Contig Data
morexGenes
Links



Map Locations of contig_55799 (4445 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55799

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_69036 2 2969 bp MLOC_69036.1 Available Available LOC_Os03g12450.1, FRAME:-1, EVALUE:0.0, 13103.m01426 protein nucleoporin, putative, expressed





CDS Structure of MLOC_69036






Contig Sequence (4445 bp)

>contig_55799 4445 assembly3_WGSMorex_rbca.fasta
GATGTCAAGCTATCAGCCACTATGTTGAAGTATACAAACTTACATTAATGTCAGATGACC
AAAACATACACGTGCTATGATCAGAGAATACTATTCAATGCATGTATAGTCCATATTCAC
TTCAATGAAAATGCCACTAGGGAAAATCAACGGAAGAGACAACCAAGCAGCAAACTACTA
AAATTCATCTGAATGTCAATGTCGCAGATTCCGTACTGAAAGGGTGAGTTGCTACATAAA
TAACAAAGTGCTCTAGAACTACTATTGCATACATACAAGTATAACACAAGTTTGAACCTC
AGCAGTCTGCAAATTGGTATGAGACAGCTTATAATCATATAAAATAAGCTATGGACCTAA
CCACACCATTTTCTGAGGGAATAAAGGTTAACTGAATTCTAAGATAGAACAATAAGATAA
AGAGTACAAGGAAATAAAGAGACATCATGAACTTGCAAATTATAAAAGCGCAAGAAGAAC
ATTAAGAAAATAGTGGCGTAGAATTAGACCAAACCTGATATTTTGCTTCTATAATTTGCT
TTGCAAGGTCATAAAGGGATCCAAGAAGTTCATCTCTCCGTTCACAGTATTCTTGGGCTA
GCACACCATGGTCCTCCCCACGTTCAAATTTGGCAGTTAATAGACCAATATATCCCTCCA
GTAGCATATCTGTGAGTCCTTCCAGCTGAGACCATAGATTAGATTTCATTGGCATGCCTG
CAGATCCTGATTCTCTCAAAAGCTCCATCACAGATGATGCCAGACTCCAAATTCCAGACC
GCACTACAGGCTGACTGTTCCATGTTGTCAGTCCTTCAGGAGAAGGATACCAGTCCTTGT
ACTCTGCTCTGTAGTGCAATGCTGCCTGAACTAAGGTCACACAAGCATTTGATAACTCAA
GTGCACGTTGCATCTGAACAGATGGGTGTTCTTCTCCGGTTATAATATACCGAAGTTGAT
GCGACAAACAATAAAATAGATCCTCTATATCAGAAACTCTACTGTAGAAAACTTCAGCAT
TGTCACGGTCCATTAATAGAACAGTGTTCCGTCGAGCTTTCTCACCGACCAGCTGAATGA
GATTCCACAGTGCACCAGCAGTTGGGGTTTTAGACTGAGGTGATAAACGTGTGCTTGAAC
TCTGCTGGCTAAGCGCATTTTGTAATTCTCTCAGATGGATCATTCCAGAGAGTTTTTCTC
CATGTTCCATGACACTTAGCATTGCAGCTCCTATGGAATAAAAGCATAATGAAAATTACT
CGGTCAGAAAATGAACTCATAGCACAGTATCAGTTACCCATATGTCTACAAATCGATATT
GTGGTCTCTAGGTCCTATCACATTGTTACAATTACAAATTTAATGATTTCAAGAGAAGGG
GGAGGGGTGTTCAAAGACAAATGCCTAATGATGAACAGATACTATAGCGTACACAAGATA
CCATAATAGAAAGATCGCATCAGTTTTGAAACAATGTGTAATATAGATAGCAGGCAGGCA
AGAACAATTAGTAACATAACCAATGGGCCTGTTCGATTATTTGTAACAGGGATAATACAG
GTCCAAAATAAAAAAGATAATAATGGCAAGAGAAGATCCATACTTTGTTTTGAAGAGAGT
TCTTCATGGCACTTGGACAAGACAAGAAATTGAAGGAATTTCTCGTGTTTTTGACGTTTC
TCAGCAAGGGATGAAACAATTGTTGAAGCAAGAAATTCAGCTTCTCTAGTTGTTGTCCAG
TGCTTAGATAATGTGTTTACGATAGATTTGCTTACTCGAACAAACACATTCATCTCACCC
TCTTTCTCAAATGCCCCTGCTACTCTAAGCTTTTGAAGTGCCTCATGAACAGCACCAGAC
AAAATAAAATCATGAAACAGCCGATTAAGTAACATCTCAGCCTCTTCATCAACCACAGCC
TGCTGAGCTACGCCAGTTAATGTTGGTCTTTGCCTGTCTCCAGCACTCCAAGCCTCAGAG
