Contig Data
morexGenes
Links



Map Locations of contig_55567 (5235 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55567

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68913 1 722 bp AK249961.1 Available Available None





CDS Structure of MLOC_68913






Contig Sequence (5235 bp)

>contig_55567 5235 assembly3_WGSMorex_rbca.fasta
CCCCCGAGCGCCTTCTTCGTCTTCATGTGAGTTCCCCGGCTCGGCTCGTCGTTCCTCGCG
GTTCGATTCGTGCTGTTTTCCTGTGGCGTCGCGTCCTGACCGAGGATCCGGCGCGTGTTT
CGTCTTGTTCGCAGGGATACCTTCAGGAAGGAGTACAGGGAGAAGCACCCCGACGTCAAG
CTGGCCTCCGTGGTAAGAGAGCGTCTCTGTCTCGTGCTGTTCCTTCCAGCTATTGCTGTT
GCGATGCTGTTCCTTGTGAATTCCGTGTGCTGATTTGGTTTTGGGTTGGTCGAACCGCAG
ATTGGCAAGGCCGGTGGTGAGAAGTGGAAGTCTCTGAGTGACGCTGTAAGTCGCCCGTCT
CCCCCTCCCCTCTCCGTTACCCCTCAGTTTGGTGCTGGTCTCCCTGTGATATGATAGTAG
TGTCTGCTCAGTGACGCGATGGAAATTTAGCCGCCCGTGTGTTGGTTCACCTGCTTCCCC
TTCGCTTTGTCAGTTTGATTTCGAATTCAGTCGCCATGCAATTGTTGATCTCGCTGTTCT
GAAACGTAGAAATCCTACGCCCCGTGTCAGTCAATTCAAACTGCTGCCTGTGCCTGCTTG
TGCCTGCTTGTGCAATTTATTCTGTATATGCAAATCGTTGATCCACCGCCTATGCTCAAT
TTGGTTGTTCAAATTTACCATGGTTCGCCGTGTTTCAAATCTGCACCCTCGTTACAATTT
GTTTATGTACCCTTGTTCGTCAATTCAAAACCGTTCGTGCGATGTTCATACCTGCCCTGT
CATTTTGCACAATGTGTTCAGCAACTATACCGCTCGTGCTTATGGTTATCCTGAGATGTC
TCGCCTTGCACCGCACTAAACATTCTGTCTGCTGTTTGAACGAATCGCAGGAGAAGGCTC
CCTACAATGCCAAGGCCGAGAAGCTCAAGGCCGAGTACACCAAGAAGATCAACGCCTACA
ACAACCCACAGGTATAATCCCCATCTCCACATCCCGTCCTCTCCAAACACAGCCGTCGGA
ACCGTCTCACGCAAACATTGTGGTACTGACCCGTGCTGTTTCGCGTCCTTCTCCGTTTCA
GGCAGGAGAGGCGTCCGGCGACTCTGACAAGTCCAAGTCCGAGGTGAACGACGAGGACGA
CGGCAGCGAGGTGAGACCATCGATACCCACCCCCGGCCGTTCCCTTCGTTACTGAACTTG
TCGATACGTTCTGAGCTTCCGGTACATGAAACATTGACGCTGGTTTCTGATACTTTCTGT
GTCTGAACCATGGTGTGTGCAGGGCGACGCGTGAAGCGGCAGCAGGGGGAGGGTGGTCTC
TGGAACGTCGCCGTTTGATGCTTCTCTGTTTGCCAGTGTCACCGATCGATGATGGATGTT
TGCTGTTAGTTTAGCTCCTTGGTAGTCCCTCCCTCTCTTTCAGGCTCTCCTGCTGCTGCT
GGTGGTAGTAATGGTGGCTCTAGTCCCATGTAGGCATTGTCCTGGATCCGAGTGGCGAAG
