGAGATTATTCCCGAGAAGCAGAAGGAGAAGACCACAATCAAGAAAACTGTGAGAAAGG
AGTATGCCAGACCTGCTCATGTGAGAGTCTCAGAGTATGCTATGCAAGAGATGACACTCA
CCCTTGAGAGAGTCTCTTCCAGGCTAGTCAAGAAGCCTGCTAAGAAGACACAGAGGAAGA
CAACTGTCTATGTGACTCGAAGGCCAGTTTTTATGATAAGAACTCCTGAGTAGAGTGAAG
AGGAGGAAGAAGAGAATCCAGCTGATGCCCCTCCTGCTAAGAATAAGAAGCTTATGGTTG
ATGCTATGCCAAAGAAAATTGCACCCAAGCCTAAGAAGCCACTAGCTCCCAAGAGGACTA
CTAAGGATAAACCTGCAGCATAGAAGAACAAAGGCTTTGCATCGAGAGAGTTTGCTGGAA
AGGAGGAAGAAGATGCATCTATGCCGAGGAAACTGAGACCTCACTTGCCATTGCACAATC
ATGCTCATCTTGTTTCCGAGGACATCAAGAAGAGAAGGGATCAAGGATTGAGGCAGTGGA
GGACTACAGATCCATATGCTATCAGGAGGAGAACTGCTGTTGATCCTCGTTTCCAAACAA
AGGAGTAACAAGATTTATAGGAGATAGTGCTGCTAGACAAGAGTCTTGTAGCCAATGACA
TGAGATATGTGTTGGGGAACGTCGCATGG