Contig Data
morexGenes
Links



Map Locations of contig_55451 (9354 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68844 5 4453 bp MLOC_68844.2 Available Available LOC_Os04g47990.1, FRAME:-2, EVALUE:1e-96, 13104.m04878 protein dof zinc finger domain containing protein, putative, expressed





CDS Structure of MLOC_68844






Contig Sequence (9354 bp)

>contig_55451 9354 assembly3_WGSMorex_rbca.fasta
CAAGCTCAAGAGGTAGCAATAGGTTGATGTGTATTCTTCATAGGAGAGATGGAGTTTACC
TTTCTATGCTATTTTACCTTGGAGAGAGCGGTAGGTTCTAGCTTATACTCATCATGTGCT
AGAACCATTTCTGAGCCGAGGATCATTGCACCTGTGCTGAGTAAAAACATAAAATAAATA
CTAAAACAATTTAAAATAATTAATTTTTTTTGGTGATAGATAATTTGATGCGTGAGGTTC
ATTCCAAATTTTGTATAATTTTAACATGCGAGCAGCTCTCGGCAAAAAAGACAAATTCGG
GGTCTCTAAAAAAGTTTAATGTACATGCATAGTTTTGATCCGATTTGTCTTTTTTTCTGA
GAGCTGATCACATGTTCAAATGACAAAAATTGGAGCGAACGTCACGCACCAAATTATCTA
TCATCCCAAAAAATTGGAATTGTTTGAATTTTTTTAATTTTTGTTTTGATATTTTTACTA
AAGGATGTAGATGAGCCTTGGCATCGAAACGCCGCACTCTTATGATTTAACTAGTATGGT
AACAATTAGTTAGTGTTGGTAACTTGTAATATGCTAGATGATGAGTTATGATAATATGAT
GATGAGTTATGATAGTGACGAGTTGTTATATTATTGGGTGTAAAGAAACATGAATTAGAT
TATAATTGATGGATCTAATTAATCAAGTTGAATTAATAGGACGGTATGATGTTGGGACGG
CACACAAGTGTGCATATCAGTTAGCACTTGTGTGTCGTCCCAACATCATATCATCCTACT
AATCCAACTTGGTTAATTTGATCCATCCAATTTATTGTTATCAGTGTATCAACCACTACC
TCTTCATTGATGTCATATAAAAACTTGTATAACGGTGTACAAATAAAAAATAATACAAAT
ACATAATAGTGGTGTTGTATAGAAACAAGCGCTATTGCTATCAGAATTAGTAGTAGCGTT
GTATATAAACGCGCTACTGTTAGATATTAGTTGCAGCGTATTGCGAGTAGAGCTGGCAGC
CACGATACTCATAGGTCAAAAATCAAAGCTACCGGTAACGTTTTTCCTAATAGTGTTTGA
CCGCAAAGCCGAATCAAATTTACGCCTAGAATGGGGCGAGCCAGACCCGAAATAGACATA
TTTTACTGATAGGCTCGTGCGATGGGCTGTCTCGTTTGTTAGGTTTTTTTTTGTTGTTGT
TGTTGCGGAAGGTCTTGTTTGTTAGTTAGGTCCTAAACAGATAGAATTGGATGATTTGGG
GGCGTGCGTATGAGTTGGCCTTGTGGTGTTGATATAGAAGTAGGACTATACACGTATGTT
GTCTCACGTTTTGCAAGCATTGCAGGTGTGTCTATCGCATGTACCTTCTTTTTCAGTACC
TGTATGTGTAACAGTGTGAGTTTAACTCCAAAGATTTTAGTTCTGGTTTCTTGCATTCTA
CGTATCCCCACTCCACCATCCACGATCTGTTGACTTATTGAGCGACAGGGATGTCCCTGC
TTCTTGGTCTTGTTGTTTTCATCTTTTTGGAAGGATTCTTTTCTTGTAGGATAGGCATGC