TTGCTATAGCCTAGTCGTCTTTCTGTAGGGTCCTGTGCTCGGACCGCCATCTTCTGTTGC
TTCGTTTTTATGCTAGTTCAGTCTCTGTCGAATGTACCTAGTGCCGTGCCCCGTGGCTGT
TTTAAGAATCTCAATATATATGGTGGTTGAAAAGAAAGAAAATGGTCTCGGTACATGCTT
GCTTGATCCCGTGCCTTTGAAAATGTTTCTCTGTGAACCCTCCTGCTGGCTTGGTTGATC
TTGCCAGGTGCTTGTTTGAATCCTGTCCATTTTGAAATGCCTGAATCTTTGTGGTAGAAG
GGAACCATGAACTCTGGGTGTTTGGATGCATGACTGAACATTGTCTGAATTTAGGTCCGT
TGACACATAAGTTCGACTTGTCTCATTCTGGATCTGGTTGCTTGCGATCTTAGCTGCTTT
TGTCATGCAGTGTTTGGAAGATTTCAGTATGCCGGTGATGCGAGCGGTTGCTCTTCCTTG
TCTCGAGTTCGTTACATGGCCTTCTTCCCTACTTTTGGTCTGAAGATTCAGTATTCTGGT
GATGTGCGCTGCTGTATTATGCGTTTATGCGAGCCTTCGAAAAGTTGTTTACATGACGTT
TTCTGAAATTTTGGGGCGGTGAGGGGACCCGTCTTTGAAGGTCTTGTGCTCTCCTGTTGT
GGTTATGCACCTGGAGCTGGATCCATCTTTGTGATTCGAGGGAGACATCAGTTCCATTCC
TCTCTTTAGGCAGCAGCAGCAGGCAGGTTTGACATTACAAGATGTTGTGAAGATGCAGCA
CTACCTAAGATTGCACCGCTGGATACGATTCTCTTGCTGCTTTTGGGGTGATTCTTTTTT
GTCTCGTGTGCAAGCGATTGTTGGAGATACTCTACTCCAGTTTGTTTGCTTGCTGCAATT
CGTTCTTGCATCTGTTTATTCCCCCTGATGAGTGCTTGAGATTCTCTGAAAGTTTGGATT
GTCTGTCTTGGTGTGCCTATGTTTTGCAGCAACTATCCCTCTTGCTAGATCTGATGGGGA
CATGACACCAGTCTGAGCGAACTATTTGTTTCAGATTGGACGGCCAAATCTTTGAGTCCT
CCATATCGATCTTACTATCAGACTAGGGCGATGCGTAGGCCGGTCCGCCCCTTACGGTGG
CGGTTAGCGTAATTGTCGGAGGGGCGATTTCAAGGCGATCCTGCTTCGGCTAGGGTTTCC
TCGTGTCGGCAGGCAAGGCTGATCGATCCCTTCCCCGGCGGGCACCCATCTCCACCCTTC
AGCTGTCGTAAATCACCATCCCAGTCCACCATAAGCCTTCCGCGAGCTAGGGATCGCGGT
CATACACCACAATCTGGCCCTAGGTTTTGGTTTCTCGGAGTTCGGGGGTAAGGAGGAGGA
GGATGGACGATGTGGAGGGGCTGATGCACGGCCTGAAGCTGTCGGCGGTGGAGCGGCGCG
GGATCAAAGTCGGGGCCGCAGTGACAGGCAGATCGGAGCAAGATGGCATGGTTGTTCCAC
AAGCGGTGGGGAAACTTTTCTCGGAGAAGCCGGTCCATGCAGGGATCATTGGCCAAACCC
TCGGGAGGATATGGTGCCCGATCAAAGGGCTGGAGTGCAAGGAGCTGGAGACGAACGTGT
TCCTATTCACGTTCCGACAAGCGGCTGGCTGGAGGAGAGCCCTGGAGGAGGGGCTGTGGT
GGTTTGATAAGGAACTGCTGGTGATGGAGGAGTTCGACTCGGAGAAAACTGTAGATGAAT
ATGAATTCAAACTAATCCCGATGTGGATCCGAGTCTTTGGTCTCCCTCTCGGCCAGATGA
ATAGAGACACTGGTGAACGCATTGGAGCTGATTTTCATGAGTTAGTGGAAGTTGAGGTGG
