Contig Data
morexGenes
Links



Map Locations of contig_55472 (3687 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55472

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68860 4 1777 bp MLOC_68860.2 Available Available LOC_Os11g35020.2, FRAME:+3, EVALUE:3e-60, 13111.m09171 protein yippee zinc-binding protein, putative, expressed





CDS Structure of MLOC_68860






Contig Sequence (3687 bp)

>contig_55472 3687 assembly3_WGSMorex_rbca.fasta
CATCCCCTTCTCCTCGCGGCGGCGACCTAGGGTTAGGTTTAGGAGCTCGCCGCCCGCGTC
CTCGACCTGAGACCGAACGTGCCCTTGCCGCTCCCGCTCATGGTCGGCCCGTGCTGCTCC
TGCTGTTCGTCGCCGGCAGCACACTGCGGCTGCTTGTTTTTTTGTTTTTTTTGCTTGGTG
CTGCTCGCTCGGTTGCTGCTGACATGACATGACATCCTAACATGTATGCATCACCGAATT
TGGTGCAGACAATGGGGAATTTCGCGTCGAGTGACGCTTCTTCTTCAGCCAAAGAGGCAC
AAAGGGCATCAGCAACCAGCTGCTCGCTGCCGGATCTAATCTCCGCGCCACCGGTGGACT
GCTGCCAGGTGCCCAAGGGCTCAAGGAGGAAGCACTGGGACTCTGGGAGCATTCAGGGTA
CGTATGCTTCACCTCTTATTACTTGTCTTGTGCAATTGTTTCATTCTTAATTAGGATTGA
TTGGCGAATCAGATTGGTTGGAGACGTCGGAATTGGTCGGGCCGCGGGTTTACACCTGCT
CCCACTGCCGGAACCACGTCTGCCTCCATGACGATATCATCTCCAAGGACTTCCAGGTGA
ACAACTTCAACAAGGATTATTTGTTTTTATTTGGTGAACAACCTACTTTAATTTGGCCCC
TTCGTTCGGGATCAAGATTGGACGGACAGAGCTTAATAATCAATAAATAGGGACTTTGAT
GGACCAGTTATATATGCTCGACTGGTTAGGGATGTCATGCTAAAATTACTAGTAGTATCA
ACTAGGGACTTCATCAACTTCAGGAGAGGTCCGACGATGCAATCTGAGAACATTTCTGTA
GCTGACTTTAGCTAGCATTTGTGTTTCTGTGCTTACATAGCGGAGTTTCCTTCAGTTAAC
CAGGGAGAGATACTGTGATCTATCTGTACCAGCAATTTGTTGTCAGAGACTGTCACACGA
GCTCCATTCAAATGTCGCGACCTCGATACGCTATGATCTATCCATCTAAATTGTGATTGT
GTTTGGAGGATAAATACATACTGATACTGTCTCTCCTTTGCTCCTTTTGCTGCTGTTGTC
GTATCAACTAGGCACTTTAAATAGGTACATTCATCAACTGCAGTGGAGAGGTCCAGCAAT
ACAATCTGAGAACCAAGTTTAACATTTGTGTTTCTACTTACAATAGCGGAGTTTCACTTA
ACCAACCAGAGATGTGTGATCTATCTATAGCGGAGCTTCAGATGTCAAGACTTTGATACG
ATGCTATGATCTGTCTATCTCAATTTTGCTTGTGTTTGGAGGATAGATACTAGCTAGCAC
CTTTGTTCTTTCGTCTGCTGTTGCAGGGGAGGAATGGCCGCGCGTTTCTCTCCTACCATG
CCATGAACGTCACCACAGGGTCCAAGGAGGACAGGCAGCTCATGACGGGGCTCCACACGA
TTGCCGACATTCATTGCTGTGATTGCCAGGAAGTGCTCGGGTGGAAGTACGAGAGGGCCT
ACGAGGAGTCCCAGAAGTACAAGGAAGGCAGGTTCATATTTGAACAGGCCAAGATCACGC
AGGAGAATTGGTAGGCAAGTAAACGGAAGATTCAACAAGCAATGTGCCAGCCAGAATTAA