CTAACTCTTCTGGGAACAATACTGGCACTGAATGCCTGACTTCTCCTTTTCTCTTCAGCG
ACCGCTTCATTACAGCTACCTTTTCGTGATAAGCTGCGTTCTGGAGGCTCAACCCCACCA
ACTAATACAGCCTTTTCAGGTATTGCCCAGATGCCTGCCTTTTCTGTCAGAACAACCCAA
GCTCCTTCATCTCTGTCCTCAGAAGATGGGATAATGGAAGCATCAAAAACCTTTCCAGCA
TCCCAAGGCAGATCAAATTGATACAGTCGGGTAGAGCCCCTCCAATAGATGGCCACCGTT
GCTTTTCCATCACCTGATAAGATGATCACTGAGCCAGAAGGCTTGCCGCCAGTTTTTAGC
CTCATAGAGAACAAAACTTCTTCATCTTCCACTCGAGCTTTCGGGATTATTACCTGAGCA
GGAGCTTTTTTCTCCAAAAACCTTTCACATTTAACCACGTTGTTTTCGGATGGAAATTTT
TGGTTTGATTTGTACAGCATTGTCAGAAGTGAATACTGAGTGTAGTTTGACCCACTCACC
CGATCTTTGCAGAAGGTAGCAACAAGAATATTAAATTCCTTCCCACGCTCATCTATCTGC
ATGTCCAAAAGCCAAATGTTCTTTTGACCAGCTATGTCCTTTTTTATGCCCAACTCACCA
TCACTACCAACAATTTCCTGAGACCCTAATATTTTTACATTGATGCCATGCAAGAGTGAG
ATGCCCCAACATTGTATCCCATGGCTGGTCAACAAAAAGAACTTCCATTCAGCAGCCTCG
GATGATTCATTACTTGGTAGCCAAACCAAGGATCTTCCACCATTATTTTTCTGAGAATGA
TCAGTACCATTATCTTCTAATGTATCATGATGGACTTTTCTTCGGTGAATACCCAGTGGT
GAACACTGAAACAACCATAAAGCACCTGTTGGCTCAGAAGCAACCGCAATACATTCATGA
GCGGCTCCTGGAACGGAAGCTGCAATTAGCGAGTTAAACCTGTAACATCCAGATATGGCA
TCACTTGCAGACGTGCCAGTCTGGCCAAATAAACTAAGAACTGGACCCTTGCTACTACTT
TCATCATAGATATCAGGCCAATACGCAATAGCTTGTGTTCTTCCGTTGCACAGGATGACA
CCAGTCGAACTTCTTCGGTGCAACATATCTCCACTGTTCCTTGTTGATGGACCACTACTA
TGCCATCTCATGATGCAAACCGTCCACTGGTTACCAGAGAGGGGTTTTCCGTCTTTGTCT
CCCACAAGCGAAGACGGGATCTCAAGTGCAAGACAATCTTTTGCAACAGCAGCCAAGTAG
CTCCAGACAAAAAGCTCATTTCCACATATCATCCATGCAAGGGATGTTTCTTTGTCAATG
CCGCCTACAAGCATACTCTTGCCTACAAGAGATACATAAACGGCATCTACAGTTCAGTAT
GGTAGAAGCAAACTAGTAGCGAAAGAAAAATTGTGCAGGGACCCAATAGAAACCAGTTAC
CTGCAAAATTCTTCTGCAGAAGGTTGGCTTGTGCATTCCTCACAACTTGGGGAAACTCTG
CTACGTGCACTGGTTGGATCTGGCCAGAATCGCCAGCCCTGTCTGTCTGCTTTGATGTCG
AAATCCTGAAAAATTTCAGAGAAAAACATAATTTAGAAACATCAGAGATCAGCGAACTGT
GTCAAACTGTAGCCCGCTAGCCTAATACAGTGACGATGGCAAAGGGGTTCCTGGCTTCCT
GCGCATCGCTTCCGGTGCTTCAACTGGATACAAGCATACGGTGAAATGCGGCGATTCTGG
TGAAATCGAAGACAGGTGAGCCGGAATGGTCACCTGGCAAGGAGGGAGGAGGAGGTCCAT
GGGGCCGGGGTGCCAGTGGCGGGGCGGTCGGAGAGGGCGAATCCACCGGGCGAAGGGGAG
TGGACGGGAGCAGGAGGAGGGGGTGAAGGGGTCGCCTCCTCCTTCTCCCTGCGGTGGAGG
TGGGGCTTCCTGATCGCCGGCGAGAACATCTTTGGCGGCGGACGAGCTGTGCTGCAGCCA
CCTCAAGCTCTCCGACTAGCCGGCCTTTTTTCGGCGCTCCCTCCGGTGGGCTAGGGTTTT
ACTAGTGTTTTGAGTTTCTTCCTTTTCCTCTCTTCTTTGCGTTTTGCCCCTCCTTAGAGA
CAGAAATACGGATACGTAACTTGGAGCTCAGGATCTCTTTGTAATACACGATTTTAGAAA
CAGGGAAATGAAAAAAGTTAGGGGAACGCTACGCGTCCGTCGGATGATTTTAAAAATTAT
CCGTCACCTAGCTAGCTGTCGGATTCCGATCTAACGTCCCGCATCGCCGTCGCATGGTCA
GTAGTTATTTCCTGAAATGACGCTCGAGTTGCGGAAACTTTCGCTTTGTTGCAAGAAATA
AACTTTGGATCCGTTAATTCCTGAAACAACGTCGAGTTTCAGAAACAATTTGCTTGTTGT
AGATT