Contig Data
morexGenes
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Map Locations of contig_55885 (6246 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_55885

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69075 3 3333 bp MLOC_69075.2 Available Available LOC_Os12g29660.1, FRAME:+3, EVALUE:0.0, 13112.m03017 protein DEAD-box ATP-dependent RNA helicase, putative, expressed





CDS Structure of MLOC_69075






Contig Sequence (6246 bp)

>contig_55885 6246 assembly3_WGSMorex_rbca.fasta
AAAAAAAGGGAGGTGGGAAAGGAAAGAAATGGCTCAATCGTGAAAATGAACGGCTCTGGC
TCAATCGTGAAAATGAACGGCTCTCGTTGCTTATGGCCTGAGAGGGCTCAGATTAGGTGC
AGTTTTACTGTTCCAGATAAAATATTAACCTGAATTGTATCAACTGCTCTTTCAAGTTAT
CAAAAGTAACTGTATCTAGATGCCAAGGCACATGACGAGGTTGAAACAACAGATTTTATA
TGCACAACGAGCCTAAGAAACCACCACCCCGCAAAAAGCAAAATCCCCTATGATGAACCT
TCACAGAAAATAACTGAGCTCTTCAAATCCATGCCTTAAATGAACATTTTTGACACCTAT
AACTGAGTTTGGACACCATGACTGAACTTTGAAATAACTAAACTTTATTGACACTAGTAT
TTGTTCCTTAATCCCGAAAGTACAGTTCCACACCCGGGCTCAAATGCTACCGGTGTGAAC
AATAAAAAAAAGAAAAAACATTCAAAAGAATCTAAATCTTTTATGACATACTTTAAGAAA
TGTTTGTTGTGCATGCAAAATTTCATCACTAAATCACATTGTTGGAAGTCGGGAAAAAAA
CAAAGCTCAAAAATGTGTTTGAAATTAACATTTTTTAGAGCATCAATTTTGTTTTCTTAC
CACACCTTCCACTGGTGTTATTTCATGTTAAAATTTTACATGCACAAGAGACATTTTTTA
AAGTATGCATTTGAGCTGAGATGTAAAAACAACGTCTGATTGGCGTTATAGAAGATTTGC
CATCCATGAGGTGCTAGGGAACTTCGGCAGAAGCGTGACCTCCTTCCCCATAAGATACCT
TGGGCTGCGAGTCTATCTGGGTAGGCTACGTCTGGTGCACCTCCAGTTCATCATAGATAG
GATCAAGGCGCGACTCGCAGGATGGAAAGGGAGGCTCATGCACATCTCCGACCAACATGC
CCTCGTGCGATGCGTCCTTTCTGCCATGTCGACCTTCGCAATGTCCGTACTGCCGATACT
GAGCAAGCTGTTAAAAGAGATAGACAAATGCATGCGGCACTTTCTCTAGAGCAAAAACGA
CGATCTTTCGAGAGTTGGCTGCAAGGTAAACTGGAGCACGGTCTGCTCCCGAACCAAGTT
TAGAGGCGTAGGTATCCTGGACCTTCACAGATTCGGGAGGGCCCTTCGACTGCGATGGTT
AGGGATTCCATGGCGCCACCCAAATCGACCGTGGGTGGTCAGAGAGGTACCATGCAGCAA
GATCGACAAGACCATGTTCGTCACGACAACTTTCGTCACCATCGGGGATGGGGGCTCAGC
ATCCTTCTAGCACTCGTCGTGGCTGGGCCAGGCCACTTTGGCGCTGCAATTCTCGGAGCT
ATACAAGCACTCCAGAAGGAAGCAAGGGACGGTTCAAGAGGTGCTTACAGATGAAGTTTG
GATCGAGGACCTGGCACACAACAACAACCACCCACCTGGTTCAAGACTTCCTCCACCTGC
ACCGGTTGCTTCAATAACGAGACGTCCAATTGCTGGACGACACATCGGACCACATTCCCT
GGCGCATGGAGAAGTCCGGCAACTACTCAACGAGATCTACATACTCCATGCAGTTTCAGG
GAAGAATTTCTTCCAGCTATGACAAGCTGATTTGGAAGGCTTGGGCGCCGGGAGGTATGA
AGATTCTTTCCTGGTTAATGTTCCAAGACAGGATGTGGTGCAACGACACATTGCAGCGAC