GCATAAAATCAAACCCACACATATTACCGTTTAGACGTCAATCAAGTGGTGGAACGGTAG
CCATAGGTGGGTAGAAATGCAAGTATTTTTTTTGTTGCCCTAAAGACAAAGGTAATTTCC
CCCGTAAAATAATAATAATATATTTTTATTTGGTTTTGCTGAATCCAAGTCGCCTAGGAT
TTTCATTCAGATTTGCGTACGTGCGAGGTGACCAAGATTAGATTAGACAGGTAAAAGACC
CTCCATTTAGACATTTTGAGTCGACTTATATATAGACAAACTTTATTTTTCATGTATGCA
TCAGTTGCTTGGGTTTCCGGGCGCTACAATCTAAACATGAACTCATTGGCGTTTCTGTGT
GTTGGCTGTGAGGTCAGCTGACCTCACAGCATAAACCACTAAACAATTACTGTACACTGT
GTAGAAAAAATAATAGAAAATTAGCAATGACCCACTGATTTGTTAGGCTGACTTCGCCAC
TGCATGAACTATCACCTTTGCTTGAACTTAATCACCAAAACATAAAACTAGTTGCATCGT
AATTTGCACACCGGGTTAATTAGAGGACTTCCACCAGCTAGTTTAGGTAGAGGTGGTGTT
GCTGGTGTGGTGCTGGCTAATAGCGTATTATTTCTCGTATCGCGACTCACCATGGCGAGT
GAACGAGTCGGTGTCCCTTATCTATGGCTTTAATGTGATTCGAGGTGCAAGAAGGAAGTG
AGCCAACTAAGGTCGAGATTGTTCATCTATTGTCTAGATTGTTTGTTGTTTGTCCAGAGA
AAAAAAATCAATACATGTATGCCACGATTATTGATAGTGTCAAGGAAGTTAGGAGGACAT
GGAGGCGGGAAGATGAGATGAATTGTTGCACCATATCACCTTAGACTGTGCTAGCATTGT
TGGAGCAAGTATAATAGGGTATAGATTTATAGAAGTTGCCACATCATATTTATCTAGAAT
TGGAGGGGAGACAAGAGAAGCTTGATGTAGATATATAGTGAGCTGCAACAAGTTGCAACA
CGGGCTACAACAAGCTTTGTGAGATGATGTGGTGAGCCACACCCTATTTATGCTCATTGC
GAGTGAGCAATTTTTTAGATGATATAGCCACCAGTTGCATACATTATTAGCCATGCTCTT
ATTTATCGATCAACATGGTTTCCACCATGTTTGACTTGGGAGGGTGTTTCTTTATCATTT
ATTTCCTCCGTCCGAAAATATTTGTCATAGAAATAAATGTATGTAGATATATTTTAGTTT
TAAATATATTTATTTTTATACATTTATGCGACAAGTAATTCGGGACTGAGGGTTGCCTAG
TTGTTACACCAACATAGATGTATCAGTCATGTTGGAATGAATGGACATGTGGATTCTAAT
TACCATTGGTTGCTTTGTAAGTTTCTTTTATTTTTTAGTAGGTTATAACCCCCCGTCGTC
TGCATCATTGCGATGCACACAACCATACGTCATAAGTTCATATTCTCAGTAAACAACAAT
CATATGCTTGCATTGATATACTTGCAGTTGCAGACCCCTAAGTGTGTACAACAGACACAC
ACACACACACACACTAGTACCACGCCCCTAGCTAGCTAGATTTGTGCAGATAACTAGTAG
TGGGCGGCAGTGAGGTGGTGATACTTTGCCCTAGAAAGGAAGTTGCGGTACCATAGCACT
GCCGTGGTAAAAGGGTGTGTGTGTGGGTACATCTGCATTTAAATAGCATCCATTTTGCTA
CTGGAAAGCATGCCTGTGTGTAAACCAGCCATTTCAAGCAACTTGCACTCCCCACATGAG
AAAGTACTGGCAATCAGACTTGGACCTAACTCGTAAGTGGATGCACATATGCATGGAAGT
AGTATGCCTGGTGAAAGTGCATTCAGAAAGGGAGCTGGGAGAAAATCAAGAAGAGCTAGC
