Contig Data
morexGenes
Links



Map Locations of contig_55820 (5038 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_55820

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69042 4 1437 bp AK359778 Available Available None





CDS Structure of MLOC_69042






Contig Sequence (5038 bp)

>contig_55820 5038 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGCTTGCAGAAGGTGGGTGGCAAGGGTGGGGAATGGGGCCAAA
TGGTTTCCAAGGTTTTTTTCCTGACAAAACGCGCTTTCATAGTGTTTCACCTTTTTTTCA
AGAACTCATAGTGCTTCACCTGTGTGCATGCAGCTGTGCTGGCCTGTTGGGCCCTTTGGT
CTGTTCGGGGGGTTGGGTAGCTTCGAAGGTATTAGTAGAATAACGTCTAATTTCCTACAA
CATTATAAGCAAAAACGCTAAGGCCTCGCTTGGATTAACGTTTCCAGTCGTTTACATCCG
GTTTAGAATACACGCCTAGACCGGTCGTTTTGTTTCCGGGAGAAAAACAACTATGACCGG
TATTTTACCCCTGTAAAATAAATACAGGTGTACAAATTTACAACCATTCCAAGCAGGGCC
TAAGAACATTCTAAATCTAACAACCAGCCATCACATCATACAGCACTGGATACCCTAAAA
AACGGGGGTGCCTAAGATGGTTACTCTTCGTTCCCAGACTCTTCCTTGGTAAGCTTGATC
ATGTCATCAATCCTTACAATAGTAATGGCCGCTTCAGTGGCGAACTGCAATAGAAATGAA
AATTGGTGAAATAAATCTCAAAAATCACAATCCCATCCCATGAACATAAAGGCAAGTGTA
CCAACCTGAATAATCTTTACTTTGCTCATTGCTGGCTCAATCACGCCATATTCAAGGTTA
TTGCGGACGATTCCTTTCACAAGGTCAAGACCCATGCTGCCCAACACAAGTCAAATCACT
TTTACGAACAGAAGATGTGCAACAGCCATAAAAGAACAGCAAATGGCAAATATATAATGA
AATGTTTAAGTTACAAATGGATTCTACTCCCTCCCTTCCTAAATANNNNNNNNNNNNGAG
ATTTCAATACGGACTACATACGGANNTATATAGACACATTTTAGAGTGTAGATTCACCCA
TTTTGCTCTGTATGTAGTCCACGTTAAAATCTCTAAAAGGATTTATATTTAGGAACGGGG
GGAGCAGATGGTAACCATTACTTCCTTTATCTCAAATTATAAGGTGTTCTAGCTTTGCAT
TAAGTCAAACTTTAAATTTGATCGAATTTGTAGCAATATATATCAAAATCTACAATATCA
AAAAGGTATTTATAAAACTATACTTTATGGTGGATATAATAGTGTTGTAGATGTTGGTAC
ATTTTTCTACATAACTTGCAGAAGTTTGACATCTTATAAGTTGAAACGGAGGGAGTAACT
CAGAAACAAGGCTGGGAGTGGAACTTGAGATGGTACTTGCAAAGAAGAGAAACCAAAGGG
GTAACTGTTTGCATCTTAGTTACGCATATCCTAAAAATTATCACTGTGTTCTTTTATGGA
GTTTGGTTAATCTAATAATACACCCCAGAAGTTTACAATGCTCTAGAACTATCGTCTTTA
TGCAGTAATGAAGACAACAAATTCTTCTAGGTAGTCTTCAAAGGAATTTAAGGTAGAAAT
ATGGTTCACGCAGATAAGTAATGAAGATGATAAATTCTGTAGTTACCTTGAATAGTGTTG
CTTATCAGCCTTTGTTTGAGCAGTATGATGATATGCCCTAAGCTTTGCAACAAGCTCAGT
AGCATCCTTTGCAGCATTAACAGAAAGAACCTGCCACGAAAATATGACGATTCTAACTAA
TATGTTCTGCGGCTAATTCTGCAAGTAATATAATCAAATAGAATTGACAAAACCTTTGGG
ATAATTAACAAAGATTCTGCAAATTCAGCAATCGCAAGTTGTTCCCTAGAGCCAAGAGTA
GTAGCGAGATTTTCCAAGTACACGGACAATGCAGCTTCTACTGCACCACCACCAGCAACT
ACCTGAAAGACCAAGGCATGTTACACACAATCCAGACGATGATAAACTTCTGTGTCCAAA
ACAAAAATACAATGCTTGTTTTACATGTAGAAGAAAATGATGGTTCGAAGCACTTCATTG
ATTGTCTACCAAGAAGTTTCATGATATCAACTTTGTAAGGAATGCCTTAAACAGATATCG
TGATTAAAGCATTAGTTGTTCATTTAGATGATGATTCTTTTTAGGAATATTACAAGGTAA
ATTTTCATTGTTCATGTTCTCCTTTAAGCATGGAAACATTATTTTAGAATTAGGGACTGC
TGCTACAGGAAACATGGCCTCAATAAAAGATAAATAGCATCGTTAAAAGGTAAATACTCC
CTCCGTTTCTTAATATAAGACGTTTTGGCAAGCTGAAATTGCTTGCCAAAACATCAGCTT
GCCAAAACGTCTTATATAGTGAAACAGAGGAATATTAAATATTAGAATCAGGCAGCACCA
