Contig Data
morexGenes
Links



Map Locations of contig_55633 (4770 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55633

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68949 2 1850 bp AK374013 Available Available None





CDS Structure of MLOC_68949






Contig Sequence (4770 bp)

>contig_55633 4770 assembly3_WGSMorex_rbca.fasta
AGCGCGGCTGTTGGAGATGCTTTTACTGTGTCCGCTCCCGCACGCGGTGTATTTGCTGTG
CCCGCTCCTGCCCGCTACCGACCGAAAAATGTTGTTTGTAGTGAACACGCGTGCTGTAAA
TTTAAAGCGCCCGCTGGAGCTCTAACGTCGCGTCATATTCTATAGAGTTTGCTGAAGCAA
GCACCCTGCTGCACGTAAAGAAAGACTATTTTGACGCTGTAAAAATAATTTACCGTGCAG
CGCGGTTGCGCGCCTGTCCGATTGTCTCTCACATCCCACTTCCCTCTCTCTCTTACATCT
TGCAACTTGGGACAACGATATACGTTGAAATAAATATTGAACAAATAATCCGTTTCAACA
TGTGTCCTCCTTTCGACGATATCCCCAAAAGAAGCCTAATGATATTGAATATGCCAAAAA
ATAATTGAATTTTGAATTATCGAAGCACACTCAACGGTGTCGTGCTTCCAAGACAGACAA
AATGGTACCAGCGAGCAGGAGATGTCGAGACGGGACTAGTAGCCGCAGGGCAGGAGTAAT
GAGTTCGAAATCGCTGTCACTTGCTTTGCTTGCCCTGTAGGGTTTAGGACTTATGATTTT
TTCACTGTTTTGATCTATGAGATGAAAATATTACACGGAATGAACTTTGATTAAAAATAT
TTCACGATCCGATCCTTTTTTAGAAACGCCAAATACGTCAGTCTACCATGGCGTTGCAGA
GCCACATTCAAACGCCAGTCTACCTTACGTTTCAGTCCCACATAAAAACGCCAGGGATAC
TGGACGTTGCTGGCCACGCGCGAAACGCCATGGTCCATGGCGTTTCAGCACTGCACATGT
TACTGACCAGAATGCAGCATGTCATGGGTTGGCTGGATGTCGTGTTGTTGGCGTTCCACA
GTGGGTCTGCAACGCCAGTGTTATTTGCGTTTTACAGTGGGTCTGCAACGCCACATTAGA
ATGGCGTTGCAAGAAAGAAAAAAACGCACGATAGACATGCGTTTCACAGTAGGGCAGCAA
CGCCATGGTAGACTGGCGTTGCATAGTGGGACAGCAACGCCATGGCTTGTGGCGTTTTTA
AAAAGATCAGATTGCGAAATCTTTTCAAATCTGATTCATTTTGTCCTGATGTTTAAAAAA
GGTCAAGACAGTAAAAAAAACCCTAGGACTTAGGAGGAGAGATGTGTACTGTACCAGGCA
AGGCAGGCACAGTGCTTCCGGTGGTGTCACGTCGTGGCCAGATAAGGGAGATGACGGGGC
CATGTAATCCAGCTCAGTGACGAGGCCCCATAATTTCCTGGATGTGCGCCCATGCCATCC
ATGGCGCATCTGAGCGCGCATGGATCTCCATCCCTCCGTGGAAACACAAACATAGGTGCA
CAACTCATGCTGAACACGGAGAACACCAAAAATCCAAGAGATGGGAAAAATATTCAAACA
TGTTAAATTTCTTTTCATCGAAAAGTTGATTGATGTGTGTTTCTCGTAAGTACGAATTTC
CACGATGAAATCACGTGCGTGGAGGTCTGAGCAGAAATAAAAATGATCCTCTCAAACGTT
GTTTCTCAAAGCATTTTGGAATGCTGATTTTTTTTTTCTCTCAGACATCAACGGTGCGCA
AATTTACATACATGTAAAACACACATCAATGTTTGTCAACGAAAATCTAGAATTTTCTAG
GTTTTTATTCTTTTTTTTTCATTTTACTGTTCGTCATATACCACATGAACTCAAGCTAAG
AAGAGGACTTTCGAATCATAGGAGTACTTTGTTTCTTCAAAACTCATCCCCACCGTTAGC
TACCAACCTTACTAGAAGGGTTTGCACGCTTTGCTGCTTTATTGGTGTTGTTGGATTTTT
ATTTAAAAAATACTCCCTCTAAGTCAAAATATAAGGTGCATTAGTTTTTAGAAAAGTAAA
ACCTTAATAAGTTTGACCCAATTTATCGAGATATGTGTCAACATTCACAATATCAGATTG
TTATCATGGATTCATCATGAAAAAAGATATTCATATCTTATTATTTTAGTATGGTGGATG
TCCATTTTTTTGGCTCTGAACTTGATCCAAGTTAAAAAATGATTTTGAAAAAGTCAGATA
TATGTTTTGGAACCAAGGAATTATTTGGTGTTGCGCGTGGGGGAGTAATACACTATTTAG
GTGGGCCTCTTGCAGTGTGATTCTGTGCTATCTACTAATGAACTCATACAATTATAAAAA