ACACTACGTAGTACACTTGCATATGCTCTCCAGCCTACCTGCTTCACCTCTTTCCCATAA
ATAAGGAGGTGCAAAGAGCTGCAAGTTTAGGTAGAGGCTGGCTATAAACAGCTTGAAAGA
CGAGGCCCTGGACACCCCCAACCAGATCCATGCACAATGCATAATAGGTGAAAGAGATAC
GTATGTGCTCTCTGAAAGGAAGCGATCGCACCACCATTAATGGGGTGCGGCAGCTAGGCT
ACATGCAACTAACAATGACCTACCATTGCACTAACAATCCTTAAAATGGCATGGAGTGAG
GCAAGGACAGCATGCAGACAAAGCACAAGCCGTAGCATAGAAATAGTACAGTAGTAGAGA
AGAAAACTACCTAGACGTCTAGTACTGTTTTTTCTTTTACAGGATCAGTCAATTAAGCTA
CTTGACAAATGCAGATTTAATAGCATGCAAGCTTAGGTTACCAAGTATCCATTCCCAGTA
GTAGGATGAAGCAATGGTTTAGAAGTAAAAGATGGTAACAGTAGCATATGCAATCATCTG
TAATCCCCACCCACTGACCCACATATCCTTAGTACCAGTAGCTCTTAGATGGATACTACT
ACTACTATCAAGGAGATAACAACAATACCAGTAACTATTTTGCATATGGTTTGCACAGGA
CCATATGTAGCACGTTACAATGAGGCCACCGGATAGTTTGTTTGTTTAATAAAGTGGGCA
GTGCTTCAGCAAGGCAGTCAAGCAATATTCCTTCCACGCCCTCATCCCTAGGGGAATGTT
TTTGGGGCCCTTCCAAGTTCTCCCAAGCCCCAAGATACGGCTGCTGGCATGCATGTGACG
AGCTTGTGTGCTCGCCATTATTAATTCCAGTAACCTAATGAAGGTGATTATACTCTACTC
TGGGCTGGAAGAGGCCATGCATGTACAAGGAAATGACACCAAAATGGGCGGAAGAGAAGA
ATCATTAGGTGACAACTTTTTGGTGTGGGCAGGTGAACTGGGCTTGTGAATGCCTAACTA
GAAACAAAAACAAATGAGTAAAAAGTTGCTGCATTCTTACCCACTTGACATGAAAGGAAG
CGGAGGGAGGAGGCAGAGATAGATGCAAGGAGCATGATGGTGGGAGAGGGCATAGCATGG
ATGGCAGTGTACCTTTAGATTAGGTTTACAAATATATATTATAAGATGGTACAAATGGCC
TGCTCAAGGACCTACAGGTGGCCATCATATGATATAATAATACCATGTGAGGAGAGAGAG
AGAGAAGAGTAAAGTTTCTTTCTTTGAGGGAGTGGGATGTTTGTCATACGTACTTATTCC
CTTCCTCCCATGCCCTCCGGTTCTCCTAGCAAGCAGCTCTCCTCTCTCCTCGCTTTGCCT
CTCGCTAGTGCTTTTCATGGCTGGAAGATTCTTGGTTCCGGGGAGATGGTGGCGAGACAT
GACATCTCAGAGCTTTGCCTGCTACAAGGAAAAGGAGGGCAGGGAGGGGTGACAGGTAGA
AAGACAGGCTTATAAAAAAAAGTGGAGGAACAAGCAGCAAGACATACACCATCAGTTCAA
CTGTGAATGACACACATTGCATGCTCTAAATACCTCTTATAATCAACTTCAGATGAGCCT
ACATGCATATGCATAAACCAATAAAGCTAGCCCAATGATGAAGGGGGACTTGTATATATA
TAGGAAAACAAAGATAATGGTACTCGTACTCATTGTAACCAATAATATAAGTACAAAGTT
ACAAACTTGCAAGTCTCGGTCCCCAAACGATCTGCATCTACACACAAAGCTGAAACACCG
CATGCATGCATGCGTTGTTGTTACCACCAAACAAACTGTAGCTCGGTCCTCTCCCCCACT
GCCGCAAGTCCCCTAAAGTTGGCCCTGCAAACCAAAGGAACCACACCACGACCACATGCG
CCATTGTACCAGGTATGTACCGTACCGAGGCCTAGCTAGCTAACTCCAAGCCAGCCTAAA
