Contig Data
morexGenes
Links



Map Locations of contig_55559 (6229 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_55559

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68907 3 2905 bp AK368785 Available Available None





CDS Structure of MLOC_68907






Contig Sequence (6229 bp)

>contig_55559 6229 assembly3_WGSMorex_rbca.fasta
GACCGCCCCGCGCGGGCCGCGGCGCGCACGTAGGCCGGCGGCCGCCCGGGAATCGACCGG
TCCATCGCCGGCGGCGGGCCCCGCCTGCGCTGCGCCACCCCACGCGCTCGCCTCTGCGAC
CGGCCCACGACGACCGGCTGCCGTGGAGCCGGGGTCATGTCACGTGACCGCCCGCGCGCG
CCAACAGTGCCGGCCGCGGGGCCCACCCGTCGGTGCCCGCGCGTGCCGGTCACGCACACG
CAGGACGGGCGCTGGGGCCCGCGGGTCAGCCGGGCGAAGATTCCTCGTCCTCCTTCCCGG
CCACGAGGCGGACGCCAGACGGTGTTCGTCACCCGCCGTCGTGGTCGCCGTCACGCTCGC
TCCTCCGGGGCAGACCCAGTCAAATCCGTCTGTTGGTTGGTTAAGCGCGGCGTCAGATGA
GCTTGCTACTAGTCGTGGTAACATGGTTTTTTTTTTCTCTCAAAGTAATCCTAGCCGTGG
CGTTTCGTGGTCAAAGCTTTGCTCACCCGGTCCTCTAGGACAGGTATGCCCTGGTTGGTT
GCGCCCGCCGTGCCGCTCACTCGCTCCCCACTTCCGGCCAGTCGCGACCACGGCAACACC
CATCTCCATCAGTCAAACACCCTCTCCCAGCCATGATCAGCAGCGGCGGTATATGCTAAA
CGGTGGACGGAATCATGCAGGATTCTACCGCATTTTGTTAAGAAAAACTTCCCGAGGACA
GGCCGTTCCAAAGAGACAAGGTAATAAACAAAACGGAAATACGAGCCCCGAACCTGGTCT
CTTGGCCCTTCCGTTGGTTGTTTGCATGGTCCATACGATACGATACGAACCACTGGCGCG
TTGGTACCGTCGCCCGTCCCAAGCCTATCGCCTCGCCACGCCGGCCGGCGGCGCGGGGAG
GAAACGGACGGGACTTGCTTGCACACAACGGAGACCTCGCGCACGCCCCCCACGGCCGTT
GCGGTTGCTTTACCGGCACGGCGGCGCGCTCTCTCTCTCTGTCTTCCCAGCAGCGTGGAC
CGACGGCACGCGCGCCACAGGTCGCCCAGCCAGCCGAGACAGCTACACACACACAGAGAG
TAACACAGACAGGCGTACATGCAGAGCACGAGGACAAAACGGACACCTCCATCCACCGTC
GACCTCATCTTCGCCTCGCCGGCAGAGACGGCACGGCACCTAGTGGCGAAGCGATTTGGC
CGCTTTCTCCCCCACGGAGAGGGACGGGCGAGCCAAGCTGGTTGGCCCGTACGTGTTTGT
TTTCCACGGGAACGGAAGCAGGGCGGAGACAAGGGAGGCATGCGGCAACCAGCGACGGCC
ACCCCCCACCCCCACCACGACGCCTTTCTTTGCTCCCTTCCTACCACTCCACTTTCATCT
CCCTCGTACCAACCAACCCGGCACCAACACCCGCCACCGCGCCGTTCCTTTCGTCGACCA
AACAGCGCCCGATGCGTCCACACCAACGGCCTCCATTTGGCGCCGGTCTTTCTTTCCACC
CGGTGCCGCCAACGACAGATGAGACCAGGCAAGGGCCCCACCGGAGCCACTCAACCGGAC
GGATAGGCGGACACGCTTGCCTTCCACTGCTCCGTCTATGTATATCCATCCATCCGACTG
TTAAATTAATCATGCCGCCCACAGCACATCACTAGATCAGTTGTGCGTGCGTGCGGGATT
GCATTGCACATACGGTGCCGGGCGCCCATCATGCATCCCGGGATCGACACACAGACAGCG
ACGCGCCACCACACACCACCACCACCAGGTCTCGTCCCACTCACACTCTGTAGCCATTAA
TAGCACATTAAACAGGATCGGACGTACATATACCATCGTCTTTGCCATTGTTTCTCACTA