AATACTGATGAACTCATATTGGTATGGGACATGAACCTTTAGTCTATGGATGTACATACA
TCCTATATGAACATTATTTAGTAATTAAGTAAAAAGTTTAAAATTCCTGAAAATATTTTG
AAATAAACTTGGCCTTTCATTATACTTGTAAAAATTACTTACCCAATCAGAATTCGATGA
CATGATTTTAAATTAGAGACATCAAGTAATTGTAAGACCTTAGAGCATCTACAGGCGGAC
CCCTGAAATGATCCCTCATATGTCCGCGGACACGTCCAATGAGTAACCGGACGGACGAGA
GAAAGAAAAAAAATAACCCAATCGAACACATCATATCGTCCCTTTATGTCAAGGATGTCC
ACGAACCCTCATATCCATCTCAAATATAGTGAGGATATGAAGGCTCATGGATGCGACCTC
ACCCCAAACCATCCTTCCTTATTTATTTCTATTTTTTATCTCTCTTTTTCTCCATTAATC
ACGTGCAAGTGACCGGACATATGAGAAAAAAAAAAGTATGGCTGCGTGGACGGATAAATA
AGGGACAGGTCACTAAGCGGACGCGTCTACAGGCGTTTACGGATCTGAATTTACAAGTCA
TGGCTGAAAATGCTCTTAAAAGTTATGGAGAATATCGTTATAGAGAATTACACCTTGAAG
CTACTAGAAGACTAGCAGTGATGTCCATGATTATGGAACCACAGAGGTAGAAACCGGATT
CCCGCCAGATTCAAAAACATTCAAACAAACCAATTGCTGCAACTGCACACAAGCAAATCA
AGTGGCAAGCCAACACACAGTCGAGATCCCAACGTGATTAATCCTCAGTTCCTCACGAGC
CATCACAAATGCAAATCCCACAACAAGCACCCTTCTCCTAGATCGAGTAGCACGCTGCAC
AAATGGAAATCACAAGCAAAACTCCATGAACTGCATCTAATCCTGGTCCGTCTGCTCTGC
TCTGCTCCGCTCACCATGAATGAAGGAAGGAAGCTCGATCGATTGGTCCATCACGAGATG
GAGTTCCTCCACCTCCTCTGCGCCTTCCTGGCCGCCTCGCTCTGCGCCGCCGCGTGCCCG
TGCCCGCCGGGCCCCGCCGCCTCGGCGCCCGTCATCTTGGCCAGCCTCCCCAGCTTCTTC
CACCCGTTGCTCCACGCCGAGGGCCCCTGCTGCGCCTTGCCGCCGCCGCCGCCGACCTTG
CCGCCGGGCTCGCCTCCCCCCGGGGACTGCGTCACCTGCTTCTGCAGCGCGTCCATGTCG
TGCTGCAGCTCCAGGTACTTGGCCTTCATGCTCTCCAGCTCGAACTTGAGCGTGTTGATG
TCCTTCTTTGCCGCCGCCCATCCCTCCTGGAACGACTGCGGCGTGGCGTCCAGCAGCTGC
CGCCGCGTCGGCGCCGCGCCCCCGTCCGGCGCCGCCTTGATCGCCGCCGACGACCCCGCC
AGCGCGTTGCTGATCTTCACCTGCTCCGAGAAGAGCACCTGCACCACCACCCGCAGCGGC
AGCCGCTCGTTCTGCGCCGCGTGCATGCACGCGTCGAACGACAGCTTCTGGCAGTCCATC
ACCCGGCACAGCCGCTTCCGCTCGTGCTCCGTCAGCGCCGGGTGCGCCTTCAGGTACGAG
TCCACGGCGCGGTACAGCCCGTCGTCGCAGGTGCGCGCCGACTCCGGCAGCGACTCGGCC
AGCACCTGGAACTTGGTCAGGGAGAGGTTGCGGTCGCGGGACACCTCCGAGAGGTAGCTG
TCCAGCAGCCGGGCCACGCGCGCCTTGGCGTTCAGCCCCAACGACGCCGACGACGACGAT
GCCGCCGCCGCCGCGCTGGCCGGGGGCATCCTTGCGCCGGCGGCGGAGCCGTAGTACTCT
CTCTCCGGCTGCGCGTGCGCCTCCCCGCGCCCCGGGCTGTACGACACCTGCTCCGTCTGC
TCCTGCACCAGGAAGTGCTCGACGAGCCGCTGCACGAGGTCGACGTCGTAGGCGGTGTCG
GCGCGGCCGACGGAGGGGATGAGGAGGTCGGGCAGCGCCGCCTGCTCGAGCTGCATGCCG
ACCCGCTTCTCCAGCTCCGTGACGAGCGCCGGGGCGGCCTTGAGCATGATGGCGAGCCGG
AGCAGGCGGAGGAGGAAGCCGCAGGAGACGCTGTCCCGCTGCGGCGGGATGATGCTGATG
AGGCTCTCCACCACCATGCGCTGCTCGCGCGCCGGCGCGCTGGTGGCCACGTCGTCCTTG
CCACCCGGGCCGGCGATGATCATGTGCAGACCGCCGGCCGCCGAGACCTGCGCCCACTGC
TCGTCCACGCCGCCGCCGACGGCGTGGGGCGCGTCCTTGGTGAGCCCCGGCAGCCATTTC
GACGCGTAGTGGGTGATCGCCGCGCCGATGAGGTCGAACCGCATGCCTGTCCGCCGGCAC
AAAAAAGTCCAGACTTTAGAAAAGACAAATTTGTTCGTCCCAAGTAAAAAGAAATCTGAA
TCAAATCTAACGTACGCTGTTACCTTTGACCTTGATGGCGGTGACGACGCGCACGAAGTG
GTCGATCCGGAGCACGGACACGTCCTCGAA