AAGAAGCTTCACACATATTAACAGATCAGCATAGTTTAAATGTCGTGTACTCTGATCTTA
TGTGTTAGAGCTAGCTAGCCCCCAAGTCGATAAGCAAACACAAATGAACAGCTTAGAACA
GAAGGAAGAAGAAGAACACCAGAAAGAAAGAAAGAAAGAAAGATACTATCAAACACCATA
TCCACCAATGCCACCACCATCTTATTAAACCTTTGTGCCCTATCTCCAGTTGCAACTTGG
AAGCGCATGCATGCACAGCCGACGCTCCGATCGCATGAGCCATGCATATGCATGGGCGCC
ACCGTGCGCATCGCCACGTTACCAGGTGCCGCCGCCGCCGATCATGCCGTTCCAGAACCC
CGGCGTGTCGGGCTGCCCAACGGGGGTGCCATTGCCTTGTTGCTCCTTGTTTCCTTGCTC
GAACTGATGCCCGCCGCCATCCGCGGCGCCGCCAGACCCACCACCGCTCTCACCGCCACC
GGCGCCACCAGAGCTGGCCGTCGGCTTCAAGTCCTCGAACGCGAATAGCAACCTGCTCGC
CCTATCTTGCATCCCTTGCATCGCGGCGCTGGAGCCGTACCCCGCCGAGGAAGCCCCTCC
CACCGGACCGTGCGCGTCCAGAGAGAAGCCCATCAAGCTCTGGGACTGCGACTGCGGCGG
CGGCGGCGGCGCGCGGAACTCTCCGAGCGAGAACCCCGCGGCGCCGTAGTCTCCGGGCAT
CTGCATCGGCATCTGCAGCGGCATATAGCAGCCGGTGCTCCGGAGAAGCTCCATCGCGGA
GAGCGCACCACTGGCCCGGGCGCCATTGCCCGCCATACCGCCGCCGCCCGGGTTGCACAT
GCTGCTGCTCTCCAGGCTCGGGAACGCCATGTAGTCGGCCTGCGCCTGCATCCCGCCTTG
GTGGTGCGGGAACGCGAGGTTCAGGTCGTGCGCGGCGCCCTCGTGCGCCAGCTTCGGGTT
CTTGTTTGGCGCCGCCCCGAGCATGGACGAGTTCGCGGCGGACGCGGTCGCCGAGGCGGC
CGCCGACGCGGACGCGGAAGACGACGACGACGACCTCTTGTTCTTGCGGGAGCCGCCGCC
GACGGGGACGTTGCGCAGCGAGCCGCCCTCGGTCCAGTACCGGCGGCACGTCTTGCAGAA
GTAGCGCGGCTGCTGGAGGCTGTAGTTATTGTAGTAGCAGAACTTGGTGTTGGTGGAGTT
GCACCGCGGGCAGTTGATCGCCTTCTCCTTCTGCGGCCGCGGCCGCCGCTCCGTGCTACC
CGCCCCAACTCCGGAGACTGCCACTGCCATGGCCGGCGGGGCACCTCTCATGGCGCCCGC
AGCCCCAGGCGCCGACGACGGCGCCTGCGCCGGTGCATTCGGATTGGACCCTTGCACCTG
GTTGGCGCTCGGTGCTCCCATCAGCATCTCCTCCATGGGCTTCACCAGCCCTAGCCCCTG
AGGATACAGATACACGCATAGTGCAGCACTTGATCAATCACAAGTTGAGAATAGACGATG
ATCAACACAAGACACTACTACATGCCAAGCCAGCTAACACCTAGAGCAAGCAAGAACAAA
GTGAAGAAAAACAGCATGCGGTGAGCATGCACTGGTAAGGGGGGAGGCTGTGGCCTGTGG
GGGTGGGGGTGTCAAGAATCTCTACGGTGCAACTAAGAACCAAGCAAAAGGATACAAAGG
GGAGATTAGAGGCAGCAGGAAAGGCAAAGGAAAAGGTGATAAGGGGAAGAAGAAGAAAAG
ATGAAAGAGAAACACACCACCACACAAAAACACAACTTTGCTTGTGCTGTTGTAGGGTTG
TAGTACTGCCACACATCACCAGGACATGGCTGCTCCTCTCCTCTTTTGATGCAAGGCAAG
GAGAGAGAAGAAAAGCTATGAGAAAGGAAGGGGGGAGGTGAGGTGAGGGGATAAAAAGGA