CTACTACTCCCGGAATAGCTACTACTAGTACTGCAGGTCGGTTAATAATACAGGAACTTG
CTTACTTACTAACGCTAGCTAGCAAGATAGTAGATAAATATTTACATCAGGGTGGTTGGG
AAGGGCTAAGGATCAAGCATGCATTCAAGCAGGGGCAACGGTAATAATGAATCTTGGCCC
TAAATCTTAACTGCCAAGAGCAAGCAAACCAGCGGATAAACAATCGCGGAGCGCAGCAAA
GTCTCTCTCTCTCTCTACATTACCTAGTAAGTAGTAGTAATAACTAAATCCAAAGGGTTG
TTGTTTGGGTTGTTGTTGTTGCTGCATCACAAGGGGGAGGGGGCGATCACCAAAAGACAT
CAGGAGTTACTTCATTGGCTGGCTGGCTGGGACCCGTGCGAGGGCAGAACAAGGCTCCCC
GTGCGATACCTCACCTCATGCCTCAATCGGCGTAACGCAACCTGCAGACACCAAGCCCAA
TGACCCAAAGGTTAGTCGCTTTCGGTGGACGATGCTTCTCAATATCATACTAGCGAACAA
TGATATCCTGCGACCATGATGCTTGCACGATCAGGAATCCACCGAGACGCAGTTAAGGTC
AAGTAGAACTTGATGCACCGGAAGGACATCAGCTTAACCAATAGCACGGATTCGAAAGGC
ACGGGCACACATACCTAGTTGGCTAGTTATCTAAATGGCTTGACGCGGCGAGATGAGCCT
TCTCGTTTGCGCCATCAGCATCTGCGGAACCTTCTTCCTTTCTTGGGGTGGATGATTTCG
AGTTCATCTTCTGGACCTCCTCCTTGGTGTAGATGAAGATCTTGCGCACTATGCTGCAGA
ACTCCCTGCTCGCAACACAATGCTATAGTAAGTAACAGGAAGCGGATTTCTGCGGCATAC
GTATCAAAGCAAGCACCAAGATAGATAGATAGAGGGCTTACTCCCATGGATCATCTCCCA
CCAGCATCATGTCACCCTCAGGATCAGTATACACAATCTGCCAGTCTCTGTTTGAAGACA
TCAATTCACCATCAAATTCAAACATCCTGTCTAGCTCAGCAGTGAGTTCGTCATAGTCGC
CAAACTTCGACAGATCCACTGATCTACCAAGCGCAACGCCTTGCTTATGAACCTGCAAAA
ACATGGGGAGTATCATATAAATTAGTGGCCAGACCAAACAAATAACCCAAGAATACACAA
TTAAGCAGACAGGATAATGCAATTGAACTCAGCAACCACGTGCACAGTTTTTAAGAATGT
GCCTCGCCCATAACAACATAAATTAGTGGATCTGTCGAAGCAAGCAGATAACTTATTCTC
AAGTATTGATAGCAAGTATGCTAAAGAGCATAGGGCATCAACACAAGACAATACCTTTGT
GCAACTCCTTGTGGAAGCACCATGGGACTTGCTTTGGACATCTTTCGAACTGTTGGGAGC
TTGCTGAATGCTTTTCTCATTCTCAGTTGTCCCAGCAGTGCTTACGGACAACTCAGGAAT
ACAATCAATGTGTGCATGCTGCAATTGGGTTAATGATGCGGATGCTTGAGTTTGTAGCAC
AGGCTCATGAATTACAGCCATTGTGGAGCTCAAATGGTTAGAAGGGGCACTGGTAGTATC
AACTTTAAACCCAAAAATCTTGAAACCACTGCCTTCTCTCGCTTTCTCCAAGTCAACAGG
AGCAATTGATGCCTGAGGCCGGATCACTCGGGGTTGTTCAACCGGGGAGAACTGCTGCTG
CCTTAACCAATTTGATGGGTGCTCTTCAAATCTGAAACCTTGTGACTGATCTCTTGGATT
ACCGTACACGGTGCTTTGGCTATTCCAGAAATGAAACTCATTGGCCTCTGTGTGCATCTT
TGTGTACGGGTCTGAGAAGTGACGAGCAGAACTGTGATCCTGGAACTGGTTCTTGAATGA
GCCATGACGATTAGGAGCCTCATCAAAGGTCTGCATGAAGAAGCCTTGGGAATCACCAAA
AGATTGAGCACCAGAACTGGCATCCTTAAACGCAGTTTCACATCTTCCCAGCTGCATCCA
ATTTTCCATAGAGGGCCTCTGCTGAAACGCGGATGCATGGTTTTTTCCAATGTTGGGGGA
TGGAGACCACATCATAGGCTTCTGGACAGTAGCATCAGAGTCATTGCTGCCAGTCAGGTT