TGTTCTTATGACTTTGTACATAGCAGTCTGCCGGTGTTGTTCTTGAACTAGCAGTCTGTC
GATCTTACTAATTCCATGCCATTTGTAACTTGTTGTATGCAGAGACAAAATTATGCTCAT
TTGTGCGGGAACTTAATTGATCATAAATAAATGGATGGTTTAACAATGTGTGGTTGTGTT
TCCCCAATTTTATGGTGCTTCAGCATCAAATCAAATTAAGTAATGTGTCAAGGGTCGGTC
TGTACCTTGTTCAGACTAATTGCATTTTCTCATTGACCAACAAACAGATGGATCATGACA
GGCAACAAAGCACATTCATCCAAATACCGGAGTTGTTTAAACCTTTTTTGGATGCAGTTA
AAGGGGTTATGTGCTGGTATAGTTCTTCTGGCTTATCTGGAAAGTTTACAGTTTGATCGC
TTTATTTGACTTTGAAATCTAACCAAGCTAAGTGGGTACATAGGAAGATGTGGTGTATAA
AAATCCGTTTAAATGTAAAACTGTTTGTGATTGCTGCTGAAAAGGAGCATTCTAACCAGG
GATTATCTTCCTGGAAGATACTGGAAAGGTAAAGATACTAGATGTAGTTTTTGTGATTGT
GATGAATCTATTGAGCACTTGTTCTTTAGACGTACGGCAACAAGGTATGTTTGGGGTGTG
GGTTTGGAGCTCTACAGGCATTAAAGACATGCCTGAGAATGTAGACGGTTTTAGCTTCTG
GATAGAGAAATTCTCTTGTGAAGATAGGCAGCTGGTAGCTGTGATCATGTTTACCCGCGT
GATCTCACTGTTATTGTTTTTGCAGATCCCTCACTGGTTGTCCTATTGGTTCAGATTACA
GAGAGGAAAAGGGCTCCAGGCCGTGGCATCGCTGCTGTGTAAAGTTGCCACGGATTACTC
GAACATGGGCAGAGGATGGCCGCGCCTCCAATGACCCGCAAACTGGGCGTGGGCTGAAGC
TCCTAGCTCGCTGTCTGGTATTATTACATCATCTTTCCTCTTACATCCACTACTCTACTA
CTCCCTCCGTTCCTAAANNNNNNNNNTTTTAAAGATTTCATTAGGGGACTACATACAAAG
TAAAATGAGTGAATGTATACTTTAAAGTATGTCTATATACATTTGTATGTAGTCCTCTGG
TGAAACCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTCGATAACAGAAAAAACAGA
GAAACATACAGGCTACCCAACAGTGAAACTCTAAACGATGAAACTACGGAACAAAGAATC
AACACGACACCTGAACGGTAGCAAAAAACGCAAGTTCGAAAGTATTATCATACACGCATG
CATAGACAATTCGGAATCATCAGTATCCTTTACACAATATCTTCAAGCAAGGAAATACAG
GAGTCCCATATAAGCTATGCCAACTGCGAAACTCTAAACTATATGAAGCAAGGAAATACG
GAACAAACAATCATTACAAGATCTGAGCAGTAGCAAATACAGGAGTTCAAAAGTATTATC
AATTTATCATACACGCATAGACAATTACAAATCATCAATATCCTTTACATTAACTTCAAC
GAAATAGAAATCCCATCATAAATATGCTGCTTCATGCTTCTTCAGAGCTCTTGTTACTCA
TTTGTAGCCCCCTTTCTGGCTCAGCTTTTCCATGTAAGAACGGCAAACACATACATCTGA
TCATATGTCTGGTCAACCACGCGGAAATAAGCAATCCTCCATGCTTTCTTGAACAACAAG
ATGCAGAACACCACCCAGAGACCCAAAATAAATCCTAGAGCGACTCCAAAATAGAAGGTC
ATTGGCTCAAATGAATGTTCGTTCCCTTTTTGACCATCTTGCCTTGCTACATCCTTTTCG
GGGCAACTGTATGGAAGAGGAGTCCCACAAAGACCACTGTTGCCACCGTACATGGAAGGT
TGTTGTGTGTAGAGGGTGTCAAGCTGACGTCCTGATGGTATTCTCCCTGTTAGATTGTTA
CCAGACAAGTCCAAGTAGCTCAAATAGTTTAAATCAGACAGACTCGAAGGGATTATGCCA
GAAAACATGTTCCTTGAGAGGTCAAGT