TGATGGTGAGGAAAGGGGGATTAGAAAGAGGGGAAAAGAAAGGTGATGGTGTGTGCTTTC
ATGGATCGGATCAAAAGGGGGAGGGCAGCAGAGGATTAAAGCCAGCCACCGGGGGCTCAC
CTTCACCTTAAAGCCTATGGAGAAGAGAGAGGGGGGTGCTGATTATGCTCCAGATGCATA
GATCTACACAAAGCATAACATATAAAGGAAGAACAAGACCCAAGAGGATACCCACACACA
GAGAGATCATGGTCTCATCAAAGAAAGCGCGCACACACCAAGAACCATGACACGGAGAGG
AGGATGAACAGACAGCGGCAAGATCAAGGGGAACAAAAGCCAAACTCACACAAAGAGATT
TACCTGGGGCCAGTGGGCTGCATCCATGCAAGGACCTTGGCTAACCGCCCAAACAATTCT
TGCTCCGGAAATCTGATGAAGACGAGGAGGAAGACGACGGCCGGCAGGACGACGAAGAGG
AGCTCCTCTCCTGCTGCTTGCTTGCTTCCGGTGGATTTCTTGAGCGGAGGGGAGAGAGCA
GGAGGAGGAAGGCGCTGCGGTTGGCCAGTGAGTGGAATTGTCCCTCCTATGTCTGCAACC
CACATACGTTTTGCTCAAATAGCTAGGCTAGTAGTGGATTCCCTCTTCTTTTTTTTTAAT
ATTTCCATATGCCTCTCACAGCTGCCGGAAACTCGGCAAGGGGAGGGGGGCTGGAGCGCA
GATCGATCGATGCGCGACTGCGAGGGGAGGAAGCGGATGGGGAGGTGGAGGTGGAGGAGG
AGGGGCTGCGTTCTTGCTCGATCGGAGGCCGGGGGCTGTGGGAGTGGGCGGTCAACCGGC
CGAGATTCCATCGACCATTGTAAGGGAAGGCACCGCACGACGCAGCACCAAGGGAGGAAG
CCCTGAGAATGGCGGTTTGGTGGGGGCCAAGCGCTCGCACGTGCCGGCAACACGGCGTTC
TAAATTCCCCGGCCGTCACTGTGTGGTGCAACCTTTACTTCTTTTCCTTTCTATTACGCG
ACAGTGCACCTGCCCCTTTGTTTTCAGTCTACAGGATAATTCGTTTCAACGCCGCAGCGA
CCGAACCACCCATGTTGCCGTCGGCCGTGGCTACAAATTTTGTATACATGTGCATAAGAA
TTCTACCTCAAGAAACAAATTGTACTCGACCATATGCCTGTGAAGATTTATATGGCCAAT
TAAGATAGACTCTGTATTATAATTAGGAATGAAAACTATAAATATGCCACAAAACATCCC
ACCGTCGAATTTACCACGTTAGCGAGCACGTGGGATGAAGTGTTGAGAGGTTTTCTGCAC
CAGCCTTGCCCGAACCTTAATTTTCCACCATCGGTCAAAATTAGACCGTGTTTGCTCATC
ATGACTTCTTTTGAATTTAGGTTTTCATAACTCTAGTTTTTTTTAGAATCAATGGAAGAT
GATATCATGAGATTCCAATTTTATGTTGTTTTCTTTTTCGCATGCCCACTCTTCCAAATC
AAACTTGCATGCATTCCATACGAACAAACTTGGGCTAAAGTAGTGGACTTCAATAACCGA
ATCTCACTTAAGCTGCAACGTTGTTGTGCGATACAATTGTCCTTGTGCCCCCATGTGTTT
GAGGCCTACGTACGACGATCCTTCATATTTAGGGAGGGAAATCTGCATTCCTTCTCTGGT
CAGGTCATCCCACTAAGGCCCTGTTTGATAACAAAGTAGTAAAAAAACTAAAGTATTAAA
AACTGCAGTAATTTTACGTGTAGATAAAAAATACCATGGTTTTAATATAACAATATTTTT
TGCAGTATTCACAATATAGAGAAACCGTTTGATTACGCCACATATTACTGTAAAATTTAT
CAGTTATATATTTTGCTACACTTTCATACCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGTCTGTTGATGTCTTTTTTTGCAGGGACT