GTTGGTCCTCAAGGTCATGTGCTCTTGACCTTGCAAGACCATGTTGTTTTGATTTCGTTG
TTGTGCTTGGGCAGAATCCATATCAATCTTAGTTGCACCTGCAAATGGCAGAGACATTTC
AAGAGCGTCACATTTGGAACCTATTTCATCAAGCCTCTAGTAAGAGTAACGAGCTTGTAT
CGTTACCTTCTTTTGTAAGAACAGACGATTCAGGAGAAACTGGAGGAACATTCGGTCTAG
GTCTTTTGACCCGAGAAAGAGGAAGCGGGTTAACAGGAGGCGATGAAGCTGGCTCTATTT
TCCAAGGAGAGACTCTATCCGGACGTGGAATAGTTGACGGCTCATCCCAACGCACCTAAG
TTTCAGAAGCAATCCTCCATGAACATGTGCACTCTTCAAGTTGTACAAGATAACAATAGT
GATCAAACAGTTACCTTAAGAGATCTCCAGTTTGATTCAGGCCACAATTGGTCAAGATTT
TCACTGCCAACTATAGTACCAGTAAACCTATATGACAATGTAAACAGCAAATTAGAAATG
ATCTACTCGGTGCTGTTGGGGGATCATGCACACCAAACTACACTTGTAGGAAAAGCAATT
ACGACAGTCACCTTTGCTCTGGTGCCTCTTCGCCTTCAAACCTCATCCTGAATCTCATCC
CAATTGAATAGTTGTTCTTCACAGACTCCATATATTGATCATATGGTATAATGAACTCTG
AAGGGCTCGTTCTAAAATCGACCAAAGATTAGACAGTAGTGTAAGTACTCAGAATGAGCC
ACCAGGAACAAATTAATGACTACATATAGAAGGGTATGATTGCCTTAGCATTGTTGATGT
ACCTAGGTTTGTAGTAGACCGTGAACATGCTTTTCGTGTTGATAGCGTGCCATGCAGTTG
CAAGGACCCCAAGATGCATGCTATGACTAGAAATGACTGAAGAAGGCACGTTGGACAGCT
GTCTCATAGCCCGCCTAACACCAACACGAAGCTCGCCACTCTCTCCTCTGTGTGGAGCAG
AACACATTTAGCACCAGGTTAAGAATTGCTATGCTGGTGAGTAAGGAAACAGCAACAGAC
CTGAGGAAAATGAAGGCATCCCCAGCTACAAGCCTTTTGGAACTGACAAACACACTCCAA
CCGCTCTGAAGGAGATGCCTCCTAGGTTGCCCTGTTGATTTGCACTCGGTTAACACAATT
ATCATCGGTGCCATCACCATCATCAAGTACAAGATAAACCCTTGCAATTTATAGGCAGAT
TTGATGTGTTGCGGTGTCACTGATTGCAAGCTACAACCAAATGGTCTACTGAAGTTATCA
GCTTCAGATCACACACACTGGGCATACATGGGGATGTAAAACTGCCACAGATCAGAGCAA
GGCACGGAACAGAAACTTACCACGGAAGATATGGCGGAAGCGCCAGTCCATGCCATGCAG
ATCCTTTGCCACAAGCTCTTGTGTTGGGGGCGACTGGGTCATGTCCTGCCAAATAGATCA
GGTCAGCAAATGCCGCAAAAACGAAGGCAACAAGCCCCATACGAATGATCTGGTGTAAAA
ATCGACATATACCAGGGAAGGGAGGCACTCGTCAGCGTGGCGGCGCAGCACGGAGAAGCC
GCCATGCGTGCTGGTGTCGGATGCCGTCAGGGTCTTGCAGAAGGACCGTACCGCCGGCCT
CGGAGGCGTGGCGCCCGTTGTAGAGGTCGACTTGTCCACCGCCATCTCATTTTGCTGAGG
AATTGTTGAGAGGGGAGGGAAATTAGCACCTCGAGCGGAAGAGGACGAAAATACCCACAG
TTTGAACCGGGCGAAATTCACGCTAGAGCTTACCTCCGGCTCCGGCATGAGCATGACCTG
CGCGTAGACCTCGTCGGTGTCCGCCTCCGCCTGCCAAAATCCCCCATAAAAAAATCAGCT
GACCGACTCGAATTTCGGAGCACACAAAACAAGGCCGAGGAAATTGTACGAAGGCGGGAG
GGAAATTGAGCAAGGGAAAAGGGTGAGGGGTAAGCGGGCACCTTGAGCTCGACGTTGATG
ACCCGGCAGAGCAGCTTGGGCGGCAGATCGTAGAGGCGCATCTGGTTGCCGGCGACCTGG
TTCATGGAGGCCTCCACCTGGAAAACCAAAAAAACAGCGCGAGAGCAAGGAAATTCAGCG
CGCGAACCGAAGCAGAAGAGCCTCCCCGCGCCAAATCGCGAGGCGGGGG