Contig Data
morexGenes
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Map Locations of contig_55959 (3952 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_55959

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69126 6 3123 bp MLOC_69126.4 Available Available LOC_Os03g45760.1, FRAME:-2, EVALUE:1e-18, 13103.m04921 protein expressed protein
MLOC_69125 1 477 bp None Available Available None





CDS Structure of MLOC_69126






CDS Structure of MLOC_69125






Contig Sequence (3952 bp)

>contig_55959 3952 assembly3_WGSMorex_rbca.fasta
GTCCTAGCCTTTTAGTGCCCAAACCCATTTGGTCCAGTTCAGTTTTGGCTTTTTTTCATT
TTTGAATTCAGCAACTTTTTTTTCTTTTATGCTGTTAATGGATCTATAAATAATAGCCCA
TATATATAAATGTGAAGCATCTCTAAATGACAGCCCACACCACAAAATTTGAAGCACATT
TCAAGATCTCATAATATAGCCAAAACCTGTAGCACAACCAAAATCTGCTACCAAACCTGT
AGCACAATCTGGTACAAAATTACACAACCAAGTGCACAAAATCTACTACCAAACCAAGTG
CTATCACAAAATCTGCTACCAAACCAAGTGCTATCACAAAATCTGCTATCAAGTGCACAA
AAACTACTACCAAAATCTGTTTTGCTTGATGCGCGATGCTTGGTCAGAACTTCTGCAACA
ATTGAAAAAGAAGACTTTCGCTCTTCGCCTTCTTGTACATTAGCAGTCATCTTCTCTTCC
ATCTCAGTATGAAAGATAATGGAGGGGGGAAGAGAATGGTGACCACCAGAGAGAAGATGA
TGGCATAACTGACCTTGAGAAAAACCTGCATTTGCTATAACAGTTGTAAGTCTTGACGAG
CAGAAACACAACAGACAGAGGAAGTTGTTGCCAGTGCTACATACTTGGAGTAATAAAATG
GAGTAAGCATCATGATTTCTTAAAAGGAACTTTCCAGCTAATCTTAAGTATGCATATTCA
GATTCTTCTCTCTATGTAAACATAAGAACAGAAAGTAACTAATGCATAACCAGACCAAGC
TTACATACAGGTTTTAGGTCTCTGTCAACATCATGACTAAATAGGTTTCATTCTATATTT
ATTTCTTCACTGATTTTAAAGTGTTGGCTTGATGTTGTACAAGTAGTAGCAGAATTCTAC
AGAGGTTATCACTGTCTCACCACCACTTGTTCCTGAATTTTTGTCAGGTAGCAGCAACAA
ACCTTGATACCAACACTAAACATGTATGTCTATGCAATGGGAAAGTGCATGCCAGTTTCT
CTTCCATAAAGCAAAAAGGCTTCAAAGCTACACACAACAATCAATTAGTGTGTTGTTGAA
ATTAGCGTGACATTTTTTTCAATAGCAGTGAGCACCTCCTCTCAATGAGCAATGTAAGAT
TCATAGATGAAAACGACTTAGCCTAAATCATGGATGCATGTATCACCAAGTGTGCAACGG
TCTAATGGATCGAGAAAAGAAAAAGGGCGAGCGCGGAGATGGATCGATGAGTCTATACCT
GCGACGGCCAATGGCTAAATCATGGAGGTTGACGTTGTGGCTGCCGATGATGGCCGAGGA
CTTTGGTTCGTTGAGGATGCTCCTCGACCTTGTGCTCCAAATATTTCTGGCAGAAGTGAT
CAATGTGTTTGCTCCTGTCCATATTACATACATGCATTTGATCTTCATCTTGATGCTCAC
AACCAAACATGAAAGGCTAGGATTTGCACATTATAGAAATGGTTAGGAACAAAATAAAAG
AAAATCTAACAACATATCTAACAATAGATACAAAAAATGAAGGCCAATCTGTGTGCATAA
ATACCAGCAAAACACATAAACGCGTCCATCAAAATCTTCTTTGTAAACATTGGCATCAAA
TCAACACAAACACTAAATTAACATGCACAAAATGAAATAGCTAATACAGGTCAGGTATAT