GGGGATGGCCCAATGAATACTTCTGCCAGTTGTGTGTCTGAAACCTCGATTCTTGCAAGC
ACCTCTTCTGGATTTGCCCGGCTTCACATGAGGTATGGAACAAGATTAGTCAATGAAAAG
GTTGCGGCGCACTCAAACCAAAGGAGGATTGAAGCTGCTATCTGCCACAACCATTGCGCT
AAAATCTCAGGAAGAAACCAAGAGCAAATGGAAGAAGGGAACCAACACGATGAGACCTCT
CACATGTTGGGTTATTTGGCAGGAGCGTAACAAATGCACCTTCCAGAATAAGATCACAAG
CATCACAGATATCATCTCAGGGACTACAATTACAATGGAGCAATGAAGGTTAGCGGGAGC
TAGATGCATTGAGAGCCCCTTTGGGGACCCCCGTGAGAGATACCTCGTTAGGAGCCTTTT
TCAGTTTCTTTTCATTTTATCTTCATCTTTCGTCCCACTTGTGGTTTAACGTCCGCCAAT
CCTCGGATCTTCACCCCCACTTTGTTCTCCCATTGCTTTCTGTATCTTTTTTTAAAAAAA
AACCGTGCGTGCAATCCTTTTTTTTGGGGGACTATATTACAAATCCTTATTTTTGTTAGA
CAATTGGGCCGGCCCAATTCGGACGTTCTCGGTCCGTTCGTCCGCTTGCGAGAGCGCTCC
TGCTGGATTAAACCCTCGCCTCCTCCCCCAAACCCCAACACCCCGCCGCCGGAAAACCTA
ACACAGCCACCCACCTCCGCCTTCCCTGTCCTTCCCAACATGGACCCCGACTTCCGGTTC
GACCCGGACGGCTCCGACGACGAGGCGGCGGGAGGAGCCACCGCGCGGCGCAAGCCCGCG
CAGTCGCCGTGGGAGTTCTCCACGTACGCGGAGTCCGTGGCGGCGGAGCACGCCGCGCGC
CGCACCACCTCCATCGACGAGAAGATCTCCCAGGCCCTCCGGGGCCGGCGCAACCCCTCC
ATGCCTGATGGCTCCGACGACGACGCGGAGGAGGAGGATGCTGATGATGACAGCGACGAG
GAGGCGGCGGTGAAGGGGGAGAGCGGGGACGATGAGGACGAGATCGAGGAGAGCGACGAC
GACGACGAAGAGATCGAGTCGAGCGGCGGGGAGGAGGATGGTGAAGCGGAAGGCGGCGAG
CAAGGAGAAGAAGAGGTGGGGGAAGATGAAGATGAAGATGCTGTGCAAGAGGAAGACGAT
GCACCCGAGCAGCCGGATCCAGCTCAATTCTTCGCGTCGTCCGAAGGAGCTTCATTCAGT
GCAAGGTCGTTTCTTGAGCTCAACTTATCGCGTCCCCTCATTCGAGCCTGTGAAGCACTG
GGCTACCAGAAGCCAACACCGATTCAGGCCGCATGCATCCCTCTGGCATTAACAGGGAGG
GATATATGCGGCAGCGCCATAACAGGATCAGGGAAGACGGCTGCTTTCTCTCTGCCCGTG
CTGGAGCGTCTGCTTTTCCGGCCGAAGCGTGTTCCTGCCATCAGGGTGCTTATTCTGACT
CCAACCAGAGAGCTGGCTGCGCAGGTCCATAGCATGATTGAAAAACTGGCCCAGTTTACT
GATATCAGGTGCTGTCTCATTGTTGGTGGACTTCCAACCAAGGCACAGGAGGTGGCTTTA
AGGTCAAACCCTGACATTGTTGTTGCTACTCCTGGGCGTATAGTGGATCATCTGCGCAAC
TCCCTTTCTGTCGGGCTTGAAGATCTTGCAGTTTTGATCCTTGATGAAGCTGACCGTTTG
CTAGAATTGGGTTTCAGTGTTGAAATTGGTGAGCTGATTCGCATGTGTCCTAAAAGGAGG
CAGACCATGCTCTTTTCTGCCACAATGACAGAGCAAATCGATGAGCTCGTGAAACTTTCT
CTGAACAAGCCAGTCCGTCTTGAAGCTGATCCTTCGCTGAAACGCCCTGCAACATTGACC
GAAGAGGTGGTTAGGATACGGCGATCACGTGAAGCAACCCAAGAAGCTGTTCTGCTTGCT
CTCTGCTTGAAAACTTTCAAGGAAAGAGTGATCATTTTTAGTGGGACAAAGCATTCTGCT
CACAGATTGAAGATATTGTTTGGTTTGTCTGGGATAAAAGCTGCTGAGCTTCATGGCAAC
CTTACACAGGCGCAACGGCTTGAGGCTTTAGAACAATTCAAAAAGCAAGAAGCGGATATC
CTGATTGCAACTGATATTGCGGCTCGTGGTATTGATATTGTTGGTGTTCGGACTGTCATA
AATTTTGCTTGCCCACGTGATGTCAAAACTTACCTTCATCGTGTTGGTCGTACTGCTCGG