CCTAGCAGTTTAACCGCAAGCCACGGAAAGAAACAAAAAGAAGAATACACAAGTCTTGTC
AACATTCTCACATCCCAAAATTTCTAGTTATAACGACATCATTATGTTCATGTATTCATC
CAGAGGGAGCCAACAAGGAACAGTGGCAATAAGTTGTACCATATTGGATTCCAGTGTTCT
CTTCACAATGCAGAGTGCATCGTGCAAAGACCGCTCAATCTCATCTAGCATGTAGTCATT
CGCTCCTCTAAGTATAACTGAGACCTGCACAAAACAAATGCAATTGTGATGCAAATTAAA
GTTCCCGCTCATATCATGACTAGGTCAACATTGGCATAAAAAATACTAACCACACTAGTG
TTCTTTGTGCCTTTCACCAGAATCACATCATCGTCGGCAATTCTTTCTTCCACAACTTCA
TCAGCATGTCCAAGGAATGATGGATCGAATGTTTCTTCACCTTCCATGTCAGCAAAAGTA
CTCACCTGCACTTTTCACTTCATTAGGATGTTGAAGTTCACTTAGGATGAAAAGGTTAAT
CTTATGCTTATTTTATTTCTAAGAAAAATATGGAAAAAATATTCTGAAGTTAATAATTTT
CTGTTATTTGCATCAACTTCACCCCAGATGATAATACAATTTAGCACCTCAAAGTTGTTG
CGCTAGATTAGCAAAGCATACTCAGAAACCGATAAAAACCAAATAAACGTAAAGCAATGT
TGTGAAGGCATTTAGTTCAGATGATTTGCTGCAACATTGCCTTAATCTCTTAAGCACAGA
TCGATCAACTTAGTACAATTGCAATCACAAGTAAGTTCATGGGATTGAAGTCAACAAGTC
ATGAATGAAATTAAAAATAATTACAATATTGAAATACTCAGTACTGCTTCATCATAGCTA
TCGAAAAGGTCCTCACCATTGTTGCACCAGTTGCCTTGGCAACATGACGCAAATCCTCCT
TACGCACACGCCTCACCGCAATTGCTCCAGCCTCAACAAAGTACTGAAATGATGTTTTAT
CACACACAGCAGATTTAGATAGTCACAGGAAGAGACATCTATATATATCCCAATAATACA
GTAGCTACTTTTGAAATCCTCAATTCGATTCGCTCTTTTTGAAATCATCAATTCAGTTTA
ATCATGAAATATAATTTTTTTAAGGAGATAGAAGTCAGATCTAGCACTCAGGAATAGATC
AAGATACTGTGCAATGCATAGGCGGAAAATTCTTGATGCCCCAACCTAACCAAAACTAAC
AGTAACTAGGTAGAATATCAGCAAAAACTGACCAGTGAAAGCAAAGAAATTACGCAAATA
GTTTCTGCTGCGGTGTTGGGCACTATACCCGAAATCATAGTAAAATAGGTAAATAAACAG
CTTATGCTTGAATAATGAAAGCATACCTTCAATGACATATCATCAATTCCCTTGGTGGTC
AATACAACATTAGCACCGGCCTTGAGAATTTTCTCAATTCGCTCCTTTGTTATGTCAGAT
TCTCTGCCAAAAAAAGTAAGGTATTAGGTATACTCTTGAAGATCGTAGAATAGAAAATAA
CTTGTTTTCGAATCCAATGACAGAAGGCATGAGGATCCAGCATAAGAAATGGGGGAAAAT
ATGCTAAAAGGACAAGGTAGAGATAGTAATCGCTGATTCATTCAGGAGATAACAGTAAGC
AGTGAGAATGCAGTGCAAAATTGAAAATGCACATACCTCTGACGGATCTTCTCAAGTTCT
CTTGGATCAGATACAAGAACTTGAACGCCCATTTGCATTTTTGTCTTCTGGAGGTTAAAA
TCAAAACAAGCGATTTTAGCAGCCGTTACTTTTGTAGGCATTCCTTGAGCTGCACGGCCT
GTGTTCAGCGCATAACCATTGAGCATGTAACTTTCCTTAGCGCTTTTACCATGAGCTTTC
AAAATATTAATGCTCTGCAGAAGAAAGAAAAATATAATTGATTAATTATAAGCAAAAATT
TAAGAAATATATCAGAATGTATTTTAAAGAGGACTCAAAAACCATGTTCAAATAGAATCG
TTTAGATGAATCTCAAAAATATAGACAGAACCATGTTAAGGCCTAACAAATACTCCCTCC
GTCCCAAAATAACTGTCTCAACTTTGTACTAGCTGTAGTACAAAATTATATTAAACTTAA
GACACTTATTTTGGGACGGAGGGACTACATAATAAGCCGGAAGAACAAAAGACGCATGCG
GCAAGACAACATGACAAATTGGTATAACAGATGTGCCTGCAGTGCCTACATTGCCCAACA
ATAACATACTCCCTCCATCCCATAATGTAAGACGTTTTTTGACACTAATGTAAGACGTTT
TTTGACACTACACTGGTGTCAAAAAACGTCTTACATTATGGGATGGAGTAGGAGGAGATA
ACATCTAAGCCTATATTTTGAACGAAGCAACCGAGTTAAAAACAACTTTCAGAAATTTTC
TTTTGATGAAGTGATACAGCAAGTTTGTAACCTAATGCACTTTACTTGCCTTGATTGGAT
ACTTCACTGCTCCCTTAGCATTTGTAGTCTTCACAGCTTGAACTGCTTCGACAACCTATA
AAACCATAGCAGTTCATTTAAATAACACGTAGTTTGGGGCAAATTTAACGTAAAGATAGC
TGGACCTTAACATTTGGCCCCAGGGATGACTAGTTAGATAAAAATATCAGACCAAAGC