GATTTGATGGCATGGCTGTGGGGAAATACCTACGCGTCAAAGTTAAGCTGAATATTACGA
TACCGCTCATGCGAGGTTTTGTCCTACAGCGTGAACAGAAGAAGGAGAAACAGTCAGGGA
TGGAGGATGTTGAGGAGGAGGAGACATGACAGAAGAAGAAGAAGGGGCTGCTTTGGTGCA
GGTTCGAGTATGAACATATGCCGGATTTTTGCTATACCTGTGGTGTGATAGGACATGGCG
AGAAGGACTGCCTCACTAGACCGTTGAAAGGGGATGTACCCCAGTTTGGTCCATGGCTGC
GGGCGGAGGTATACCACAGGAAAACTGATGGGGGCGTGTACGGACGAGGACATAATAGTA
GGAGCATAAGTGGAAGTGAGGGAAGCCAGGAGAGGAGAAGGACAATCGGATGGGGGAAAG
GGTCCCGAGGGTCAGGCAGCAACGCGGCGTCATGGAAGAAGGAGGATACAACCAACACCA
GTAGTGATAAGGCTACGAGGCAGGAGGAGACCGAGGTGACTAGCCCGCTGAAGATCACTG
CAGAACGGGGGGAGGATGGGACTGCTAGCAGGGTGACCAAGCGTCTTCCGTTTAAGAGCA
CTCCCGATGATCAAGCACGCTCTGATCGGGTAGATATGGATGTCATTGATGCTTCAATGG
AAGAGAAGGGAATGAGGAGGACCGAAGGTAGTTAGTTGATTGGGAGAGGGGGAGTGGCGG
ACATTGCAGAAGTACAGGGAGACCTACTAGCTGGAGGCGGGGAAGTAGCCGTGTCAAAGT
CTCTTGGAGGAGCTGGGAGGAGGTTCAAACGGAGGGAAAGGGCAGAAGGACAGGGGAACC
AGGAAAGGATGGAGATATGCTTAGGGAAGCGAGGGGGAGCAGAAATGGAGGTGGATGAAA
CAACTGTCATAAAGAAATGTCGTGGGACGGGGGCTGTGGAGCAGGGATCAGAGCATACCA
AAGTGGCAGGGGGTATTATTTCGGAGAGTGAACATTCTCTTTCCATATCGACCGGGTTGC
AAGAGCAACCCCGTCGGGCACAATGAAACTCATAAGTTGGAACTGCCGGGGTTTGGGAAA
TGGCCCGACAGTTCAATCTCTCCTCGAGCTGAGGAGAATGGAAGACCCAGACATCCTGTT
CCTATGCGAAACAAGGATGAAGGAGAAGCAGTTGGGTAGGTTCCGATGGTGGTTGGGTCT
TGCTAACATGGTAGCGTGGAAGGATGAAAGCAGTGGGAGGGGGGTGGCTCTATTCTGGAG
GAAGGACTTGGACGTCTCCCTTCGGTCCTATGAGCGAAGGCATGTCGATGTGGATGTGGT
TAATGAGGAGGGGCTAGCGTGGCGACTAACCAGATATATGGAGAGTCGGCCACGGAGAGG
AAGAAGGAAACGTGGAAGCTGCTGCGTATACTAAAACAACAACACCAGAGTGGGCGCCCG
TGGCTATGCTTTGGCGATTTCAACTAGATCCTAGCAAGCAACGAAAAAAGGGGTGGAGCC
GAACGCCCACAACGCCACATGAACGACTTCCGGGATGCTCTAGATTTCTGCGAGTTGCGG
GACATTGGTTTTGAGGGGGATATGTATACCTGGAGGAACCATAGCCGGCAAGCCTCTTCG
TACATCCGCGAGAGACTCGATCATGCCACCGCAAACAACGACTGGTGTGAGGCGTTTCCA
TATGCATTGGTGCGGCATGGGGACCCAGGACACTCGGATCACCGCCCCATCATAGTCTCC
CTGGAGGGTGCGGACCGTGGATGGAGAAGGAGCGACCACAATTTACGTTTCGAAGCAAGG
TGGCTGCAGGAGGATGGATGCGAGGAGGTCATCTGGAAAGCCTGGGATTGGGGATTCCAT
GAGGAGAAACGGGGC