GCAGGCAGGGAAGGATATGCCGTGACATTTGTTACCGATGATGATAGATCCCTCTTGAAA
GCTATCGCAAAAAAAGCTGGTTCTCAGCTGAAAAGCCGCATTGTTGCCGAGAAACCTGTG
TCTGACTGTGCAAAATTAATTGAGCAACTGGAACATCAAATTTCTAACATAATTCTGGAA
GAAAGGGAGGAAATGGCATTGAGGAAGGCTGAAATGGAAGCAACAAAGGCAGAAAATATG
ATAGCTCACAGGGATGAGATATACTCACGCCCCAAGAGAACCTGGTTTGCTACTGAGAAG
GAAAAGAAACTTTTGGCAAAGGCTGCTAAAGAATCCTTGGATCAAGTTAAAGGTGGCTCT
GCAGTTGTTAGTGCTCAGCAAGCTGAAGATCTTCATCTGAAGGAGAAAAGAAGAAGAGAG
CGTGAGAAAAACCTACCTAGGAAGAAACGCAGAAAATTGGAGGCACAACGGGAGATGCTA
GAGGAGGAGAAGGAAGAGGAGGCAGCTCAGGAAAGAAATGGAGGGAAGAAAGCAAAGAGC
AGCCAATCTGTAGTTGATGTCGCTTATCGTAGGGCAAAATCTATGAAGGCGACGGGCAAA
ATCGGTGTTGGCGCTGGCAAAGGAAAGAATGAGAAGAAGTCAAAGCAACCTGCTGAAAAG
GGCCAAACTAGGCAAGAGGAAATGCATGAGCTGTTCCAGAATGATATGAGTGAATGGAAG
CAGGGTCGTTCCCTGAAGAAAAAGGACAGCTCGTTTGAAAAGAAATCTAAGAATTCCTTC
AAGAGCAAATCAAGGTACAAGAGACGTAAGTAGAAGGCCAGGCCTGTCAACATGTTTGGG
GTTATCACAACTGGGCGGGCACTGCATTCCGTTGTGACATTTTTGATAAGTTTGCCCTAA
AGAATTGCCAGGGTCCTCATGTTGTTCCCTGTTTAGTAGTTCTAAGAATTTTACCCATAT
ACTATGTAATGGCATTGTTCTGAAATTATCTTGTGGTTTTCGGTTCAGCAGTTTATTTTT
GGTTTCTTTCAGTTCGTTTATTATCATCTCCAATTTCCGCTTTTCCTTCTGATTTTCTTT
CTCTGTCGTTCATTTCAGTCTTTTTAGTTTCCTTTCAGGTGTTTTCTTGTATCTTTCTTT
CATTGTTTCTTTTCTCCTGTTAATTTCACACCGCCCTGTTTGGATGTTTGCATTTGGGCC
TGGTATGGCATTTCATCTGGGATGAATATCTCGAATACCACCTTTTGGTTGATCCTGACA
TCCATCTGTGGCATTTGGGTTTGATATCGACATTCATCTGTGGCATTTGGGTTCGATATC
GAGCAACCCGCCCTGAAGGCAAAAACTGCCTGCCCAATTTGGAGCGAATGTGCTCGACAT
TGAGCTTCATACCCTGTCCCATCCCCGCTCAGACACAGGAGGCCTCGCCTGGGCGTGCCA
TAAGGAACGGCGGCGGTGAAGGTAGCCCATCCCGCCCTCCTGGCCAGTGTCTGCCGCCAA
CTTTTTTCTCCTCCTGGTGAAGCGGTCTCCTCATCTATCTCTTCTGTGCAGATACGGTTC
AAGCTCAGCTCTGGCGGCCGGCATGCCTCCACCCTGAGCTCTGCTGTCGGGTGCAGTTGT
ATTGCTGATCACCTCCCTGGCTCCCTCCCCTCTTCGTAGATCTCCGACCCTCTACCCTCT
CCCTGTACAGCATCCGACGGATCTCCTCTTTTGCTTGATCTCTCGTCTTTCTCCTCTGCA
CAACACGAGGACGATATTAAGAAGACCAACTGCGACCTCTACCTCGATAGTATGTTTTTT
GCTTGCTGCCGTGATTACTGCAATGTTGTGCCTGTTGTCAAGTGTGTATTATGCTGTATC
CTGCTACTGGCAGAGCAGGCCAACCTGTTTAGCATTTTTAGTAGTGTTCCTAACTCGTAA
ACTGTTGAAGGACCGGTTATGTTCTGTTTAAGTAGAACCTGAAACTTTTGCACTCACAGC
ACCTTGATTTGCTGGCAATGTTTCGTCGCAGTATCAAATGCAGTATTTGTTTATTGCGTT
GATCTGTGTGCGTTTGCGTGTTAGTGTGTATGCATGAAAGTACACTTGGTCTGAATCTCT
TGCAGGTTTGCACCATCATTTTTGTTGCATTATTTTTATGTGATATATAAGAGCAACTTC
AATAGGGCGATCCATTTCGTCCGCCGCCGTCCGTTTGGGTCGGCGCGGACACAAAAGTCG
ACCCAA