Contig Data
morexGenes
Links



Map Locations of contig_55875 (3083 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55875

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69069 2 1158 bp AK368335 Available Available None
MLOC_69070 1 630 bp MLOC_69070.1 Available Available LOC_Os11g37690.1, FRAME:-3, EVALUE:2e-14, 13111.m03690 protein TBC domain containing protein, expressed





CDS Structure of MLOC_69069






CDS Structure of MLOC_69070






Contig Sequence (3083 bp)

>contig_55875 3083 assembly3_WGSMorex_rbca.fasta
TTGCTTACCAATGGACCAATTTCTGCTACCCTGGTTACCCAACCAAGCCTGAGCGTGTGG
TTGCTTACCAATGGACCAATTTCTGCTACCCTGGTTACCCAACCAAGCCTGAGCGTGTGG
TTGTTTACCAATGGACCAATTTCTGCTACCCTGGTTGGGTAGTAATACCATTCATTCTAT
TTTGTGGACACAAAAACAACCATGACCACACAAAAAATAGCAGTAGGAAATATGCATTGT
GTTGGATGGCTTCCGTGACTAAACCTTGTTTTCAACACCTTTGAACATGGGCATGGTATC
ATTAAACAGAATGAAATGACATCTGAATCATACTGAAAAAATTCAGCCTGGGATACTTTT
AAGGCATTGAGGCCAACTGTACAACACACACTACTGTACTGAATTTGGCCCGTAGAGCAC
TAAGGACGAAATGAATAAATAGATCAAATGTTTTAGATTAGTAGGACATCAAAAAAGAGT
ATTTACTCACCTCCCAAAGGTACAAGGAGTCCCCGAATGACAACTCACGCCGAAACAATA
CCATGAACATACGGAATGCAAAGAGATAGTCGCCCCCGCCAAGTGTTTCTGTGTTCAACA
GTCATCAAGCACCAAACCAATTGCAGTGTAATTAATATCAGATGGATATCCAGGCAGATT
GATTGACAGATCCCTCCCTGAGTCTTGATTACACACATACATACCTAGGTGGTCATGTAG
CTTTCGGTCCAACACCTGAATGATAGAGGCAAGGTGCTGAAGCTGGTTCTCAACCCCAAC
AGATTGCTGTGTGCATCTGAAATTCCCTCGCTTTTAAAAATCACAGATATAGATAACGAA
TAAGTGAAACAAGCCACGGTTGAAGACTGTTTTTTTTTTAGGAATCTTTTTTTTTTTTTT
GAGGAACAGGTTGAAGACTGATGGAGAAGCAGTGTGTACCAACCAGTCTACGCATGAGCC
TCTCAAAGCACCAAAACGCGTCTGCTTCGTCACTGAGAAGCACTATCATCGGTGAGCATA
AATCACTCATTCCTGTTTGAGATGTGAAGATGAGTAGATGCATAAGAATGGTGCTTTTCG
TTTCAGGCAATAAATAAGCATTCCGGTGCAAATCCCATAACTTGGCGGAGGTACCTTGGC
AGTAACCAACTTCTTTGTCGATCCACGCGTATACAGCTAGAATATCCCATAACTTGGAGA
GATTCTCTTTCTTGTCATAGAAGAGCATGGAGCGGTCAGTGCGTAGAACATCAAGACCTG
TATATTTATTTATTTATTTATTATACCCACCCACCACCACATAGTCAAGGATAAGAGTGG
GGAAATTAATTAGAAGAAGTTGACATGGTAATCGATGGATGGACTGTACCGATTTGGTGT
AGCGTAAGCTTCCACTGGATGGTGTCTTTATCCAGCTCTCTTCCATTGCTGCTGGTGCTG
GGCTGGTGGTGGTGTGTGGTAGTGGCTTCGAGTAAGACCAAAGGGTCGTTGATAGGCAGG
CCATGGTCGGTTATGATGGGGGCAGTGATGATTTTGCCGCTGCCAACGTGAGGATCCATG
TGTTTGCATTGTTGCTTCCATGTAGCATACTGTATCCTTCTTGCTTGCCTGATGTGGTCG
CGGTCATCGAAGGTGCTGTCGGGATGGAAGCAGGCAAGCAGGAACTCCCAGACCTCTCCC
CTGATTGCTGGGTGCACACCCTACTTGTACTTGTTACTTTGTTATTAGGAAGAAAATTAC
TACTCCCACCGTTCCTAAATATTTTGTCTTTTTAAAGATCCATTCAACTAGGGACTAGAT
ACGGAGCAAAAATGATTGAAATTACACTCTAAATTATGACTAGAGTAGAGTACATACCCC
GCTCTGTATCCTGGTTAGAACAGAGGAGATGTTGAGGGATCCGTGGTGCGTGAATGCGGC
GTGCCATTTCCGTACGCTCAGCGTCTTGCCAATCTGAAATCAACATCCATTATTCTTATC
TTGATCTTGAACTTGGTGTCGAAACAAGACAAGAGGAAAGAGGAAAGAATAGACCTTGAT
CTTGAACTTGGTGTCGGGAACGTTGTGTGCGCAGTCGGGGCGTAGCTCGTAGAACAAGTT
GGTGGAATCCGACCCTGCCGACGCCGACGCCGACTCCTTCCCCTTCCCCTTCCCTCTGTG
CCGCCGCAGCATCCTCCCTTCCCGCTTGGATCTTGGGTTTGGTTTGTTCTGCTTGGATCT
TGGTTTGATAGTTTGCTTGGATCTTGGTTTGGTCTGCTTGGATCTTGGGTCTGGTTGGAT
CTTGCTTTGCTTGCTCCTTGTTTGATCCGATTCCGACCTTCCTTTCTTCCCTCCCTTTCT
TCCGGCGGTGGCGGTGGCGGTGGCCGGTGGTGGTGGTGCCGGACGAGATGCGCCGCTTTA
CAGACAAGACGAGAAGAGAAGAGAAGAGAAGAAAAGAGGGAGTCGTGGTAGGAACACACA
CACACCATCCCTTTCCAAAAAAAAAAAACTCAACCCTACCCTCCCAATCATATGCTTGGT
TTATTCATAAATGTCAACAAAATAAGTTGTAAGGCCAATTCCAGCGCGCGACCCCGTCCG
GACGTCCGTTTGTGTGTTTGGGCCGGGCGATGGAGTCATGTTCGGGACTGTCCTGGTATG
CGGTGGATGTGCACCCAACGCGCGGACGCATCCTGTCCGTCTCATTTTCAAATACAAACA
TTAGAATAACCACGGCCCATAGTTCATGAAAGCGGTCTAGATCACGCCGGTAACACAGCC
AGGCACGTCTTCGCCGACAACACACCCACCGGTCGGCAACACAGCCGACCTCCAAAAAAG
AATAGGTTTTTCACCGGCAATAGAGCCAGCGGCCGGCTCACCATGCCATCCTTCAAAAAA
AGAACGGCCACAGCCGATCTGACGCCCTAGTTTAGGCCATCGGCGCCGAACATCTCTTTC
TGTCGGGCCTCGAACCAGCTCCTTGTCTTCTCGCCCATCTTGCTCAAGTCCACGCTCATG
ATCGCCAGCGCCACCTCCTTTGCTTTGGTTGCGGCCTTGGCGGCCTCGATGTCGGGCTGC
CTCTGCCTGGCCGCCTCCTTCAT