AGGTATTAAAACAAACAAGAAAGGAACGACAATCTATTTGAACTACTTCAGGTTCGAGCC
ATTTTTGATACTACAATCAATATATTACAACCAGCATTTCAATCCATAGACACCACATGA
CAGAAAAGGTACTAAGGCACTTGCTACATAAAACCAAAGCAAGGAACAGAGCAACCCACA
ATGGGGTAGCAACGACATAAAGATGCAAATAATTAGCCATACAGTAATATTTTTCTAATC
AAATAGGCTAAACCATCGGGCCACTAACAAGCTGAAAAATACCGAGAGCTTAGGGTGACA
CGGGACTTATTGAGTGGCTAGTGGCTACAAGAGCTAATATGAATTAAAAAATTACAAGAG
GCATCAGATCCTTTGATAATTAAGAGTCCATGAGTTGTACATATGTCTAACAAGACTGAG
TGGACATATGATATTCAGGTCTTGAGAGAGAACTGAAACAACCTGCATTGTTACACAGGC
TCATCTCTTCATGAAAAATCCTAGTAGGATGCCCAGAATAGCGGCTACAAGCACGAAAAG
TAGCGAGAAACCGACATTCTCCCTGTTGATTTCCCGTCTTAGGAGACGCCGTAAAATTCA
ATAAATGAAACAATAAACTTTGTCAATATTGAACAAAACTGTACGCCGGCATTTAGATCT
CACTGAAATGCAGAAAACGATGTAACAGAGAAGTAATGAAAACTTGGAGATCAGGAAATA
GGTGCGGAGTTCTGCATTCGTTGAAATCATGAAATGCAATAGTGCTTGATGCTACAAGTG
AATATTTTTACTACAAAGAGCTAGGTGGAATTATGAGGTGGTCATTTATCTGGAATGCAC
AAATTATCGGCAAAGCTTTCTCAAACCCAAAACCCCCCCCCCCCCTACACTAGCATCACA
CAAGGTTGTTTACACCACATAGCCTCAAAATCAGGCAAGCAAAAGCACAAAATCACTGCT
ATATCTACACTAACTCGCTTCCGATTTAACGTGGTTACCAGGAAAAGAAAACAGAGTGAT
TCCTACAAGAACATGCATTCCGATCTAGGGAACAAAGGGGAAAACGAAGAGCAATTATAT
TCCAAAATGCCCGTGTTCTCCTATGAGAGGAACAACAAATGCCCGTGGTCCACCCTTGTC
TATGCAGTACAGTTGCCAGGTACAAAATCAAATTAAATAACTCAAAGGAGAAATGCTTGC
ATAAGGAAAGAAGTGATAAAGCAAATGCGCACTTACCCACTTAGAAACCGTGTCACTCGG
GTACTGTATTACAACACGGCAGTAATCTTCTCCGGCAAACGCTTGCAGTCCTAGACCATT
AGCATCCCGCAATCATTCTAAACAAGTAAGACTCGCCCGAACTAGTATGCTACTAATCTT
ACAACAGAGGTCATGAAGCGGGCGGCACTTCTGAACATAAAACATGAATCCTTTCCAGAC
ATCAAACTCACCCCAATCCTAGATAAAATAAAATTTCGCTTGTAGTATGAATCCTTCCCA
TCTACTAATACTAAACAGCAAGCATCACATTCATTCACATCAATTCACAGAGGAAGTCAT
AGAAGTTATCGACCAGTTTACCATGCCAATCTACCAAGGCTCATGCATGATCCCCATGTA
CAACACAATGTAGCATCGAATTTGCACACAGATGATGACACAGCTGAGCCCCAACTGACA
GGAAATCTGTAATGTGCGGAAGGGAGCAGCAGTAGATCAGCAGCAAGGGGGCGATGTACC
ACGCACTTGATGAACCCTCCCTGCAGCGCGGCAAGCGCCGCCAGGTCCGACTCCAAGAGG
CCGGAGATGTAGATGACGATGGCGGTGGCGCCGGAGAAGATGGCGGCAGTGAGGGCTAGC
GGGAGCACCCGCATGGCCAGGACCAGCGACCTCCGTGCTCTCGACGTCCCACGGCTCGAC
GTTCTCCTGTTCCCTGTCGGCGGCGCCCTCCCTGAGCCGCGCCACCTCGCACTCGAGCCC
GGTGACCCAGCCGGCGACGGCCAGCGCGGTGATGCGGCGCGCCACATCCAGTTGCTCGTA
GGGGTCCCACGACAGCACCGCCAGCACGCCGTCCGGCAGCGCGAACTCCGACGTCCGCAG
CCCCGCCGCGCTCTCCGTTGATGGCATCGTCCGGGTCAAATCCAGAGCTGCACCTCCGGC
CTGTGGATCCAGAGCCTCGTCGCCATGTGCACGAGCTAGGGTTTCGGGTTGCGGGTGAGA
GCTGTGGAGGTTGGACTCGGCGGCTCGGGAGAGGAGAGGGTTGGGTGTGCCG